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The map label for this gene is yihI [H]

Identifier: 119773231

GI number: 119773231

Start: 100286

End: 100822

Strand: Reverse

Name: yihI [H]

Synonym: Sama_0089

Alternate gene names: 119773231

Gene position: 100822-100286 (Counterclockwise)

Preceding gene: 119773232

Following gene: 119773230

Centisome position: 2.34

GC content: 55.31

Gene sequence:

>537_bases
ATGACCCGTATCAAGAAGACACGTAAAGCTGGCGGAACAGCCCCCAAGCAGGCACCTCGCACCCCCAAGTCCGAGCGAGT
GCCAACTTCAAAAAAACGCGACACCGGTAATAAGTCCGGTAGCCGCCAGAACCCAGGCACCGAAAAGCAAGGTAACCGCA
GTGGCAAGGGCAAACAGGACCCACGTCTTGGCAGTAAAAAGCCCGTGGCATTGGAACTGGCGCCGCAAACTCAGCCTCAG
GTGAAGGCTCCCAAGCCAAAACAGCCAAAACTAAGCGATGAGCAACTGCTGCTCAAACTCGAAGAAGACCCACGTCTTAA
CGAGCTGCTCGATCGCCTGGAAGAAGGCCGGGTCCTGGGCGCCGAGGATCAGCGCTGGCTCGACGAGCAGTTATCCAAAA
TTGAAGCCCTGATGGAAAAACTGGGTATCACTGATATTGACGAAGCTCAGGGCGAAGACAGCGATGACGATGATGCCCTG
TTGGCCCGATTCGAATCCGGCGCCGATGTGTTAAAGCAATACCAGGACAAAGACTGA

Upstream 100 bases:

>100_bases
CCTGATGCAAAAACCATCGGGATCTGATATAAAACGCGACCCAAATTCATGCCCTGCCCTGTGAGCCGGGCTGTTCAAGG
CACTTCGGAGTTAGAGACCC

Downstream 100 bases:

>100_bases
GAATAAAGGAGCGACCATGCCAACCTTGCTTATCGTTTTGGGTACGCTGATTGTACTGGTCCTCGCCGCCTATGCGGCAA
GCCTGCTGTGGAAGCTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTRIKKTRKAGGTAPKQAPRTPKSERVPTSKKRDTGNKSGSRQNPGTEKQGNRSGKGKQDPRLGSKKPVALELAPQTQPQ
VKAPKPKQPKLSDEQLLLKLEEDPRLNELLDRLEEGRVLGAEDQRWLDEQLSKIEALMEKLGITDIDEAQGEDSDDDDAL
LARFESGADVLKQYQDKD

Sequences:

>Translated_178_residues
MTRIKKTRKAGGTAPKQAPRTPKSERVPTSKKRDTGNKSGSRQNPGTEKQGNRSGKGKQDPRLGSKKPVALELAPQTQPQ
VKAPKPKQPKLSDEQLLLKLEEDPRLNELLDRLEEGRVLGAEDQRWLDEQLSKIEALMEKLGITDIDEAQGEDSDDDDAL
LARFESGADVLKQYQDKD
>Mature_177_residues
TRIKKTRKAGGTAPKQAPRTPKSERVPTSKKRDTGNKSGSRQNPGTEKQGNRSGKGKQDPRLGSKKPVALELAPQTQPQV
KAPKPKQPKLSDEQLLLKLEEDPRLNELLDRLEEGRVLGAEDQRWLDEQLSKIEALMEKLGITDIDEAQGEDSDDDDALL
ARFESGADVLKQYQDKD

Specific function: A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis [H]

COG id: COG3078

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YihI family [H]

Homologues:

Organism=Escherichia coli, GI1790297, Length=109, Percent_Identity=42.2018348623853, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007336 [H]

Pfam domain/function: PF04220 DUF414 [H]

EC number: NA

Molecular weight: Translated: 19806; Mature: 19675

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIKKTRKAGGTAPKQAPRTPKSERVPTSKKRDTGNKSGSRQNPGTEKQGNRSGKGKQD
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRLGSKKPVALELAPQTQPQVKAPKPKQPKLSDEQLLLKLEEDPRLNELLDRLEEGRVLG
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHCCEEC
AEDQRWLDEQLSKIEALMEKLGITDIDEAQGEDSDDDDALLARFESGADVLKQYQDKD
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCC
>Mature Secondary Structure 
TRIKKTRKAGGTAPKQAPRTPKSERVPTSKKRDTGNKSGSRQNPGTEKQGNRSGKGKQD
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRLGSKKPVALELAPQTQPQVKAPKPKQPKLSDEQLLLKLEEDPRLNELLDRLEEGRVLG
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCHHHHHHHHHHCCEEC
AEDQRWLDEQLSKIEALMEKLGITDIDEAQGEDSDDDDALLARFESGADVLKQYQDKD
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]