| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718625
Identifier: 119718625
GI number: 119718625
Start: 4662854
End: 4663132
Strand: Reverse
Name: 119718625
Synonym: Noca_4406
Alternate gene names: NA
Gene position: 4663132-4662854 (Counterclockwise)
Preceding gene: 119718626
Following gene: 119718617
Centisome position: 93.53
GC content: 68.82
Gene sequence:
>279_bases ATGACCGAGAGCACCCCCACCAAGACCGCGGGACGGCACACCGCCGGCCTGTTGGACATCCGCAACATCATCGGCAGCCT GGTCGGCGTGTACGGCGTGATCCTCACCCTGATGGGCCTGTTCGCCGACCAGGAGTCGGACAAGACCGGCGACGTGAACG CCAACCTCTGGGCCGGCCTCGCGATGATCGTGGTCGGCGTGGTGTTCGTGACCTGGGCACGGCTGCGCCCGGTCGTGGTG CCCGAGCACCACGACCGCGCTCAGGACGAGCCGGCGTAG
Upstream 100 bases:
>100_bases GACGAGGCGTCCCACCCGTGGTACCAGCGCACGCTCCCGCTCGCCGGGGTGGCCCTGGTCCTGGTCATCATCTTGAACGT CATCTTCTAGAGGAGACGCC
Downstream 100 bases:
>100_bases AGGGCCACCGCGTCGACGGCGCCGTCCTCGCGGTAGACCTCCAGCCGCAGCGGACAGCCCGAACGGCTCGGTGCGAGGAC CAGCACCGCGAACGCGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MTESTPTKTAGRHTAGLLDIRNIIGSLVGVYGVILTLMGLFADQESDKTGDVNANLWAGLAMIVVGVVFVTWARLRPVVV PEHHDRAQDEPA
Sequences:
>Translated_92_residues MTESTPTKTAGRHTAGLLDIRNIIGSLVGVYGVILTLMGLFADQESDKTGDVNANLWAGLAMIVVGVVFVTWARLRPVVV PEHHDRAQDEPA >Mature_91_residues TESTPTKTAGRHTAGLLDIRNIIGSLVGVYGVILTLMGLFADQESDKTGDVNANLWAGLAMIVVGVVFVTWARLRPVVVP EHHDRAQDEPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9882; Mature: 9750
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESTPTKTAGRHTAGLLDIRNIIGSLVGVYGVILTLMGLFADQESDKTGDVNANLWAGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AMIVVGVVFVTWARLRPVVVPEHHDRAQDEPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TESTPTKTAGRHTAGLLDIRNIIGSLVGVYGVILTLMGLFADQESDKTGDVNANLWAGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH AMIVVGVVFVTWARLRPVVVPEHHDRAQDEPA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA