| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718636
Identifier: 119718636
GI number: 119718636
Start: 4672868
End: 4673320
Strand: Reverse
Name: 119718636
Synonym: Noca_4417
Alternate gene names: NA
Gene position: 4673320-4672868 (Counterclockwise)
Preceding gene: 119718638
Following gene: 119718631
Centisome position: 93.73
GC content: 69.54
Gene sequence:
>453_bases ATGATCACCTCCGACGCCATCACCTGGAACGCCCCCGACGACCCGCACCCCGCTCGGGCGGCGTCCCAGCGCTCCTACTC CGCCGTGGCGAAGGGCGACCTGGCCGAGTGGTTGACGGTGTACGCCGAGGACGCCGTGCTGGAGGACCCCGTCGGGCCGT CGCTGTTCGACCCCGACGGCGCGGGGCACCGCGGGCACGAGGGGATCACCGCGTTCTGGCAGGCCGCGATCGCGCCGATC GAGCGGTTCGAGTTCGAGATCAACGACTCCTTCGCGAACCCCGGCAGCAACACCTGCGCCAACATCGGCCGGATCACCAC GTCGTTCCCCGACGGCAGCCACACCACGACCGACCTGATCATGGTCTACGTCGTGGACGACGACGGCCGGGTCGCCTCGA TGAAGGCCTACTGGGAGCCGGAGCGGACGATGGCGACCTTCACGAAGGGCTGA
Upstream 100 bases:
>100_bases TCGGGTGGGCCGGACGGTGAACGCCGGGTGACGGCTTCTCGTGGGCGGACCGGCGCGACGGATCTAGAACGTGTTGCAGT TCTGGGCCTAGGATGCCCGG
Downstream 100 bases:
>100_bases GGGCCCAGCCCGCAGGCTCAGTCGCGCACGTGCCGGGCGACCCACTCCACGAGCGGGCGCAGCGCCTGCCAGTCGGCGCG GACCAGGTCGAGCAGCTCGG
Product: nuclear transport factor 2
Products: NA
Alternate protein names: Steroid Delta-Isomerase; Ketosteroid Isomerase- Like Protein
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MITSDAITWNAPDDPHPARAASQRSYSAVAKGDLAEWLTVYAEDAVLEDPVGPSLFDPDGAGHRGHEGITAFWQAAIAPI ERFEFEINDSFANPGSNTCANIGRITTSFPDGSHTTTDLIMVYVVDDDGRVASMKAYWEPERTMATFTKG
Sequences:
>Translated_150_residues MITSDAITWNAPDDPHPARAASQRSYSAVAKGDLAEWLTVYAEDAVLEDPVGPSLFDPDGAGHRGHEGITAFWQAAIAPI ERFEFEINDSFANPGSNTCANIGRITTSFPDGSHTTTDLIMVYVVDDDGRVASMKAYWEPERTMATFTKG >Mature_150_residues MITSDAITWNAPDDPHPARAASQRSYSAVAKGDLAEWLTVYAEDAVLEDPVGPSLFDPDGAGHRGHEGITAFWQAAIAPI ERFEFEINDSFANPGSNTCANIGRITTSFPDGSHTTTDLIMVYVVDDDGRVASMKAYWEPERTMATFTKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16283; Mature: 16283
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSDAITWNAPDDPHPARAASQRSYSAVAKGDLAEWLTVYAEDAVLEDPVGPSLFDPDG CCCCCEEEECCCCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC AGHRGHEGITAFWQAAIAPIERFEFEINDSFANPGSNTCANIGRITTSFPDGSHTTTDLI CCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHCCEEEECCCCCCCCCEEEE MVYVVDDDGRVASMKAYWEPERTMATFTKG EEEEECCCCCEEEEEEEECCCCCEEEECCC >Mature Secondary Structure MITSDAITWNAPDDPHPARAASQRSYSAVAKGDLAEWLTVYAEDAVLEDPVGPSLFDPDG CCCCCEEEECCCCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC AGHRGHEGITAFWQAAIAPIERFEFEINDSFANPGSNTCANIGRITTSFPDGSHTTTDLI CCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHCCEEEECCCCCCCCCEEEE MVYVVDDDGRVASMKAYWEPERTMATFTKG EEEEECCCCCEEEEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA