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The map label for this gene is yjeB [C]

Identifier: 119718638

GI number: 119718638

Start: 4674566

End: 4675024

Strand: Reverse

Name: yjeB [C]

Synonym: Noca_4419

Alternate gene names: 119718638

Gene position: 4675024-4674566 (Counterclockwise)

Preceding gene: 119718639

Following gene: 119718636

Centisome position: 93.77

GC content: 73.42

Gene sequence:

>459_bases
ATGCGAGTCTCCGCGAAGTCCGACTACGCCCTGCGTGCGCTGATCGAGATGGCCTCGCGCGCGGATGGTCGGGCCGTGAG
CGCGGAGGAGCTCGGCCGGCTCCAGGAGATCCCGCACGGCTTCCTCCAGGCGATCCTCGCCGACCTGCGCCGGGCCGGGA
TCGTGATGTCCCAGCGCGGCCAGTCGGGCGGCTGGCGGATGGGCCGGTCCGCGGCGGACGTCTCGGTCGCGGACGTGATC
CGTGCGGTGGACGGCCCCCTGGTCTCGGTCTACGGGCTGCGCCCCGAGGCGGTCAGCTACAACGAGGCCGCGGACGTGCT
CCAGCACGTGTGGATCGCCGCCCGCCACTCCCTGCGCGACGTCTTCGAGCAGGTCTCGATCCAGCAGCTCGCCGACGGCC
GGCTCCCCGACGCGGTCACCACCCGCACGGCCGACGAGGACGCCTGGCAGCCCCACTAG

Upstream 100 bases:

>100_bases
CGCGGTCTGATCCGAGCCGGGCCGCGCTCGGGGTGCCGGCGGCTGCGCCGTACTCCCCAAGGTCGACTGAACAAGTCGAC
ACATCTGACACACTTGACCC

Downstream 100 bases:

>100_bases
CCAGGTCGGTCACCCGGCCTCGGCCAGCCGCCGCTTGAGCTTGCGCTTCTTCCGCTCCAGCTCGGCGTTGCGCTCCTCGA
GCACCTGGTTGTGCTCGCGC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MRVSAKSDYALRALIEMASRADGRAVSAEELGRLQEIPHGFLQAILADLRRAGIVMSQRGQSGGWRMGRSAADVSVADVI
RAVDGPLVSVYGLRPEAVSYNEAADVLQHVWIAARHSLRDVFEQVSIQQLADGRLPDAVTTRTADEDAWQPH

Sequences:

>Translated_152_residues
MRVSAKSDYALRALIEMASRADGRAVSAEELGRLQEIPHGFLQAILADLRRAGIVMSQRGQSGGWRMGRSAADVSVADVI
RAVDGPLVSVYGLRPEAVSYNEAADVLQHVWIAARHSLRDVFEQVSIQQLADGRLPDAVTTRTADEDAWQPH
>Mature_152_residues
MRVSAKSDYALRALIEMASRADGRAVSAEELGRLQEIPHGFLQAILADLRRAGIVMSQRGQSGGWRMGRSAADVSVADVI
RAVDGPLVSVYGLRPEAVSYNEAADVLQHVWIAARHSLRDVFEQVSIQQLADGRLPDAVTTRTADEDAWQPH

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790621, Length=87, Percent_Identity=37.9310344827586, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16589; Mature: 16589

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSAKSDYALRALIEMASRADGRAVSAEELGRLQEIPHGFLQAILADLRRAGIVMSQRG
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC
QSGGWRMGRSAADVSVADVIRAVDGPLVSVYGLRPEAVSYNEAADVLQHVWIAARHSLRD
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VFEQVSIQQLADGRLPDAVTTRTADEDAWQPH
HHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRVSAKSDYALRALIEMASRADGRAVSAEELGRLQEIPHGFLQAILADLRRAGIVMSQRG
CCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCC
QSGGWRMGRSAADVSVADVIRAVDGPLVSVYGLRPEAVSYNEAADVLQHVWIAARHSLRD
CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VFEQVSIQQLADGRLPDAVTTRTADEDAWQPH
HHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]