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The map label for this gene is mtaD [H]

Identifier: 119718605

GI number: 119718605

Start: 4637598

End: 4638890

Strand: Reverse

Name: mtaD [H]

Synonym: Noca_4386

Alternate gene names: 119718605

Gene position: 4638890-4637598 (Counterclockwise)

Preceding gene: 119718606

Following gene: 119718604

Centisome position: 93.04

GC content: 73.4

Gene sequence:

>1293_bases
GTGACCGAGTCCCCCTCCTCGGCGTACCTCCTCGAGCGGGCGTGGGTCGACGGCGCCGTCCGCGACGACGTGCTCGTCGA
GATCGAGGACGGCCGATTCACATCCGTCACACCGGTAGGGCAAAGCCTCCGCTTCTCGGGTGAAGTTTCGGCCCAGAACG
TCCGGTTTCCCCGGCTAGCCGGGGAAACCGTCCGGCTCGCCGGCCTCACCCTCCCCGGGCTGACCAACGACCACAGCCAC
GCGTTCCATCGGGCGCTGCGGGGGCGGACCCAGCGGGGGCGGGGCACGTTCTGGACCTGGCGCGAGCAGATGTACGCCGT
GGCGGAGCGGCTCACCCCGGACACCTACTTCACCCTGGCCCGGGCGACGTTCCGGGAGATGGTGGCGGCGGGCTACACGA
GCGTGTCCGAGTTCCACTACCTCCACGACCCGGAGCCGGCCACGGGCGACGCCCTCCGCGAGGCCGCACGAGCGGCGGGC
ATCCGGCTCACGCTGCTCGACGCCTGCTACGTCAGCAGCGGCTTCGGCGCGCCGCCGGAGGGCGTGCAGCTCCGGTTCAG
CGACGGCACCGCCGAGCGGTGGGCCGCACGGGTCGGCGCCGGCCCGGCCGCGATCCACTCCGTGCGCGCCGTCCCCCGCG
AGCAGCTGGCGGTCTTCCGCGGCCGCGCGCCCCTGCACGTCCACCTCTCCGAGCAGGTCGCCGAGAACGAGGCCTGCCTG
GCGGCGTACGGCGTCACCCCGACCCGGCTGCTCCACGACGAGGGTCTGCTGGGTCCGGACACCACCGTCGTGCACGCCAC
CCACCTCACCGACGACGACATCGCGCTGCTCGGCAGCACCCGCACGAACGTCTGCATCACGCCCACCACCGAGCGTGACC
TCGCCGACGGGATCGGCCCGGCGCGCCGGCTCGCGGACGTGGGCTGCCGGATCAGCATCGGCAGCGACAGCCACGCGGTC
ATCGACCCGTTCGAGGAGCTGCGCGGCCTCGAGATGGACGAGCGGCTCGCGACCCAGGAGCGCGGGCACTGGTCAGCTGC
CGAGCTGTTAGCGATCGGCACCGCCGGGCTGCAGATCGCGGTCGGTGCGCCGGCCGACCTGGTCACGATCGACACGCGAA
GCACCCGCACCGCCGGCACCGGCGCCGACGAGCACACCGCCGTCTTCGCCGCCACCGCCGCCGACGTCACCCACGTCGTC
GTCGACGGCCGGGTCGTCGCGTCCGAGGACGACCACGAGGACATCGGCCGCGAGCTGGCGGCTGCGATGGAGGCACTGTG
GCAAGCACCCTGA

Upstream 100 bases:

>100_bases
ACCCGACCGGGGTCTCGCACTCGCCGGCCGAGCACGCGGAGCTCCCCGACTGCCTGGTCGGCGTCTCCGCCCTGGCCGAC
ACCCTGGAACGGCTGGCCCG

Downstream 100 bases:

>100_bases
TCACGAACATCGGCGAGCTCGTCACCAACGACCCCGAGGCCGCCGACGACGGCCGGGGGCTGCTCGGGATCGTCGAGCAG
GCCGCGCTCGTGATCGACGG

Product: N-formimino-L-glutamate deiminase

Products: NA

Alternate protein names: MTA/SAH deaminase [H]

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTESPSSAYLLERAWVDGAVRDDVLVEIEDGRFTSVTPVGQSLRFSGEVSAQNVRFPRLAGETVRLAGLTLPGLTNDHSH
AFHRALRGRTQRGRGTFWTWREQMYAVAERLTPDTYFTLARATFREMVAAGYTSVSEFHYLHDPEPATGDALREAARAAG
IRLTLLDACYVSSGFGAPPEGVQLRFSDGTAERWAARVGAGPAAIHSVRAVPREQLAVFRGRAPLHVHLSEQVAENEACL
AAYGVTPTRLLHDEGLLGPDTTVVHATHLTDDDIALLGSTRTNVCITPTTERDLADGIGPARRLADVGCRISIGSDSHAV
IDPFEELRGLEMDERLATQERGHWSAAELLAIGTAGLQIAVGAPADLVTIDTRSTRTAGTGADEHTAVFAATAADVTHVV
VDGRVVASEDDHEDIGRELAAAMEALWQAP

Sequences:

>Translated_430_residues
MTESPSSAYLLERAWVDGAVRDDVLVEIEDGRFTSVTPVGQSLRFSGEVSAQNVRFPRLAGETVRLAGLTLPGLTNDHSH
AFHRALRGRTQRGRGTFWTWREQMYAVAERLTPDTYFTLARATFREMVAAGYTSVSEFHYLHDPEPATGDALREAARAAG
IRLTLLDACYVSSGFGAPPEGVQLRFSDGTAERWAARVGAGPAAIHSVRAVPREQLAVFRGRAPLHVHLSEQVAENEACL
AAYGVTPTRLLHDEGLLGPDTTVVHATHLTDDDIALLGSTRTNVCITPTTERDLADGIGPARRLADVGCRISIGSDSHAV
IDPFEELRGLEMDERLATQERGHWSAAELLAIGTAGLQIAVGAPADLVTIDTRSTRTAGTGADEHTAVFAATAADVTHVV
VDGRVVASEDDHEDIGRELAAAMEALWQAP
>Mature_429_residues
TESPSSAYLLERAWVDGAVRDDVLVEIEDGRFTSVTPVGQSLRFSGEVSAQNVRFPRLAGETVRLAGLTLPGLTNDHSHA
FHRALRGRTQRGRGTFWTWREQMYAVAERLTPDTYFTLARATFREMVAAGYTSVSEFHYLHDPEPATGDALREAARAAGI
RLTLLDACYVSSGFGAPPEGVQLRFSDGTAERWAARVGAGPAAIHSVRAVPREQLAVFRGRAPLHVHLSEQVAENEACLA
AYGVTPTRLLHDEGLLGPDTTVVHATHLTDDDIALLGSTRTNVCITPTTERDLADGIGPARRLADVGCRISIGSDSHAVI
DPFEELRGLEMDERLATQERGHWSAAELLAIGTAGLQIAVGAPADLVTIDTRSTRTAGTGADEHTAVFAATAADVTHVVV
DGRVVASEDDHEDIGRELAAAMEALWQAP

Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MTA/SAH deaminase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17540282, Length=356, Percent_Identity=31.7415730337079, Blast_Score=165, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: =3.5.4.28 [H]

Molecular weight: Translated: 46211; Mature: 46080

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESPSSAYLLERAWVDGAVRDDVLVEIEDGRFTSVTPVGQSLRFSGEVSAQNVRFPRLA
CCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCCEEECCCCCCCCCCCCCCC
GETVRLAGLTLPGLTNDHSHAFHRALRGRTQRGRGTFWTWREQMYAVAERLTPDTYFTLA
CCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHH
RATFREMVAAGYTSVSEFHYLHDPEPATGDALREAARAAGIRLTLLDACYVSSGFGAPPE
HHHHHHHHHHCCCHHHHCCEECCCCCCCHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCC
GVQLRFSDGTAERWAARVGAGPAAIHSVRAVPREQLAVFRGRAPLHVHLSEQVAENEACL
CCEEEECCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCEEEEEHHHHCCCCCEE
AAYGVTPTRLLHDEGLLGPDTTVVHATHLTDDDIALLGSTRTNVCITPTTERDLADGIGP
EEECCCHHHEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEECCCCHHHHHCCCH
ARRLADVGCRISIGSDSHAVIDPFEELRGLEMDERLATQERGHWSAAELLAIGTAGLQIA
HHHHHHCCCEEEECCCCCCEECCHHHHCCCCHHHHHHHHHCCCCCHHHHEEEECCCEEEE
VGAPADLVTIDTRSTRTAGTGADEHTAVFAATAADVTHVVVDGRVVASEDDHEDIGRELA
ECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHH
AAMEALWQAP
HHHHHHHCCC
>Mature Secondary Structure 
TESPSSAYLLERAWVDGAVRDDVLVEIEDGRFTSVTPVGQSLRFSGEVSAQNVRFPRLA
CCCCCHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCCEEECCCCCCCCCCCCCCC
GETVRLAGLTLPGLTNDHSHAFHRALRGRTQRGRGTFWTWREQMYAVAERLTPDTYFTLA
CCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHCCCCHHHHHH
RATFREMVAAGYTSVSEFHYLHDPEPATGDALREAARAAGIRLTLLDACYVSSGFGAPPE
HHHHHHHHHHCCCHHHHCCEECCCCCCCHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCC
GVQLRFSDGTAERWAARVGAGPAAIHSVRAVPREQLAVFRGRAPLHVHLSEQVAENEACL
CCEEEECCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHCCCCCEEEEEHHHHCCCCCEE
AAYGVTPTRLLHDEGLLGPDTTVVHATHLTDDDIALLGSTRTNVCITPTTERDLADGIGP
EEECCCHHHEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEECCCCHHHHHCCCH
ARRLADVGCRISIGSDSHAVIDPFEELRGLEMDERLATQERGHWSAAELLAIGTAGLQIA
HHHHHHCCCEEEECCCCCCEECCHHHHCCCCHHHHHHHHHCCCCCHHHHEEEECCCEEEE
VGAPADLVTIDTRSTRTAGTGADEHTAVFAATAADVTHVVVDGRVVASEDDHEDIGRELA
ECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEECCCCHHHHHHHHH
AAMEALWQAP
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA