Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is nudH [C]

Identifier: 119773159

GI number: 119773159

Start: 16992

End: 17393

Strand: Reverse

Name: nudH [C]

Synonym: Sama_0017

Alternate gene names: 119773159

Gene position: 17393-16992 (Counterclockwise)

Preceding gene: 119773160

Following gene: 119773154

Centisome position: 0.4

GC content: 52.99

Gene sequence:

>402_bases
ATGGCTTTCGACGATACCTTCCGCTTGAGCAGCCACGCGGTGATCACCAACGACAAAAATAACGTGCTGCTACTTAAAGC
TGACTATGGCAATAAGCATTGGGGCCTACCCGGCGGAGCCTTGGAACCGGGCGAAACCATACATCAGGCGCTGATACGTG
AATGTTTGGAGGAGCTCGGCCAGCTGGTCGCAATCGACTACCTGAGCGGTGTGTATTTTCACTCGGCTTACAATTCACAG
GCCTTTATCTTTCGCGCCCGCCTGACAAGCCCGAATATCATCCTGAGCCCAGAGCACAGTGAATATGGTTTCTTCGTCCC
AGACAGCCTACATGCAGTGCAGCAACGCAGGATTAGCGAGTGCCTCGACTTTAACGGCAAGGTAGTCAGTGCCGCTTTTT
GA

Upstream 100 bases:

>100_bases
CTATGGCGTTGGAAACCGTTATCCACGGTCTGCGACTGATGCTGGCCACCGCTGTCACCACAGCCACCGATATCCACGAG
AGCGCCGGAGTCACCCACTG

Downstream 100 bases:

>100_bases
TCGCTATGGCTGACAATCCTCTCTTGCACTGTGATAAAAACACCAATGCAAGGAACAAAAAAGGAAAGCCGCAGCTTTCC
TTTTTTTCTTCCGAACCGGA

Product: MutT/nudix family protein

Products: NA

Alternate protein names: MutT/Nudix Family Protein; MutT-Like Protein

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MAFDDTFRLSSHAVITNDKNNVLLLKADYGNKHWGLPGGALEPGETIHQALIRECLEELGQLVAIDYLSGVYFHSAYNSQ
AFIFRARLTSPNIILSPEHSEYGFFVPDSLHAVQQRRISECLDFNGKVVSAAF

Sequences:

>Translated_133_residues
MAFDDTFRLSSHAVITNDKNNVLLLKADYGNKHWGLPGGALEPGETIHQALIRECLEELGQLVAIDYLSGVYFHSAYNSQ
AFIFRARLTSPNIILSPEHSEYGFFVPDSLHAVQQRRISECLDFNGKVVSAAF
>Mature_132_residues
AFDDTFRLSSHAVITNDKNNVLLLKADYGNKHWGLPGGALEPGETIHQALIRECLEELGQLVAIDYLSGVYFHSAYNSQA
FIFRARLTSPNIILSPEHSEYGFFVPDSLHAVQQRRISECLDFNGKVVSAAF

Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 14843; Mature: 14712

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDDTFRLSSHAVITNDKNNVLLLKADYGNKHWGLPGGALEPGETIHQALIRECLEELG
CCCCCCEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QLVAIDYLSGVYFHSAYNSQAFIFRARLTSPNIILSPEHSEYGFFVPDSLHAVQQRRISE
HHHHHHHHHCEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCEECCCHHHHHHHHHHHH
CLDFNGKVVSAAF
HHCCCCEEEEEEC
>Mature Secondary Structure 
AFDDTFRLSSHAVITNDKNNVLLLKADYGNKHWGLPGGALEPGETIHQALIRECLEELG
CCCCCEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QLVAIDYLSGVYFHSAYNSQAFIFRARLTSPNIILSPEHSEYGFFVPDSLHAVQQRRISE
HHHHHHHHHCEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCEECCCHHHHHHHHHHHH
CLDFNGKVVSAAF
HHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA