| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is deaD [H]
Identifier: 119718818
GI number: 119718818
Start: 4875022
End: 4876791
Strand: Reverse
Name: deaD [H]
Synonym: Noca_4601
Alternate gene names: 119718818
Gene position: 4876791-4875022 (Counterclockwise)
Preceding gene: 119718819
Following gene: 119718817
Centisome position: 97.81
GC content: 71.53
Gene sequence:
>1770_bases GTGAGCAGCGACGAGCAGGACGACACGACCACCCCCGAGGTGACGTTCGCCGACCTCGGGCTCAGCGACCAGGTGCTGAA GGCGCTGGCCGACGTCGGGTACGAGAAGCCCTCCGCGATCCAGGCCGCCACGATCCCACCGCTCCTGGCCGGCCGTGACG TCGTCGGCCTCGCGCAGACCGGCACCGGCAAGACCGCGGCGTTCGCGCTGCCGATCCTCTCTCGGCTGGACCTCACGCAG ACGACGCCGCAGGCGCTGGTGCTGGCGCCGACCCGCGAGCTCGCGCTCCAGGTCTGCGAGGCGTTCGAGCGGTACGCCGC GCACGTCAAGGGCGTGCACGTGCTGCCGGTGTACGGCGGGCAGGGCTACGGCGTCCAGCTCAGCGCGCTGCGTCGCGGCG TGCACGTCGTCGTCGGCACCCCCGGCCGGATCATGGACCACCTGGAGAAGGGCACGCTCGACCTGTCCGAGCTGCGCTTC CTGGTCCTCGACGAGGCCGACGAGATGCTGAACATGGGCTTCGCCGAGGACGTCGAGACGATCCTGGCCGACACCCCCGA CGACAAGAACGTCGCGCTGTTCTCGGCCACGATGCCCGCGCAGATCCGCCGGATCTCGAAGAAGTACCTCGACGACCCCG CCGAGATCACCGTCAAGGGCAAGACGGCCACCGCCTCGAACATCACCCAGCGCTACCTGACGGTGTCCTACCCGCAGAAG GTCGACGCCCTCACCCGGATCCTCGAGGTCGAGAACTTCGAGGGCATGATCGTCTTCGTCCGCACCAAGAACGAGACCGA GACGCTGGCCGAGAAGCTCCGAGCCCGCGGCCTGTCCGCGATGGCGATCAACGGCGACGTCGCCCAGGCGCAGCGCGAAC GCACGGTCAACCAGCTGAAGTCGGGCAAGCTCGACATCCTGGTCGCCACCGACGTCGCCGCCCGCGGCCTGGACGTCGAA CGGATCAGCCACGTCGTGAACTACGACATCCCCACCGACACCGAGTCCTACGTGCACCGGATCGGGCGCACCGGGCGGGC CGGGCGCAGCGGCGACGCGATCTCGTTCGTCACCCCCCGCGAGCGCTACCTGCTCAAGCACATCGAGAAGGCGACCCGGC AGCCGCTGACCCAGATGCAGCTGCCCACCGTCGAGGACGTCAACAGCACCCGTCTGTCCCGCTTCGACGACGCGATCACC GAGGCGCTCTCGCAGACCCAGCGGATCGACGCGTTCCGCGACATCGTCGCCCACTACGTCCGCGAGCACGACGTGCCCGA GGCCGACGTCGCCGCGGCCCTCGCGGTGGTGGCCCAGGGGGAGACCCCGCTGCTGCTCGATCCGGCCGACCGCGCGAACG AGCTCCGGGCGCCCCGCGAGGAGCGCGCCGGCCAGGGCACCCGCCGGGACCGCCACGACCACGGCGGCCCCGGCGGCCAC GGCGGCCCGCCTCGCGAGCGCCGGCCCCGCGGGCGCAGCGACGTCCCGATGGCGACGTACCGGATCGCGGTGGGCAAGCG ACACAAGGTCGAGCCTCGCCAGATCGTCGGGGCGATCGCCAACGAGGGCGGCCTGTCGCGCCAGGACTTCGGGCACATCG ACATCCGCGGCGACCACTCGCTGGTCGAGCTGCCCGCCGACCTCCCGGCCGGCGCGTGGGACAGCCTGCGCTCGACCCGG ATCTCCGGGAAGCTGATCGAGCTCACCCGCGACGGCGGCGGCCCCGCGGCCGACACCCGACACAAGAAGCCCCGCCACAA GACCCGTTGA
Upstream 100 bases:
>100_bases GCGAAGAGCGTGACGGTCGAGTAGGTGGCCCCCGAGAGGTGACGCAGCGCACCGCGACGACGAATCCGCCGGTGGCCGCC GCACCCACTACCGTTGACGG
Downstream 100 bases:
>100_bases ATCGGGAGTTCCGCGCCTCGAGTCGGAAGTCCCGACTCGACATCGGGGGTGGGTCGGTGCGGGCTGGTAGAACCGACGGC ATGCGCCCGAGCCGCCGACT
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MSSDEQDDTTTPEVTFADLGLSDQVLKALADVGYEKPSAIQAATIPPLLAGRDVVGLAQTGTGKTAAFALPILSRLDLTQ TTPQALVLAPTRELALQVCEAFERYAAHVKGVHVLPVYGGQGYGVQLSALRRGVHVVVGTPGRIMDHLEKGTLDLSELRF LVLDEADEMLNMGFAEDVETILADTPDDKNVALFSATMPAQIRRISKKYLDDPAEITVKGKTATASNITQRYLTVSYPQK VDALTRILEVENFEGMIVFVRTKNETETLAEKLRARGLSAMAINGDVAQAQRERTVNQLKSGKLDILVATDVAARGLDVE RISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAISFVTPRERYLLKHIEKATRQPLTQMQLPTVEDVNSTRLSRFDDAIT EALSQTQRIDAFRDIVAHYVREHDVPEADVAAALAVVAQGETPLLLDPADRANELRAPREERAGQGTRRDRHDHGGPGGH GGPPRERRPRGRSDVPMATYRIAVGKRHKVEPRQIVGAIANEGGLSRQDFGHIDIRGDHSLVELPADLPAGAWDSLRSTR ISGKLIELTRDGGGPAADTRHKKPRHKTR
Sequences:
>Translated_589_residues MSSDEQDDTTTPEVTFADLGLSDQVLKALADVGYEKPSAIQAATIPPLLAGRDVVGLAQTGTGKTAAFALPILSRLDLTQ TTPQALVLAPTRELALQVCEAFERYAAHVKGVHVLPVYGGQGYGVQLSALRRGVHVVVGTPGRIMDHLEKGTLDLSELRF LVLDEADEMLNMGFAEDVETILADTPDDKNVALFSATMPAQIRRISKKYLDDPAEITVKGKTATASNITQRYLTVSYPQK VDALTRILEVENFEGMIVFVRTKNETETLAEKLRARGLSAMAINGDVAQAQRERTVNQLKSGKLDILVATDVAARGLDVE RISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAISFVTPRERYLLKHIEKATRQPLTQMQLPTVEDVNSTRLSRFDDAIT EALSQTQRIDAFRDIVAHYVREHDVPEADVAAALAVVAQGETPLLLDPADRANELRAPREERAGQGTRRDRHDHGGPGGH GGPPRERRPRGRSDVPMATYRIAVGKRHKVEPRQIVGAIANEGGLSRQDFGHIDIRGDHSLVELPADLPAGAWDSLRSTR ISGKLIELTRDGGGPAADTRHKKPRHKTR >Mature_588_residues SSDEQDDTTTPEVTFADLGLSDQVLKALADVGYEKPSAIQAATIPPLLAGRDVVGLAQTGTGKTAAFALPILSRLDLTQT TPQALVLAPTRELALQVCEAFERYAAHVKGVHVLPVYGGQGYGVQLSALRRGVHVVVGTPGRIMDHLEKGTLDLSELRFL VLDEADEMLNMGFAEDVETILADTPDDKNVALFSATMPAQIRRISKKYLDDPAEITVKGKTATASNITQRYLTVSYPQKV DALTRILEVENFEGMIVFVRTKNETETLAEKLRARGLSAMAINGDVAQAQRERTVNQLKSGKLDILVATDVAARGLDVER ISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAISFVTPRERYLLKHIEKATRQPLTQMQLPTVEDVNSTRLSRFDDAITE ALSQTQRIDAFRDIVAHYVREHDVPEADVAAALAVVAQGETPLLLDPADRANELRAPREERAGQGTRRDRHDHGGPGGHG GPPRERRPRGRSDVPMATYRIAVGKRHKVEPRQIVGAIANEGGLSRQDFGHIDIRGDHSLVELPADLPAGAWDSLRSTRI SGKLIELTRDGGGPAADTRHKKPRHKTR
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=357, Percent_Identity=42.8571428571429, Blast_Score=286, Evalue=5e-77, Organism=Homo sapiens, GI7661920, Length=379, Percent_Identity=38.5224274406332, Blast_Score=271, Evalue=2e-72, Organism=Homo sapiens, GI13129006, Length=391, Percent_Identity=39.1304347826087, Blast_Score=270, Evalue=2e-72, Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=36.8131868131868, Blast_Score=262, Evalue=8e-70, Organism=Homo sapiens, GI50659095, Length=393, Percent_Identity=37.9134860050891, Blast_Score=259, Evalue=6e-69, Organism=Homo sapiens, GI148613856, Length=380, Percent_Identity=38.4210526315789, Blast_Score=259, Evalue=7e-69, Organism=Homo sapiens, GI38201710, Length=380, Percent_Identity=38.4210526315789, Blast_Score=259, Evalue=7e-69, Organism=Homo sapiens, GI87196351, Length=377, Percent_Identity=38.9920424403183, Blast_Score=257, Evalue=3e-68, Organism=Homo sapiens, GI301171467, Length=377, Percent_Identity=38.9920424403183, Blast_Score=257, Evalue=3e-68, Organism=Homo sapiens, GI301171475, Length=377, Percent_Identity=38.9920424403183, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI169881239, Length=377, Percent_Identity=38.9920424403183, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI13514809, Length=377, Percent_Identity=38.9920424403183, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI4758138, Length=361, Percent_Identity=38.781163434903, Blast_Score=255, Evalue=1e-67, Organism=Homo sapiens, GI41327771, Length=396, Percent_Identity=36.6161616161616, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=38.7533875338753, Blast_Score=250, Evalue=2e-66, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=38.9645776566758, Blast_Score=248, Evalue=9e-66, Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=36.9747899159664, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI41327776, Length=357, Percent_Identity=39.2156862745098, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI45446747, Length=375, Percent_Identity=35.7333333333333, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI45446743, Length=375, Percent_Identity=35.7333333333333, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI222352149, Length=357, Percent_Identity=37.8151260504202, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI21071032, Length=367, Percent_Identity=36.5122615803815, Blast_Score=243, Evalue=5e-64, Organism=Homo sapiens, GI224593278, Length=393, Percent_Identity=37.4045801526718, Blast_Score=242, Evalue=8e-64, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=37.0473537604457, Blast_Score=242, Evalue=8e-64, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=37.0473537604457, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=37.0473537604457, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=37.0473537604457, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=36.5789473684211, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI21040371, Length=346, Percent_Identity=36.4161849710983, Blast_Score=238, Evalue=8e-63, Organism=Homo sapiens, GI4758112, Length=346, Percent_Identity=36.1271676300578, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI18375623, Length=346, Percent_Identity=36.1271676300578, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=35.8381502890173, Blast_Score=235, Evalue=9e-62, Organism=Homo sapiens, GI188035877, Length=369, Percent_Identity=34.9593495934959, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI164419743, Length=355, Percent_Identity=36.6197183098592, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI51094101, Length=355, Percent_Identity=36.6197183098592, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI13514831, Length=484, Percent_Identity=31.404958677686, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI41327779, Length=381, Percent_Identity=32.2834645669291, Blast_Score=202, Evalue=1e-51, Organism=Homo sapiens, GI256223453, Length=352, Percent_Identity=33.2386363636364, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=33.7988826815642, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI6005743, Length=358, Percent_Identity=33.5195530726257, Blast_Score=197, Evalue=3e-50, Organism=Homo sapiens, GI164419732, Length=371, Percent_Identity=31.8059299191375, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI62241022, Length=341, Percent_Identity=33.7243401759531, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI38327634, Length=432, Percent_Identity=30.0925925925926, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI38569505, Length=383, Percent_Identity=31.0704960835509, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38569503, Length=383, Percent_Identity=31.0704960835509, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI9506931, Length=443, Percent_Identity=28.8939051918736, Blast_Score=179, Evalue=9e-45, Organism=Homo sapiens, GI62241024, Length=322, Percent_Identity=33.2298136645963, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI17505907, Length=410, Percent_Identity=29.7560975609756, Blast_Score=173, Evalue=5e-43, Organism=Homo sapiens, GI256773275, Length=399, Percent_Identity=33.5839598997494, Blast_Score=163, Evalue=6e-40, Organism=Homo sapiens, GI4826686, Length=346, Percent_Identity=28.6127167630058, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI154759257, Length=440, Percent_Identity=27.7272727272727, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI20336298, Length=223, Percent_Identity=34.9775784753363, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=29.9065420560748, Blast_Score=119, Evalue=6e-27, Organism=Escherichia coli, GI87082221, Length=555, Percent_Identity=50.8108108108108, Blast_Score=510, Evalue=1e-145, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=41.5343915343915, Blast_Score=292, Evalue=5e-80, Organism=Escherichia coli, GI1787605, Length=336, Percent_Identity=42.2619047619048, Blast_Score=268, Evalue=5e-73, Organism=Escherichia coli, GI1790214, Length=367, Percent_Identity=39.5095367847411, Blast_Score=249, Evalue=4e-67, Organism=Escherichia coli, GI1788930, Length=368, Percent_Identity=39.4021739130435, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI48994977, Length=363, Percent_Identity=23.9669421487603, Blast_Score=71, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=39.6174863387978, Blast_Score=291, Evalue=9e-79, Organism=Caenorhabditis elegans, GI17555296, Length=404, Percent_Identity=40.0990099009901, Blast_Score=275, Evalue=4e-74, Organism=Caenorhabditis elegans, GI86570094, Length=362, Percent_Identity=41.1602209944751, Blast_Score=268, Evalue=6e-72, Organism=Caenorhabditis elegans, GI17510309, Length=368, Percent_Identity=40.4891304347826, Blast_Score=265, Evalue=6e-71, Organism=Caenorhabditis elegans, GI71995514, Length=368, Percent_Identity=40.4891304347826, Blast_Score=265, Evalue=6e-71, Organism=Caenorhabditis elegans, GI17510307, Length=368, Percent_Identity=40.4891304347826, Blast_Score=265, Evalue=6e-71, Organism=Caenorhabditis elegans, GI17507121, Length=386, Percent_Identity=37.0466321243523, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI71995724, Length=366, Percent_Identity=37.9781420765027, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=38.3202099737533, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI71995718, Length=385, Percent_Identity=35.8441558441558, Blast_Score=253, Evalue=3e-67, Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=37.434554973822, Blast_Score=248, Evalue=5e-66, Organism=Caenorhabditis elegans, GI17510559, Length=466, Percent_Identity=33.2618025751073, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI115533224, Length=378, Percent_Identity=37.5661375661376, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=34.8773841961853, Blast_Score=241, Evalue=9e-64, Organism=Caenorhabditis elegans, GI71982858, Length=346, Percent_Identity=35.5491329479769, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17552642, Length=368, Percent_Identity=36.9565217391304, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17507877, Length=385, Percent_Identity=35.0649350649351, Blast_Score=231, Evalue=6e-61, Organism=Caenorhabditis elegans, GI17507881, Length=377, Percent_Identity=34.7480106100796, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=36.1185983827493, Blast_Score=227, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17509811, Length=377, Percent_Identity=35.0132625994695, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17507945, Length=374, Percent_Identity=35.2941176470588, Blast_Score=224, Evalue=7e-59, Organism=Caenorhabditis elegans, GI115532548, Length=388, Percent_Identity=31.9587628865979, Blast_Score=208, Evalue=8e-54, Organism=Caenorhabditis elegans, GI115532546, Length=388, Percent_Identity=31.9587628865979, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71999644, Length=375, Percent_Identity=31.4666666666667, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71999646, Length=375, Percent_Identity=31.4666666666667, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17536099, Length=369, Percent_Identity=33.8753387533875, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17536101, Length=369, Percent_Identity=33.8753387533875, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI193208216, Length=422, Percent_Identity=32.7014218009479, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17536103, Length=372, Percent_Identity=34.1397849462366, Blast_Score=195, Evalue=7e-50, Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=31.304347826087, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=31.404958677686, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17505370, Length=439, Percent_Identity=29.6127562642369, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=31.413612565445, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI25148203, Length=420, Percent_Identity=28.5714285714286, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI71990816, Length=354, Percent_Identity=32.7683615819209, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17507641, Length=421, Percent_Identity=28.2660332541568, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=36.1809045226131, Blast_Score=144, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17556951, Length=376, Percent_Identity=26.063829787234, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI32564046, Length=409, Percent_Identity=28.1173594132029, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI25148291, Length=379, Percent_Identity=26.9129287598945, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148205, Length=346, Percent_Identity=27.1676300578035, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI71997889, Length=377, Percent_Identity=26.790450928382, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71987152, Length=102, Percent_Identity=42.156862745098, Blast_Score=99, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17557982, Length=409, Percent_Identity=24.9388753056235, Blast_Score=98, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6321856, Length=365, Percent_Identity=43.013698630137, Blast_Score=282, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6324217, Length=369, Percent_Identity=40.650406504065, Blast_Score=271, Evalue=3e-73, Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=38.4210526315789, Blast_Score=263, Evalue=6e-71, Organism=Saccharomyces cerevisiae, GI6320224, Length=360, Percent_Identity=36.3888888888889, Blast_Score=261, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6324778, Length=382, Percent_Identity=37.434554973822, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6321360, Length=386, Percent_Identity=37.5647668393782, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=356, Percent_Identity=35.6741573033708, Blast_Score=243, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6322912, Length=356, Percent_Identity=38.4831460674157, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6322323, Length=356, Percent_Identity=38.4831460674157, Blast_Score=237, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=37.2159090909091, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6324620, Length=382, Percent_Identity=34.5549738219895, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=34.4729344729345, Blast_Score=216, Evalue=6e-57, Organism=Saccharomyces cerevisiae, GI6323947, Length=430, Percent_Identity=33.2558139534884, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=409, Percent_Identity=33.4963325183374, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6322427, Length=374, Percent_Identity=33.6898395721925, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6319714, Length=377, Percent_Identity=31.2997347480106, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6320449, Length=374, Percent_Identity=33.1550802139037, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=423, Percent_Identity=30.0236406619385, Blast_Score=190, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6321111, Length=351, Percent_Identity=32.7635327635328, Blast_Score=181, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6321267, Length=382, Percent_Identity=31.6753926701571, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6320400, Length=391, Percent_Identity=29.156010230179, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6322876, Length=476, Percent_Identity=28.1512605042017, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6319618, Length=416, Percent_Identity=27.8846153846154, Blast_Score=140, Evalue=5e-34, Organism=Saccharomyces cerevisiae, GI6323306, Length=322, Percent_Identity=28.2608695652174, Blast_Score=132, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=371, Percent_Identity=24.5283018867925, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI24585582, Length=375, Percent_Identity=40.2666666666667, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=37.9781420765027, Blast_Score=269, Evalue=5e-72, Organism=Drosophila melanogaster, GI24584399, Length=367, Percent_Identity=39.2370572207085, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI28574962, Length=361, Percent_Identity=38.781163434903, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24642151, Length=363, Percent_Identity=37.7410468319559, Blast_Score=261, Evalue=9e-70, Organism=Drosophila melanogaster, GI24662330, Length=364, Percent_Identity=38.1868131868132, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI21355075, Length=368, Percent_Identity=38.3152173913043, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI18857967, Length=383, Percent_Identity=38.1201044386423, Blast_Score=255, Evalue=5e-68, Organism=Drosophila melanogaster, GI17977678, Length=366, Percent_Identity=38.2513661202186, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24582080, Length=375, Percent_Identity=38.4, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI24582078, Length=375, Percent_Identity=38.4, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI17136248, Length=375, Percent_Identity=38.4, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI24582075, Length=375, Percent_Identity=38.4, Blast_Score=252, Evalue=6e-67, Organism=Drosophila melanogaster, GI17985987, Length=408, Percent_Identity=37.0098039215686, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=36.5384615384615, Blast_Score=249, Evalue=4e-66, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=36.5384615384615, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI24644479, Length=397, Percent_Identity=36.0201511335013, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI281361218, Length=397, Percent_Identity=36.0201511335013, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI24644481, Length=397, Percent_Identity=36.0201511335013, Blast_Score=248, Evalue=6e-66, Organism=Drosophila melanogaster, GI24644487, Length=397, Percent_Identity=36.0201511335013, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI45551833, Length=397, Percent_Identity=36.0201511335013, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24644485, Length=397, Percent_Identity=36.0201511335013, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24644483, Length=397, Percent_Identity=36.0201511335013, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24584994, Length=395, Percent_Identity=35.6962025316456, Blast_Score=238, Evalue=1e-62, Organism=Drosophila melanogaster, GI21356161, Length=376, Percent_Identity=35.3723404255319, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24581954, Length=347, Percent_Identity=36.3112391930836, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI24581952, Length=347, Percent_Identity=36.3112391930836, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI24581956, Length=347, Percent_Identity=36.3112391930836, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI17136814, Length=389, Percent_Identity=37.5321336760925, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI281365720, Length=320, Percent_Identity=37.1875, Blast_Score=215, Evalue=8e-56, Organism=Drosophila melanogaster, GI28571808, Length=378, Percent_Identity=33.0687830687831, Blast_Score=208, Evalue=9e-54, Organism=Drosophila melanogaster, GI28571809, Length=378, Percent_Identity=33.0687830687831, Blast_Score=208, Evalue=9e-54, Organism=Drosophila melanogaster, GI28575014, Length=347, Percent_Identity=32.8530259365994, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI21355559, Length=413, Percent_Identity=32.9297820823245, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24642822, Length=382, Percent_Identity=29.8429319371728, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI28571338, Length=444, Percent_Identity=29.2792792792793, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI18859659, Length=444, Percent_Identity=29.2792792792793, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=29.5454545454545, Blast_Score=175, Evalue=8e-44, Organism=Drosophila melanogaster, GI24666101, Length=352, Percent_Identity=33.2386363636364, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI17647335, Length=380, Percent_Identity=28.6842105263158, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24668515, Length=341, Percent_Identity=29.0322580645161, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI19920478, Length=373, Percent_Identity=28.9544235924933, Blast_Score=143, Evalue=4e-34, Organism=Drosophila melanogaster, GI20130173, Length=372, Percent_Identity=28.2258064516129, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI17136666, Length=406, Percent_Identity=26.8472906403941, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24640164, Length=378, Percent_Identity=25.6613756613757, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI24646066, Length=412, Percent_Identity=22.0873786407767, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 64362; Mature: 64230
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDEQDDTTTPEVTFADLGLSDQVLKALADVGYEKPSAIQAATIPPLLAGRDVVGLAQT CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEECCCCCCHHCCCCEEEEECC GTGKTAAFALPILSRLDLTQTTPQALVLAPTRELALQVCEAFERYAAHVKGVHVLPVYGG CCCCHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEECC QGYGVQLSALRRGVHVVVGTPGRIMDHLEKGTLDLSELRFLVLDEADEMLNMGFAEDVET CCCCEEHHHHHCCCEEEECCCHHHHHHHHHCCCCHHHHHEEEECCHHHHHHCCCHHHHHH ILADTPDDKNVALFSATMPAQIRRISKKYLDDPAEITVKGKTATASNITQRYLTVSYPQK HHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHEEECCCHH VDALTRILEVENFEGMIVFVRTKNETETLAEKLRARGLSAMAINGDVAQAQRERTVNQLK HHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHH SGKLDILVATDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAISFVTPR CCCEEEEEECCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCH ERYLLKHIEKATRQPLTQMQLPTVEDVNSTRLSRFDDAITEALSQTQRIDAFRDIVAHYV HHHHHHHHHHHHHCCHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REHDVPEADVAAALAVVAQGETPLLLDPADRANELRAPREERAGQGTRRDRHDHGGPGGH HHCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCC GGPPRERRPRGRSDVPMATYRIAVGKRHKVEPRQIVGAIANEGGLSRQDFGHIDIRGDHS CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCC LVELPADLPAGAWDSLRSTRISGKLIELTRDGGGPAADTRHKKPRHKTR EEECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSDEQDDTTTPEVTFADLGLSDQVLKALADVGYEKPSAIQAATIPPLLAGRDVVGLAQT CCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCEECCCCCCHHCCCCEEEEECC GTGKTAAFALPILSRLDLTQTTPQALVLAPTRELALQVCEAFERYAAHVKGVHVLPVYGG CCCCHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEEECC QGYGVQLSALRRGVHVVVGTPGRIMDHLEKGTLDLSELRFLVLDEADEMLNMGFAEDVET CCCCEEHHHHHCCCEEEECCCHHHHHHHHHCCCCHHHHHEEEECCHHHHHHCCCHHHHHH ILADTPDDKNVALFSATMPAQIRRISKKYLDDPAEITVKGKTATASNITQRYLTVSYPQK HHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHEEECCCHH VDALTRILEVENFEGMIVFVRTKNETETLAEKLRARGLSAMAINGDVAQAQRERTVNQLK HHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHH SGKLDILVATDVAARGLDVERISHVVNYDIPTDTESYVHRIGRTGRAGRSGDAISFVTPR CCCEEEEEECCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCH ERYLLKHIEKATRQPLTQMQLPTVEDVNSTRLSRFDDAITEALSQTQRIDAFRDIVAHYV HHHHHHHHHHHHHCCHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REHDVPEADVAAALAVVAQGETPLLLDPADRANELRAPREERAGQGTRRDRHDHGGPGGH HHCCCCHHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCC GGPPRERRPRGRSDVPMATYRIAVGKRHKVEPRQIVGAIANEGGLSRQDFGHIDIRGDHS CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCC LVELPADLPAGAWDSLRSTRISGKLIELTRDGGGPAADTRHKKPRHKTR EEECCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]