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The map label for this gene is 119718744

Identifier: 119718744

GI number: 119718744

Start: 4785581

End: 4786810

Strand: Reverse

Name: 119718744

Synonym: Noca_4525

Alternate gene names: NA

Gene position: 4786810-4785581 (Counterclockwise)

Preceding gene: 119718745

Following gene: 119718743

Centisome position: 96.01

GC content: 68.46

Gene sequence:

>1230_bases
ATGGTTGTTCAGGCTGTTCCGGTCACGTTGTCGACGGTCGTCGTCGCGGTCGATGTTGGCAAGACTGAGTTCGCGTTCTC
GGTCACCGATGCCACCCGGACATTGCTCCTCAAGCCGCGGACCGGCTGCCCGATGACCGGGCCGTCGCTGGCACAGGTCG
TGGCCGACATCGCCCGGTTGCTCCCGATCGATGCGGTGGTCAAGGTCGGTATCGAGGCGGCCGGGCATTACCACCGGCCG
TTGCTGATGACAGGGGCGTGGCCGGGGACCTGGGAGGTGCTCGAGCTCAATCCGGGTCATGTCACCGAGCAGCGTCGGGT
GCTGGGCAAACGCACCATCAAGACCGACGTGATCGATCTTCAGGCGATGACCGAGCTGCTGCTGGCCGGTCGCGGTCAGC
CGGTCCGGGACCGCTCGCTGGTGTTCGGGGAGTTGACGGCGTGGTCGGCGCATCGGGTCGGCCGGGTGGCGTTGCGGACA
GCGACGAAGAACCAGCTGCTCGGACATCTGGACCGGACCTTCCCCGGGCTGACCCTGGCGCTGCCGAATGTGCTGGCCAC
CAAGGTCGGCCGGCTTGTCGCCACAGAGTTCCCCGATCCGGCACGGCTGGCCGCGTTGGGCAGCAGCCGGTTCATCCGCT
TCGGAGCGACCCGGGGCCTGCAGATCCGCCGGCCCGTGGCTGACAGGCTGGTCCAAGCCGCTCGCGATGCGTTGCCCACC
ACCGATGCAGCTGTCGCCCGCGCCGTCCTTGCCGCTGACCTCGCGCTGCTCGACGACCTGGACGCGCAAGTCGACCAGGC
CACCGAGCAGCTGGCTCGACTGCTGCCCCGTAGCCCGTTCGCGCCGCTGCTGACGGTCCCAGGATGGGGCGCGGTCCGGG
CCGGAAACTACGGCGGCGCCCTGGGGGACCCGGCCCGATTCGACAACCACCGGCAGATCTACCGCACCGCCGGACTCAAC
CCGATCCAGTACGAGTCCGCCGGAAGACGTCGCGACAGTGTCATCAGCCGCGAGGGCAGTGTCGAGCTGCGTCGCGCGCT
GATCGACCTGGGAGTGGGGTTGTGGCTCAGTGAGCCCGCCGCCAAGGTCTACGGTGCGCAGCTTCGTGACCGTGGCAAGA
AGGGTCTGGTCATCGCCTGCGCGATGGCCAACCGCGCGAACCGGATCGCGTTCGCTCTGGTCCGCGACCAGAGCACTTAC
GATCCCAGCAGGTGGATCCGGGAGGGCTGA

Upstream 100 bases:

>100_bases
ACACCTCCGGAGGTGCTTGGAAGGGACCGACAGGTTCTCTTCATCTGAGGGTCGGGCGTTGGCGCGCCGTGGCCTTCCGG
CGCCCCCGGAGGTGGGTCCA

Downstream 100 bases:

>100_bases
GGCCAGCACTTCACAACTCCGGCCGGTCGTGTCAGGCTCGTGGGCACGAAGGACCCGGACCAGACGCCGCATTCGCTATG
GCAGACGCCGCAAGACGTTA

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: ISChy2 Transposase

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MVVQAVPVTLSTVVVAVDVGKTEFAFSVTDATRTLLLKPRTGCPMTGPSLAQVVADIARLLPIDAVVKVGIEAAGHYHRP
LLMTGAWPGTWEVLELNPGHVTEQRRVLGKRTIKTDVIDLQAMTELLLAGRGQPVRDRSLVFGELTAWSAHRVGRVALRT
ATKNQLLGHLDRTFPGLTLALPNVLATKVGRLVATEFPDPARLAALGSSRFIRFGATRGLQIRRPVADRLVQAARDALPT
TDAAVARAVLAADLALLDDLDAQVDQATEQLARLLPRSPFAPLLTVPGWGAVRAGNYGGALGDPARFDNHRQIYRTAGLN
PIQYESAGRRRDSVISREGSVELRRALIDLGVGLWLSEPAAKVYGAQLRDRGKKGLVIACAMANRANRIAFALVRDQSTY
DPSRWIREG

Sequences:

>Translated_409_residues
MVVQAVPVTLSTVVVAVDVGKTEFAFSVTDATRTLLLKPRTGCPMTGPSLAQVVADIARLLPIDAVVKVGIEAAGHYHRP
LLMTGAWPGTWEVLELNPGHVTEQRRVLGKRTIKTDVIDLQAMTELLLAGRGQPVRDRSLVFGELTAWSAHRVGRVALRT
ATKNQLLGHLDRTFPGLTLALPNVLATKVGRLVATEFPDPARLAALGSSRFIRFGATRGLQIRRPVADRLVQAARDALPT
TDAAVARAVLAADLALLDDLDAQVDQATEQLARLLPRSPFAPLLTVPGWGAVRAGNYGGALGDPARFDNHRQIYRTAGLN
PIQYESAGRRRDSVISREGSVELRRALIDLGVGLWLSEPAAKVYGAQLRDRGKKGLVIACAMANRANRIAFALVRDQSTY
DPSRWIREG
>Mature_409_residues
MVVQAVPVTLSTVVVAVDVGKTEFAFSVTDATRTLLLKPRTGCPMTGPSLAQVVADIARLLPIDAVVKVGIEAAGHYHRP
LLMTGAWPGTWEVLELNPGHVTEQRRVLGKRTIKTDVIDLQAMTELLLAGRGQPVRDRSLVFGELTAWSAHRVGRVALRT
ATKNQLLGHLDRTFPGLTLALPNVLATKVGRLVATEFPDPARLAALGSSRFIRFGATRGLQIRRPVADRLVQAARDALPT
TDAAVARAVLAADLALLDDLDAQVDQATEQLARLLPRSPFAPLLTVPGWGAVRAGNYGGALGDPARFDNHRQIYRTAGLN
PIQYESAGRRRDSVISREGSVELRRALIDLGVGLWLSEPAAKVYGAQLRDRGKKGLVIACAMANRANRIAFALVRDQSTY
DPSRWIREG

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44229; Mature: 44229

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVQAVPVTLSTVVVAVDVGKTEFAFSVTDATRTLLLKPRTGCPMTGPSLAQVVADIARL
CCEEEECCEEEEEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
LPIDAVVKVGIEAAGHYHRPLLMTGAWPGTWEVLELNPGHVTEQRRVLGKRTIKTDVIDL
CCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
QAMTELLLAGRGQPVRDRSLVFGELTAWSAHRVGRVALRTATKNQLLGHLDRTFPGLTLA
HHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LPNVLATKVGRLVATEFPDPARLAALGSSRFIRFGATRGLQIRRPVADRLVQAARDALPT
HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEECCCCCCEEECHHHHHHHHHHHHCCCC
TDAAVARAVLAADLALLDDLDAQVDQATEQLARLLPRSPFAPLLTVPGWGAVRAGNYGGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEECCCCCCC
LGDPARFDNHRQIYRTAGLNPIQYESAGRRRDSVISREGSVELRRALIDLGVGLWLSEPA
CCCCCCCCCCHHHHHHCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH
AKVYGAQLRDRGKKGLVIACAMANRANRIAFALVRDQSTYDPSRWIREG
HHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCCCHHHHHCCC
>Mature Secondary Structure
MVVQAVPVTLSTVVVAVDVGKTEFAFSVTDATRTLLLKPRTGCPMTGPSLAQVVADIARL
CCEEEECCEEEEEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHH
LPIDAVVKVGIEAAGHYHRPLLMTGAWPGTWEVLELNPGHVTEQRRVLGKRTIKTDVIDL
CCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
QAMTELLLAGRGQPVRDRSLVFGELTAWSAHRVGRVALRTATKNQLLGHLDRTFPGLTLA
HHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LPNVLATKVGRLVATEFPDPARLAALGSSRFIRFGATRGLQIRRPVADRLVQAARDALPT
HHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEECCCCCCEEECHHHHHHHHHHHHCCCC
TDAAVARAVLAADLALLDDLDAQVDQATEQLARLLPRSPFAPLLTVPGWGAVRAGNYGGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEECCCCCCC
LGDPARFDNHRQIYRTAGLNPIQYESAGRRRDSVISREGSVELRRALIDLGVGLWLSEPA
CCCCCCCCCCHHHHHHCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCH
AKVYGAQLRDRGKKGLVIACAMANRANRIAFALVRDQSTYDPSRWIREG
HHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEECCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA