Click here to switch to the map view.

The map label for this gene is pldB [H]

Identifier: 119773225

GI number: 119773225

Start: 92823

End: 93776

Strand: Reverse

Name: pldB [H]

Synonym: Sama_0083

Alternate gene names: 119773225

Gene position: 93776-92823 (Counterclockwise)

Preceding gene: 119773226

Following gene: 119773222

Centisome position: 2.18

GC content: 57.23

Gene sequence:

>954_bases
ATGCATACACCAGCTTTGAATACATCTTTGACAATTCCACCTGCCCTTAAGGCGCTGTATCAGCGCTGTGAGCTGGGCAG
CCTCGCCACCAGCCCCGGCGTCGACATCGCCTGGCTGGCACTGGAACACCCCAGTCCTAAGGGCAGCATTGTTTTTTCCA
ATGGCCGGGTTGAGGCCTTTCTCAAGTATCTGGAGCTGTACCAGGATTTTTATGACGCTGGCTACAGTGTCTACGCACTG
GACCATCGCGGTCAGGGTCTATCGAGCCGTCTTACGCCCAACCGCCATATGGGCCATGTGGCGCACTTCAGTGACTATGT
CACTGACTTCAATCATTTTATAGACCAGGTTGTGCGCCCCCGAGCCAAAGCGCCGCTGTTTCTGGCTGGCCACTCCATGG
GCGGCGCCATAGGCACCCTGTATTTGCAGGCGCATTCGGGCCTCTTCAGTGCCGCCTGTTTCTCGGCCCCCATGTACGGC
ATCTGCCTGCCCATGAACAAGGTGTTTGTGCGCTGGCTGGCGCAAAAGCTGGATGCCAGCGCTAAAGGGCTACCCAACTA
CATTCTCGGGGGCAAGGACTATCATCCGGCCCCCTTTGCCAAAAACGACCTCACCAAAAGCGAGGCCCGTTATCAGGCCT
ACCGCGAGCTCTATGAGCAAAACCCGCAATTGCAACTGGGCTCGCCCACCAACCGCTGGCTGCTGGAAGCATTGGATGCC
TGTGACGAAGCGGTATTGGCGGCGCGGGAGAGCAAAATCCCTTTGCTGGTGTTGCAGGCGAGTGAAGACACCATAGTTGA
CAACAAAGCCCAGAACAGGGCCATGGGTGGACTGTGCGAATGCTTGCAGATTAACGACGCCCGCCATGAGATTTTGATGG
AATGCGACGGCCCACGCACCAAGGCGATAGAGGCGATGCTGGGCTTTTTTGCCAGCCATGCCAAGCAGCGCTGA

Upstream 100 bases:

>100_bases
CTGTCGGTGCTGGAGCAGCAAATCAACGACTTTATCGCCGCCGCCAAAGCGGCCTGAACCCAGTCCGGGGCCGCTGGCCC
CGGCATTTTTATCAGATCGC

Downstream 100 bases:

>100_bases
TATGCAGGCCTGATATCTTCAGGCCGCGTCTTGCCAAACCTTGATTTGGTGCGTCAGCTACGGCGACTGGCGCTTTGGGC
GCTGGGGGCGATACGCCGTG

Product: alpha/beta hydrolase fold domain-containing protein

Products: NA

Alternate protein names: Lecithinase B [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MHTPALNTSLTIPPALKALYQRCELGSLATSPGVDIAWLALEHPSPKGSIVFSNGRVEAFLKYLELYQDFYDAGYSVYAL
DHRGQGLSSRLTPNRHMGHVAHFSDYVTDFNHFIDQVVRPRAKAPLFLAGHSMGGAIGTLYLQAHSGLFSAACFSAPMYG
ICLPMNKVFVRWLAQKLDASAKGLPNYILGGKDYHPAPFAKNDLTKSEARYQAYRELYEQNPQLQLGSPTNRWLLEALDA
CDEAVLAARESKIPLLVLQASEDTIVDNKAQNRAMGGLCECLQINDARHEILMECDGPRTKAIEAMLGFFASHAKQR

Sequences:

>Translated_317_residues
MHTPALNTSLTIPPALKALYQRCELGSLATSPGVDIAWLALEHPSPKGSIVFSNGRVEAFLKYLELYQDFYDAGYSVYAL
DHRGQGLSSRLTPNRHMGHVAHFSDYVTDFNHFIDQVVRPRAKAPLFLAGHSMGGAIGTLYLQAHSGLFSAACFSAPMYG
ICLPMNKVFVRWLAQKLDASAKGLPNYILGGKDYHPAPFAKNDLTKSEARYQAYRELYEQNPQLQLGSPTNRWLLEALDA
CDEAVLAARESKIPLLVLQASEDTIVDNKAQNRAMGGLCECLQINDARHEILMECDGPRTKAIEAMLGFFASHAKQR
>Mature_317_residues
MHTPALNTSLTIPPALKALYQRCELGSLATSPGVDIAWLALEHPSPKGSIVFSNGRVEAFLKYLELYQDFYDAGYSVYAL
DHRGQGLSSRLTPNRHMGHVAHFSDYVTDFNHFIDQVVRPRAKAPLFLAGHSMGGAIGTLYLQAHSGLFSAACFSAPMYG
ICLPMNKVFVRWLAQKLDASAKGLPNYILGGKDYHPAPFAKNDLTKSEARYQAYRELYEQNPQLQLGSPTNRWLLEALDA
CDEAVLAARESKIPLLVLQASEDTIVDNKAQNRAMGGLCECLQINDARHEILMECDGPRTKAIEAMLGFFASHAKQR

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994980, Length=277, Percent_Identity=36.8231046931408, Blast_Score=189, Evalue=3e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.5 [H]

Molecular weight: Translated: 35044; Mature: 35044

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTPALNTSLTIPPALKALYQRCELGSLATSPGVDIAWLALEHPSPKGSIVFSNGRVEAF
CCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCHHHH
LKYLELYQDFYDAGYSVYALDHRGQGLSSRLTPNRHMGHVAHFSDYVTDFNHFIDQVVRP
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCC
RAKAPLFLAGHSMGGAIGTLYLQAHSGLFSAACFSAPMYGICLPMNKVFVRWLAQKLDAS
CCCCCEEEECCCCCCHHEEEEEECCCCHHHHHHHHCCHHHEECCHHHHHHHHHHHHHCCC
AKGLPNYILGGKDYHPAPFAKNDLTKSEARYQAYRELYEQNPQLQLGSPTNRWLLEALDA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHH
CDEAVLAARESKIPLLVLQASEDTIVDNKAQNRAMGGLCECLQINDARHEILMECDGPRT
HHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCCHH
KAIEAMLGFFASHAKQR
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHTPALNTSLTIPPALKALYQRCELGSLATSPGVDIAWLALEHPSPKGSIVFSNGRVEAF
CCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCHHHH
LKYLELYQDFYDAGYSVYALDHRGQGLSSRLTPNRHMGHVAHFSDYVTDFNHFIDQVVRP
HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCC
RAKAPLFLAGHSMGGAIGTLYLQAHSGLFSAACFSAPMYGICLPMNKVFVRWLAQKLDAS
CCCCCEEEECCCCCCHHEEEEEECCCCHHHHHHHHCCHHHEECCHHHHHHHHHHHHHCCC
AKGLPNYILGGKDYHPAPFAKNDLTKSEARYQAYRELYEQNPQLQLGSPTNRWLLEALDA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHH
CDEAVLAARESKIPLLVLQASEDTIVDNKAQNRAMGGLCECLQINDARHEILMECDGPRT
HHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCCHH
KAIEAMLGFFASHAKQR
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]