| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718724
Identifier: 119718724
GI number: 119718724
Start: 4764109
End: 4765080
Strand: Reverse
Name: 119718724
Synonym: Noca_4505
Alternate gene names: NA
Gene position: 4765080-4764109 (Counterclockwise)
Preceding gene: 119718726
Following gene: 119718715
Centisome position: 95.57
GC content: 75.31
Gene sequence:
>972_bases GTGGCAGAACGCGAGATCACGGCCCCGGTCGACCTCTGCCTGCCCGGCGGGCGACTGAACCCGGACGCGGTCGGCTGGTC GCGCCGGCCCCTGCACCGGGCGAACCTGCGTGGCTGGGGCCGCGCGAAGCGCTGGGAGTACTGGGGGATCGTCACGCCGC GGCTCTGCCTCGGGGTGGTCGCCTCCTCGCTCGACTACGCCGGGGTCTGCTCGGTGTGGGTGCTCGACCGCGCGACCGGG CGGACCTGGTCGCGCGACGAGGTGCCGCCGCTGGCCCGCGGCGTGTCCCTGCCCCCGGGCGTCGGCGGCCGCACCCTGGT CGAGGCCGGGCGGCTGCGGATCGAGCTGGCCGACGCCCCGGGCGGTGCCTCGGGGACCGTGGTGCGGGCGAGCGCGCCGG GGATCGAGGTCGACCTGGTCGTCGGGGCCGGCGGCGAGTGCGTCGGCGTGGTGGTGCCGTGGAGCGCGCGCCGCTTCCAG TACACCGTCAAGGACGTCGCCCGGCCCGTCACCGGCCGGGTCGTGCTCGAAGGGACGCCGTACGACGTGCACGCGGGGTG GGCGGTCCTCGACCACGGCCGCGGCAAGTGGCCCTACGCGATCACCTGGAACTGGGCGGCCGGCTCCTCGGAGCGGGTCG GCATCACGCTCGGTGGCCAGTGGACCGACGGCACCGGGTCGACCGAGAACGCACTGTTCGTCGACGGCCGCGCGCACAAG ATCGGCGAGCAGCTGACCTGGGAGTACGACCGCTCGGACTGGCGGCGGCCCTGGCGGATCCACGGGCCGCGGGTCGACGC GACGCTCGAGCCGTTCCACGAGCGGGTCGACCGGACCAACCTCGGAGTCGTCGCCAACCAGACCCACCAGTGCTTCGGCC ACTGGTCGGGATGGGCGAGCACCGACGGGGGTGAGCGGGTGTCGCTCGACGGGCTGGTCGGGTGGGCCGAGGAGGCGCGC AACCGCTGGTGA
Upstream 100 bases:
>100_bases CCAGCTCGCGCTCGTCGACGAAGGCGAGCGCGCGCAGCTCACGGTCGTTGAGATCGCGATAGGGCATGGGCGGAACGGTA ATCACTGGTAGACCTCCCCT
Downstream 100 bases:
>100_bases CCCGAGGTCGGTCCGGGGTGCTCAGCGCCCGGCCGCGTCCAGCGCCTCGGCGGTGAGGGTCCGGCCGAGCTCGATCATCT CCGCCGCGCGGTGGAACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAEREITAPVDLCLPGGRLNPDAVGWSRRPLHRANLRGWGRAKRWEYWGIVTPRLCLGVVASSLDYAGVCSVWVLDRATG RTWSRDEVPPLARGVSLPPGVGGRTLVEAGRLRIELADAPGGASGTVVRASAPGIEVDLVVGAGGECVGVVVPWSARRFQ YTVKDVARPVTGRVVLEGTPYDVHAGWAVLDHGRGKWPYAITWNWAAGSSERVGITLGGQWTDGTGSTENALFVDGRAHK IGEQLTWEYDRSDWRRPWRIHGPRVDATLEPFHERVDRTNLGVVANQTHQCFGHWSGWASTDGGERVSLDGLVGWAEEAR NRW
Sequences:
>Translated_323_residues MAEREITAPVDLCLPGGRLNPDAVGWSRRPLHRANLRGWGRAKRWEYWGIVTPRLCLGVVASSLDYAGVCSVWVLDRATG RTWSRDEVPPLARGVSLPPGVGGRTLVEAGRLRIELADAPGGASGTVVRASAPGIEVDLVVGAGGECVGVVVPWSARRFQ YTVKDVARPVTGRVVLEGTPYDVHAGWAVLDHGRGKWPYAITWNWAAGSSERVGITLGGQWTDGTGSTENALFVDGRAHK IGEQLTWEYDRSDWRRPWRIHGPRVDATLEPFHERVDRTNLGVVANQTHQCFGHWSGWASTDGGERVSLDGLVGWAEEAR NRW >Mature_322_residues AEREITAPVDLCLPGGRLNPDAVGWSRRPLHRANLRGWGRAKRWEYWGIVTPRLCLGVVASSLDYAGVCSVWVLDRATGR TWSRDEVPPLARGVSLPPGVGGRTLVEAGRLRIELADAPGGASGTVVRASAPGIEVDLVVGAGGECVGVVVPWSARRFQY TVKDVARPVTGRVVLEGTPYDVHAGWAVLDHGRGKWPYAITWNWAAGSSERVGITLGGQWTDGTGSTENALFVDGRAHKI GEQLTWEYDRSDWRRPWRIHGPRVDATLEPFHERVDRTNLGVVANQTHQCFGHWSGWASTDGGERVSLDGLVGWAEEARN RW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35364; Mature: 35233
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEREITAPVDLCLPGGRLNPDAVGWSRRPLHRANLRGWGRAKRWEYWGIVTPRLCLGVV CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECCCCHHHHHHHH ASSLDYAGVCSVWVLDRATGRTWSRDEVPPLARGVSLPPGVGGRTLVEAGRLRIELADAP HHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHEECCEEEEEEECCC GGASGTVVRASAPGIEVDLVVGAGGECVGVVVPWSARRFQYTVKDVARPVTGRVVLEGTP CCCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCEEEEEHHHHCCCCCCEEEEECCC YDVHAGWAVLDHGRGKWPYAITWNWAAGSSERVGITLGGQWTDGTGSTENALFVDGRAHK CEECCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCEECCCCCCCCCEEEECCCHHH IGEQLTWEYDRSDWRRPWRIHGPRVDATLEPFHERVDRTNLGVVANQTHQCFGHWSGWAS HCCCEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHCCCCCCCC TDGGERVSLDGLVGWAEEARNRW CCCCCEEEECCEEECHHHHCCCC >Mature Secondary Structure AEREITAPVDLCLPGGRLNPDAVGWSRRPLHRANLRGWGRAKRWEYWGIVTPRLCLGVV CCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECCCCHHHHHHHH ASSLDYAGVCSVWVLDRATGRTWSRDEVPPLARGVSLPPGVGGRTLVEAGRLRIELADAP HHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHEECCEEEEEEECCC GGASGTVVRASAPGIEVDLVVGAGGECVGVVVPWSARRFQYTVKDVARPVTGRVVLEGTP CCCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCEEEEEHHHHCCCCCCEEEEECCC YDVHAGWAVLDHGRGKWPYAITWNWAAGSSERVGITLGGQWTDGTGSTENALFVDGRAHK CEECCCEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCEECCCCCCCCCEEEECCCHHH IGEQLTWEYDRSDWRRPWRIHGPRVDATLEPFHERVDRTNLGVVANQTHQCFGHWSGWAS HCCCEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHCCCCCCCC TDGGERVSLDGLVGWAEEARNRW CCCCCEEEECCEEECHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA