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The map label for this gene is amaB [H]

Identifier: 119718606

GI number: 119718606

Start: 4638887

End: 4640071

Strand: Reverse

Name: amaB [H]

Synonym: Noca_4387

Alternate gene names: 119718606

Gene position: 4640071-4638887 (Counterclockwise)

Preceding gene: 119718615

Following gene: 119718605

Centisome position: 93.06

GC content: 75.36

Gene sequence:

>1185_bases
ATGCCTGACGACTTCGAGCGGATGTGGGCCGACCTCGCCCCGGTGGGGCGCTCCGCGTCGAGCGGCGGCTACTTCCGCCA
ACCCTTCACGGCTCCGGAGACCGAGCTGCGCGCCTGGTTCGTGGAGCAGTGCCGGGCCCGCGGGCTGCGGGTGGAGAGCG
ACCCCTTCGGCAACGTCGTGGGCTGGTGGGACGTCGGCGCCGGACCCGCGGTGCTCACCGGGTCGCACCTGGACTCGGTG
CTCGACGGCGGTGCGTACGACGGTCCGCTGGGCGTGGTGTCGGCGCTGGCGGCGATCGACCTGCTGCGCTCGCGCGGCGT
CGCGCCGGCGCGGCCGATCGGGGTCTCGGTGTTCGTGGAGGAGGAGGGCTCGCGCTTCGGGTTGGCCTGCCTCGGCTCGC
GGCTGGCGACCGGCGCCGTGTCGTGGGAGCGGGCGCGCGAGCTGCCCGACCGGGACGGCGTCGCCTTCGGCGACGTGGTC
GAGGGCGGGGCGTCCGCGCTGCTGTCCTTGGTGGGCACCTTCGTCGAGCTGCACGTCGAGCAGGGCCGCGACCTCGTGGA
CCGCGGTGCGGCGGTGGGCGTGGCGAGCGAGATCTGGCCGCACGGGCGCTACCGCTTCGAGTTCGCCGGCACCGCGAACC
ACGCCGGGACCACGCGGATGGAGGACCGCGCCGACCCGATGCTCACCTACGCGTTCACCGCCCTGGGTGCCAACAAGCAG
GCGCGGCTCGCCGGTGAGCGGGCGACCTTCGGCCGGGTCTCGGTCGAGCCGAACGGCACCAACGCCGTGCCGTCTCACGT
GACCGCGTGGCTGGACGCCCGGTGCGCGTCCGAGTCGTCGCTGGCCGCGCTCGTCGAGGGGATCACGACCCAGGCGACCG
ACCGGGCCGGGCGGGACGGCACCGTCCTGTCCGTGACGGCCGAGTCGGTGTCGCCGGCCGTGCGGTTCGACCCCGCACTC
GCCGCCCGGGTCGCCGCCGACCACGAGGGCGGCGACTGGCCGGTGATCCCGACCCAGGCCGGCCACGACGCCGGCATCCT
CTCCGCCGCCGGCATCCCGACTGCGATGCTGTTCGTCCGCAACCCGACCGGGGTCTCGCACTCGCCGGCCGAGCACGCGG
AGCTCCCCGACTGCCTGGTCGGCGTCTCCGCCCTGGCCGACACCCTGGAACGGCTGGCCCGGTGA

Upstream 100 bases:

>100_bases
GACGACCGCCGGGTCGACCGGTTCGGTCGCGTAGTTGCGGACCATGCGGCGGCGGCGTACGACGTCTTGGAACTCCATGG
CCCGGATTATGGAGGGAACC

Downstream 100 bases:

>100_bases
CCGAGTCCCCCTCCTCGGCGTACCTCCTCGAGCGGGCGTGGGTCGACGGCGCCGTCCGCGACGACGTGCTCGTCGAGATC
GAGGACGGCCGATTCACATC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MPDDFERMWADLAPVGRSASSGGYFRQPFTAPETELRAWFVEQCRARGLRVESDPFGNVVGWWDVGAGPAVLTGSHLDSV
LDGGAYDGPLGVVSALAAIDLLRSRGVAPARPIGVSVFVEEEGSRFGLACLGSRLATGAVSWERARELPDRDGVAFGDVV
EGGASALLSLVGTFVELHVEQGRDLVDRGAAVGVASEIWPHGRYRFEFAGTANHAGTTRMEDRADPMLTYAFTALGANKQ
ARLAGERATFGRVSVEPNGTNAVPSHVTAWLDARCASESSLAALVEGITTQATDRAGRDGTVLSVTAESVSPAVRFDPAL
AARVAADHEGGDWPVIPTQAGHDAGILSAAGIPTAMLFVRNPTGVSHSPAEHAELPDCLVGVSALADTLERLAR

Sequences:

>Translated_394_residues
MPDDFERMWADLAPVGRSASSGGYFRQPFTAPETELRAWFVEQCRARGLRVESDPFGNVVGWWDVGAGPAVLTGSHLDSV
LDGGAYDGPLGVVSALAAIDLLRSRGVAPARPIGVSVFVEEEGSRFGLACLGSRLATGAVSWERARELPDRDGVAFGDVV
EGGASALLSLVGTFVELHVEQGRDLVDRGAAVGVASEIWPHGRYRFEFAGTANHAGTTRMEDRADPMLTYAFTALGANKQ
ARLAGERATFGRVSVEPNGTNAVPSHVTAWLDARCASESSLAALVEGITTQATDRAGRDGTVLSVTAESVSPAVRFDPAL
AARVAADHEGGDWPVIPTQAGHDAGILSAAGIPTAMLFVRNPTGVSHSPAEHAELPDCLVGVSALADTLERLAR
>Mature_393_residues
PDDFERMWADLAPVGRSASSGGYFRQPFTAPETELRAWFVEQCRARGLRVESDPFGNVVGWWDVGAGPAVLTGSHLDSVL
DGGAYDGPLGVVSALAAIDLLRSRGVAPARPIGVSVFVEEEGSRFGLACLGSRLATGAVSWERARELPDRDGVAFGDVVE
GGASALLSLVGTFVELHVEQGRDLVDRGAAVGVASEIWPHGRYRFEFAGTANHAGTTRMEDRADPMLTYAFTALGANKQA
RLAGERATFGRVSVEPNGTNAVPSHVTAWLDARCASESSLAALVEGITTQATDRAGRDGTVLSVTAESVSPAVRFDPALA
ARVAADHEGGDWPVIPTQAGHDAGILSAAGIPTAMLFVRNPTGVSHSPAEHAELPDCLVGVSALADTLERLAR

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=390, Percent_Identity=32.3076923076923, Blast_Score=168, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 41277; Mature: 41146

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDDFERMWADLAPVGRSASSGGYFRQPFTAPETELRAWFVEQCRARGLRVESDPFGNVV
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCEE
GWWDVGAGPAVLTGSHLDSVLDGGAYDGPLGVVSALAAIDLLRSRGVAPARPIGVSVFVE
EEEECCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
EEGSRFGLACLGSRLATGAVSWERARELPDRDGVAFGDVVEGGASALLSLVGTFVELHVE
CCCCEECHHHHHHHHHHCCCCHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
QGRDLVDRGAAVGVASEIWPHGRYRFEFAGTANHAGTTRMEDRADPMLTYAFTALGANKQ
HCCCHHHCCCHHCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCH
ARLAGERATFGRVSVEPNGTNAVPSHVTAWLDARCASESSLAALVEGITTQATDRAGRDG
HHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
TVLSVTAESVSPAVRFDPALAARVAADHEGGDWPVIPTQAGHDAGILSAAGIPTAMLFVR
CEEEEEHHHCCCCHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEE
NPTGVSHSPAEHAELPDCLVGVSALADTLERLAR
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDDFERMWADLAPVGRSASSGGYFRQPFTAPETELRAWFVEQCRARGLRVESDPFGNVV
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCEE
GWWDVGAGPAVLTGSHLDSVLDGGAYDGPLGVVSALAAIDLLRSRGVAPARPIGVSVFVE
EEEECCCCCCEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
EEGSRFGLACLGSRLATGAVSWERARELPDRDGVAFGDVVEGGASALLSLVGTFVELHVE
CCCCEECHHHHHHHHHHCCCCHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
QGRDLVDRGAAVGVASEIWPHGRYRFEFAGTANHAGTTRMEDRADPMLTYAFTALGANKQ
HCCCHHHCCCHHCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCH
ARLAGERATFGRVSVEPNGTNAVPSHVTAWLDARCASESSLAALVEGITTQATDRAGRDG
HHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
TVLSVTAESVSPAVRFDPALAARVAADHEGGDWPVIPTQAGHDAGILSAAGIPTAMLFVR
CEEEEEHHHCCCCHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEE
NPTGVSHSPAEHAELPDCLVGVSALADTLERLAR
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]