| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is sglT [H]
Identifier: 119718626
GI number: 119718626
Start: 4663143
End: 4664984
Strand: Reverse
Name: sglT [H]
Synonym: Noca_4407
Alternate gene names: 119718626
Gene position: 4664984-4663143 (Counterclockwise)
Preceding gene: 119718630
Following gene: 119718625
Centisome position: 93.56
GC content: 67.97
Gene sequence:
>1842_bases GTGCCGCCGGACGTTTGTGCGTCCGGACGTCCGGGCACCGGACGTGGTGGTCCGTCCGGGCTGCGTCACCGAGGGGAACG AAAGGTCTTCACCATGGCGAGTCCGACCGTCCTGGCCACCGACACGATCATCTCGGCCAACGCCGTCGACTACGTGATCG TCGCCCTGTACTTCGCGGTCGTGCTCGGCATCGGGGTCGTGGCGCGCCGCCAGATCTCCGACTCCGTCGACTTCTTCCTC TCCGGCCGCTCCCTGCCCGCCTGGGTCACCGGGCTCGCCTTCATCTCCGCGAACCTCGGCGCAGTCGAGATCATGGGGAT GTCGGCATCGGGAGCCGAGTTCGGGCTGCCGACCGTCCACTACTTCTGGATCGGCGCGATCCCCGCGATGCTGTTCCTGG GCGTCGTGATGATGCCCTTCTACTACGGCTCCAAGGTCCGCTCGGTCCCCGAGTTCATGCGCCGCCGGTTCGGCACCGGT GCGCACCTGGTCAACGCCGTCTCGTTCGCGGTCGCGCAGCTGCTGATCGCCGGCATCAACCTGTTCCTCCTCGGCAGCAT CGTGCACGCGCTGCTGGGCTGGCCGCTGTGGGTGGCGCTGATCGTCGCGGCCGCGATCGTGCTCTCCTACATCACGCTCG GCGGGCTGAGCGCGGCGATCTACAACGAGGTGCTGCAGTTCTTCGTGATCGTCGCGGGCCTGCTGCCGCTGACCCTGATC GGGCTGCACCGCATCGGCGGCTGGGGCGGGCTGACCGACAAGATCACCGAGGCCGCCCAGGCCCACCCCGACGCCATCCC GCCGGCCGACCAGCAGCTGAACTCCTGGCCGGGCCTCCCGCTGACCGGGTTCGACTCCTCGCTGCTGTCGGTGATCGGGA TCGTCTTCGGTCTCGGGTTCGTGCTGTCCTTCGGCTACTGGACCACCAACTTCGTCGAGGTCCAGCGCGCGATGGCCTCC AACTCGATCTCCTCGGCCCGCAAGACGCCGATCATCGGCGCGTTCCCGAAGATGTTCGTCCCCTTCATCACGATCATCCC CGGCATGATCGCCGCCGTCCTCGTCACCGAGATCGGCAAGGTGAAGGCAGGTCAGAGCGTGCCCGGCGGAGCGTCGGGCG ACGGGGTCGCCTACAACGACGCGCTGCTCTACCTGATGCGCGACGTGCTGCCCAACGGGCTGCTCGGCCTGGCGATCACC GGCCTGTTGGCCGCGTTCATGGCCGGCATGGCCGCGAACGTCTCCGCGTTCAACACCGTGTTCAGCTACGACCTGTGGCA GCAGTACGTCGTCAAGGACCGCGACGACCACTACTACCTGGTGATCGGCCGGATCGCGACGGTGGCGGCGACCGTGGTCG CGATCTTCACCGCCGGCCTGGCCAGCAACTTCAGCAACATCATGAACTACCTCCAGGTGCTGTTCGGGTTCTTCAACGCG CCGTTGTTCGCGACCTTCATCCTCGGCATGTTCTGGAAGCGGATGTCCGCGGCCGCCGGCTGGGTCGGCCTCGTGGCCGG CACGGTCTCGGCCGTGATCGTCGCGTTCCTCAGCGAGGACGCGTTCGGCTCCTGGAGCACCGGGGCGCTGCCGATCAGCG GTCAGGGCGCGGCGTTCGTCGCCGCCGGCGTCGCCTTCGTGGTCGACATCGTGCTGAGCGTCGCGATCTCGCTCGTCACC CCGCCGAAGCCGGTCGAGGAGCTGCGCGGCCTGGTCTACTCCGAGACCCCGCGCGAGGACCTCGTCGACCCGGACGAGGC GTCCCACCCGTGGTACCAGCGCACGCTCCCGCTCGCCGGGGTGGCCCTGGTCCTGGTCATCATCTTGAACGTCATCTTCT AG
Upstream 100 bases:
>100_bases CGGCGGAGGCTCTCGACGTACGGCGTGATGTCCATGCGCACCACAATGACATCATCGTGGTGTCATTGTCAACGGTTTGC GACGTCATGGTGATGTCGCG
Downstream 100 bases:
>100_bases AGGAGACGCCATGACCGAGAGCACCCCCACCAAGACCGCGGGACGGCACACCGCCGGCCTGTTGGACATCCGCAACATCA TCGGCAGCCTGGTCGGCGTG
Product: SSS family solute/sodium (Na+) symporter
Products: NA
Alternate protein names: Na(+)/glucose symporter [H]
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MPPDVCASGRPGTGRGGPSGLRHRGERKVFTMASPTVLATDTIISANAVDYVIVALYFAVVLGIGVVARRQISDSVDFFL SGRSLPAWVTGLAFISANLGAVEIMGMSASGAEFGLPTVHYFWIGAIPAMLFLGVVMMPFYYGSKVRSVPEFMRRRFGTG AHLVNAVSFAVAQLLIAGINLFLLGSIVHALLGWPLWVALIVAAAIVLSYITLGGLSAAIYNEVLQFFVIVAGLLPLTLI GLHRIGGWGGLTDKITEAAQAHPDAIPPADQQLNSWPGLPLTGFDSSLLSVIGIVFGLGFVLSFGYWTTNFVEVQRAMAS NSISSARKTPIIGAFPKMFVPFITIIPGMIAAVLVTEIGKVKAGQSVPGGASGDGVAYNDALLYLMRDVLPNGLLGLAIT GLLAAFMAGMAANVSAFNTVFSYDLWQQYVVKDRDDHYYLVIGRIATVAATVVAIFTAGLASNFSNIMNYLQVLFGFFNA PLFATFILGMFWKRMSAAAGWVGLVAGTVSAVIVAFLSEDAFGSWSTGALPISGQGAAFVAAGVAFVVDIVLSVAISLVT PPKPVEELRGLVYSETPREDLVDPDEASHPWYQRTLPLAGVALVLVIILNVIF
Sequences:
>Translated_613_residues MPPDVCASGRPGTGRGGPSGLRHRGERKVFTMASPTVLATDTIISANAVDYVIVALYFAVVLGIGVVARRQISDSVDFFL SGRSLPAWVTGLAFISANLGAVEIMGMSASGAEFGLPTVHYFWIGAIPAMLFLGVVMMPFYYGSKVRSVPEFMRRRFGTG AHLVNAVSFAVAQLLIAGINLFLLGSIVHALLGWPLWVALIVAAAIVLSYITLGGLSAAIYNEVLQFFVIVAGLLPLTLI GLHRIGGWGGLTDKITEAAQAHPDAIPPADQQLNSWPGLPLTGFDSSLLSVIGIVFGLGFVLSFGYWTTNFVEVQRAMAS NSISSARKTPIIGAFPKMFVPFITIIPGMIAAVLVTEIGKVKAGQSVPGGASGDGVAYNDALLYLMRDVLPNGLLGLAIT GLLAAFMAGMAANVSAFNTVFSYDLWQQYVVKDRDDHYYLVIGRIATVAATVVAIFTAGLASNFSNIMNYLQVLFGFFNA PLFATFILGMFWKRMSAAAGWVGLVAGTVSAVIVAFLSEDAFGSWSTGALPISGQGAAFVAAGVAFVVDIVLSVAISLVT PPKPVEELRGLVYSETPREDLVDPDEASHPWYQRTLPLAGVALVLVIILNVIF >Mature_612_residues PPDVCASGRPGTGRGGPSGLRHRGERKVFTMASPTVLATDTIISANAVDYVIVALYFAVVLGIGVVARRQISDSVDFFLS GRSLPAWVTGLAFISANLGAVEIMGMSASGAEFGLPTVHYFWIGAIPAMLFLGVVMMPFYYGSKVRSVPEFMRRRFGTGA HLVNAVSFAVAQLLIAGINLFLLGSIVHALLGWPLWVALIVAAAIVLSYITLGGLSAAIYNEVLQFFVIVAGLLPLTLIG LHRIGGWGGLTDKITEAAQAHPDAIPPADQQLNSWPGLPLTGFDSSLLSVIGIVFGLGFVLSFGYWTTNFVEVQRAMASN SISSARKTPIIGAFPKMFVPFITIIPGMIAAVLVTEIGKVKAGQSVPGGASGDGVAYNDALLYLMRDVLPNGLLGLAITG LLAAFMAGMAANVSAFNTVFSYDLWQQYVVKDRDDHYYLVIGRIATVAATVVAIFTAGLASNFSNIMNYLQVLFGFFNAP LFATFILGMFWKRMSAAAGWVGLVAGTVSAVIVAFLSEDAFGSWSTGALPISGQGAAFVAAGVAFVVDIVLSVAISLVTP PKPVEELRGLVYSETPREDLVDPDEASHPWYQRTLPLAGVALVLVIILNVIF
Specific function: Actively transports glucose into cells by Na(+) cotransport [H]
COG id: COG4146
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI14140236, Length=565, Percent_Identity=26.7256637168142, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI4507033, Length=595, Percent_Identity=28.4033613445378, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI4507031, Length=565, Percent_Identity=26.5486725663717, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI109659836, Length=590, Percent_Identity=26.9491525423729, Blast_Score=160, Evalue=4e-39, Organism=Homo sapiens, GI110835708, Length=592, Percent_Identity=27.027027027027, Blast_Score=159, Evalue=1e-38, Organism=Homo sapiens, GI17941285, Length=465, Percent_Identity=27.3118279569892, Blast_Score=156, Evalue=6e-38, Organism=Homo sapiens, GI109659839, Length=606, Percent_Identity=26.2376237623762, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI206597483, Length=585, Percent_Identity=27.1794871794872, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI206597487, Length=609, Percent_Identity=26.6009852216749, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI4507035, Length=456, Percent_Identity=22.3684210526316, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI157671931, Length=216, Percent_Identity=25, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI256985183, Length=444, Percent_Identity=21.3963963963964, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI167466278, Length=472, Percent_Identity=23.0932203389831, Blast_Score=81, Evalue=3e-15, Organism=Escherichia coli, GI1790113, Length=471, Percent_Identity=23.9915074309979, Blast_Score=110, Evalue=3e-25, Organism=Caenorhabditis elegans, GI32566512, Length=396, Percent_Identity=24.2424242424242, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24651741, Length=528, Percent_Identity=20.4545454545455, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI28573698, Length=456, Percent_Identity=21.7105263157895, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24645928, Length=491, Percent_Identity=21.1812627291242, Blast_Score=76, Evalue=6e-14, Organism=Drosophila melanogaster, GI281362918, Length=466, Percent_Identity=20.3862660944206, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24641117, Length=286, Percent_Identity=22.027972027972, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI24650192, Length=366, Percent_Identity=20.7650273224044, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI24651739, Length=476, Percent_Identity=18.4873949579832, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 64854; Mature: 64723
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPDVCASGRPGTGRGGPSGLRHRGERKVFTMASPTVLATDTIISANAVDYVIVALYFAV CCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCEEECCCHHCCHHHHHHHHHHHHHH VLGIGVVARRQISDSVDFFLSGRSLPAWVTGLAFISANLGAVEIMGMSASGAEFGLPTVH HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHH YFWIGAIPAMLFLGVVMMPFYYGSKVRSVPEFMRRRFGTGAHLVNAVSFAVAQLLIAGIN HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LFLLGSIVHALLGWPLWVALIVAAAIVLSYITLGGLSAAIYNEVLQFFVIVAGLLPLTLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLHRIGGWGGLTDKITEAAQAHPDAIPPADQQLNSWPGLPLTGFDSSLLSVIGIVFGLGF HHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH VLSFGYWTTNFVEVQRAMASNSISSARKTPIIGAFPKMFVPFITIIPGMIAAVLVTEIGK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VKAGQSVPGGASGDGVAYNDALLYLMRDVLPNGLLGLAITGLLAAFMAGMAANVSAFNTV HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSYDLWQQYVVKDRDDHYYLVIGRIATVAATVVAIFTAGLASNFSNIMNYLQVLFGFFNA HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLFATFILGMFWKRMSAAAGWVGLVAGTVSAVIVAFLSEDAFGSWSTGALPISGQGAAFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHH AAGVAFVVDIVLSVAISLVTPPKPVEELRGLVYSETPREDLVDPDEASHPWYQRTLPLAG HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHCCHHH VALVLVIILNVIF HHHHHHHHHHHHC >Mature Secondary Structure PPDVCASGRPGTGRGGPSGLRHRGERKVFTMASPTVLATDTIISANAVDYVIVALYFAV CCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCEEECCCHHCCHHHHHHHHHHHHHH VLGIGVVARRQISDSVDFFLSGRSLPAWVTGLAFISANLGAVEIMGMSASGAEFGLPTVH HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHH YFWIGAIPAMLFLGVVMMPFYYGSKVRSVPEFMRRRFGTGAHLVNAVSFAVAQLLIAGIN HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LFLLGSIVHALLGWPLWVALIVAAAIVLSYITLGGLSAAIYNEVLQFFVIVAGLLPLTLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLHRIGGWGGLTDKITEAAQAHPDAIPPADQQLNSWPGLPLTGFDSSLLSVIGIVFGLGF HHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH VLSFGYWTTNFVEVQRAMASNSISSARKTPIIGAFPKMFVPFITIIPGMIAAVLVTEIGK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VKAGQSVPGGASGDGVAYNDALLYLMRDVLPNGLLGLAITGLLAAFMAGMAANVSAFNTV HCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FSYDLWQQYVVKDRDDHYYLVIGRIATVAATVVAIFTAGLASNFSNIMNYLQVLFGFFNA HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLFATFILGMFWKRMSAAAGWVGLVAGTVSAVIVAFLSEDAFGSWSTGALPISGQGAAFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHH AAGVAFVVDIVLSVAISLVTPPKPVEELRGLVYSETPREDLVDPDEASHPWYQRTLPLAG HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHCCHHH VALVLVIILNVIF HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8652595; 10835424; 10757971 [H]