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The map label for this gene is uidR [C]

Identifier: 119773241

GI number: 119773241

Start: 112290

End: 112925

Strand: Reverse

Name: uidR [C]

Synonym: Sama_0099

Alternate gene names: 119773241

Gene position: 112925-112290 (Counterclockwise)

Preceding gene: 119773243

Following gene: 119773240

Centisome position: 2.62

GC content: 49.53

Gene sequence:

>636_bases
ATGAAAACCCGCGACAAAATCATTCAGGCCAGCCTGGAGCTCTTTAACGAGCATGGCGAGCGCACCATTACGACCAATCA
TATCGCTGCCCATCTGGATATCAGCCCCGGCAACCTCTATTACCACTTCCGAAACAAGGAAGACATTATCCGTTGCATCT
TCGACCAGTACGAACAGCACCTGTTGCTGGGCTTTAAGCCCTATGCGGATCAAAAGGTCGACCTTGAACTGCTGATGAGC
TATTTCGATGCCATGTTCTACACCATGTGGCAGTTCCGTTTTATGTACGCCAACCTGGCAGACATTCTCGCCCGCGATGA
CACTCTCAAGGCACGTTATCTCAAGGTACAACAAGCCGTGCTGGAACAGTCGATTGCCGTTCTCAATCAATTGAAAAAGG
ATGGTATTTTACAAATCGAAGACGAGCGCATTGCCGATTTGGCCGACACCATCAAGATGATTATCGGCTTTTGGATCAGC
TACAAGCTGACCCAATCCAGCATTGCCACCATCAGCAAGGCATCGCTTTACGAAGGTCTGTTACGGGTACTGATGATTTT
CAAGGCCTACTCCACCCCGGATTCACTGGCCAACTTCGACCGTCTCGAGCAGCATTTTCGCTCTCAATCCAACTGA

Upstream 100 bases:

>100_bases
GCCTGATGAATTACGGCAATGTTAACATAAGCCGGGAAGCAGGAATAAGCACAGAGCGATTAGCCAGGAAGCGGCGCGCC
ATAATAAAGACAGGATACCA

Downstream 100 bases:

>100_bases
TACAGGCCACCCCCCTTCTCCTCTGACCCACTCGATGTTCCGGTGACATTTTCAGTGTCACCGGACTACAATCAAACAAT
ATCCGCGCGGCACTCCCCAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator Tetr Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKTRDKIIQASLELFNEHGERTITTNHIAAHLDISPGNLYYHFRNKEDIIRCIFDQYEQHLLLGFKPYADQKVDLELLMS
YFDAMFYTMWQFRFMYANLADILARDDTLKARYLKVQQAVLEQSIAVLNQLKKDGILQIEDERIADLADTIKMIIGFWIS
YKLTQSSIATISKASLYEGLLRVLMIFKAYSTPDSLANFDRLEQHFRSQSN

Sequences:

>Translated_211_residues
MKTRDKIIQASLELFNEHGERTITTNHIAAHLDISPGNLYYHFRNKEDIIRCIFDQYEQHLLLGFKPYADQKVDLELLMS
YFDAMFYTMWQFRFMYANLADILARDDTLKARYLKVQQAVLEQSIAVLNQLKKDGILQIEDERIADLADTIKMIIGFWIS
YKLTQSSIATISKASLYEGLLRVLMIFKAYSTPDSLANFDRLEQHFRSQSN
>Mature_211_residues
MKTRDKIIQASLELFNEHGERTITTNHIAAHLDISPGNLYYHFRNKEDIIRCIFDQYEQHLLLGFKPYADQKVDLELLMS
YFDAMFYTMWQFRFMYANLADILARDDTLKARYLKVQQAVLEQSIAVLNQLKKDGILQIEDERIADLADTIKMIIGFWIS
YKLTQSSIATISKASLYEGLLRVLMIFKAYSTPDSLANFDRLEQHFRSQSN

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24707; Mature: 24707

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRDKIIQASLELFNEHGERTITTNHIAAHLDISPGNLYYHFRNKEDIIRCIFDQYEQH
CCHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
LLLGFKPYADQKVDLELLMSYFDAMFYTMWQFRFMYANLADILARDDTLKARYLKVQQAV
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEQSIAVLNQLKKDGILQIEDERIADLADTIKMIIGFWISYKLTQSSIATISKASLYEGL
HHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRVLMIFKAYSTPDSLANFDRLEQHFRSQSN
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTRDKIIQASLELFNEHGERTITTNHIAAHLDISPGNLYYHFRNKEDIIRCIFDQYEQH
CCHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
LLLGFKPYADQKVDLELLMSYFDAMFYTMWQFRFMYANLADILARDDTLKARYLKVQQAV
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LEQSIAVLNQLKKDGILQIEDERIADLADTIKMIIGFWISYKLTQSSIATISKASLYEGL
HHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRVLMIFKAYSTPDSLANFDRLEQHFRSQSN
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA