Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yeiW [C]

Identifier: 119773197

GI number: 119773197

Start: 61309

End: 61560

Strand: Direct

Name: yeiW [C]

Synonym: Sama_0055

Alternate gene names: 119773197

Gene position: 61309-61560 (Clockwise)

Preceding gene: 119773195

Following gene: 119773198

Centisome position: 1.42

GC content: 53.57

Gene sequence:

>252_bases
GTGGAATGTCGTTTGGGTTGTGGTGCCTGCTGTATCGCCCCCTCTATCAGTAGCCCCATTCCGGGGATGCCTGATGGTAA
GCCCGCTGGTGTGCGTTGTGTTCAGCTAAGCGATGACAACCTGTGCCTTATCTTCGGCCACGCCGACAGGCCTGACGTCT
GTTGTGACTTTAAAGCCACGAGAGATGTATGTGGCAGCAACAATGCCGAAGCACTTTGGATTATTACTTCCCTCGAGACA
CAAACCAGCTGA

Upstream 100 bases:

>100_bases
GCTTTACCGCTCGATTATTTCAATTGCGTGCGGCAGTTGGCACTATTGCGGTTCAGAACTGAGTGAATTTGCTTTCATCG
GTATAATCGGAGAAACGGAA

Downstream 100 bases:

>100_bases
TTGTAGGTGAGCTAAATGCAACTGACCCGCTATACGGATTTTGGGATTCGCACCCTGATGTATATGGCTGTTCAACCTGA
GCGGACAGCCCTGTTCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKATRDVCGSNNAEALWIITSLET
QTS

Sequences:

>Translated_83_residues
MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKATRDVCGSNNAEALWIITSLET
QTS
>Mature_83_residues
MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKATRDVCGSNNAEALWIITSLET
QTS

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0153 family [H]

Homologues:

Organism=Escherichia coli, GI87082060, Length=83, Percent_Identity=53.0120481927711, Blast_Score=93, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 8747; Mature: 8747

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
13.3 %Cys+Met (Translated Protein)
10.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
13.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKAT
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCCC
RDVCGSNNAEALWIITSLETQTS
CHHCCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MECRLGCGACCIAPSISSPIPGMPDGKPAGVRCVQLSDDNLCLIFGHADRPDVCCDFKAT
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCCC
RDVCGSNNAEALWIITSLETQTS
CHHCCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]