| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718544
Identifier: 119718544
GI number: 119718544
Start: 4573771
End: 4574610
Strand: Reverse
Name: 119718544
Synonym: Noca_4325
Alternate gene names: NA
Gene position: 4574610-4573771 (Counterclockwise)
Preceding gene: 119718545
Following gene: 119718542
Centisome position: 91.75
GC content: 79.64
Gene sequence:
>840_bases ATGCGCCGACGGGCCTTCCTCGCCCTCCCGGCTCTCGCCGGCCCCGCGGCCTGCGGCCTGGACGGCGCGGGCGGCGCGGG CGGCGCGGGCGGCGCGGGCGCCGCGGGCGGTGGGCGGCCGGTGAGCACGCCCGGCACACGGCGGATCGGCTACGGCGACC ACCCGGCGCAGTACGCCGAGCTGACCCGCCCGCCCGGCACCCCGCGCGGCGCCGCGGTCGTGGTGCACGGCGGGTTCTGG AAGCCGCAGTACGGCATCGAGTACGCCCGCCCACTGGTGCCGAGCCTGGTCACGGCCGGCTGGGCGGTGTGGGCGATCGA GTACCGGCGCGGCACCGGCGCCGCGGACACGCTCGCCGACGTCCGGGCGGCGATCGACGCGCTGCCCGACGCGCGCCCGG AGGACGCCGGACCGGTGGTCGGCATCGGCCACTCCGCCGGCGGCCACCTGGTCACCTGGGCGGCCGGCGGCGGCGGCCTG ACCCACGTCGTCTCCCAGGCGGGGGTGCTCGACCTGCGCTCGGCGTACGAGCTGGGTCTGGGCGGTGGCGCGGTCGAGGC GTTCCTCGGCCATCCGCCCGGCCCGGCCGACGCCGCGGTCGACCCGATCCGCCAGGTGCCCTTGGCGGTCCCGGTCTGGT GCGTGCACGGCGCGGCCGACGACGTCGTCCCGATCGGCCAGTCCGAGGCGTACGTCGCCGCCGCGCGGTCGGCCGGAGCG GTCGCCGAGCTGGTCCGGGTCGCGGGCGACCACTTCGCGGTGGTCGACCCGGACTCGCCCGCCTGGGACCGCACGCTGGA GATCCTGCGGGCGATCCCCGACGAGCCCGCGGCCGGCTGA
Upstream 100 bases:
>100_bases TCGGCCGAAACTTCGCCCGCGAAGTTCCGGTATTGCCCGTCCGATGTGACTCCTGGGACTCGGACCAGTCCGATCGGCCG GCCGGCTCCGAACCCCCCGT
Downstream 100 bases:
>100_bases GCCGGGTCCGTCACGGGAGGGCCGGGCCGACCACCTCCAGCCGCTCGGCGAGCACTCCGGCCCAGGCCAGGTCGGTGACG TACGACGTCACCAGGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Esterase; Hydrolase; Esterase/Lipase-Like Protein; Dienelactone Hydrolase; Esterase/Lipase
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MRRRAFLALPALAGPAACGLDGAGGAGGAGGAGAAGGGRPVSTPGTRRIGYGDHPAQYAELTRPPGTPRGAAVVVHGGFW KPQYGIEYARPLVPSLVTAGWAVWAIEYRRGTGAADTLADVRAAIDALPDARPEDAGPVVGIGHSAGGHLVTWAAGGGGL THVVSQAGVLDLRSAYELGLGGGAVEAFLGHPPGPADAAVDPIRQVPLAVPVWCVHGAADDVVPIGQSEAYVAAARSAGA VAELVRVAGDHFAVVDPDSPAWDRTLEILRAIPDEPAAG
Sequences:
>Translated_279_residues MRRRAFLALPALAGPAACGLDGAGGAGGAGGAGAAGGGRPVSTPGTRRIGYGDHPAQYAELTRPPGTPRGAAVVVHGGFW KPQYGIEYARPLVPSLVTAGWAVWAIEYRRGTGAADTLADVRAAIDALPDARPEDAGPVVGIGHSAGGHLVTWAAGGGGL THVVSQAGVLDLRSAYELGLGGGAVEAFLGHPPGPADAAVDPIRQVPLAVPVWCVHGAADDVVPIGQSEAYVAAARSAGA VAELVRVAGDHFAVVDPDSPAWDRTLEILRAIPDEPAAG >Mature_279_residues MRRRAFLALPALAGPAACGLDGAGGAGGAGGAGAAGGGRPVSTPGTRRIGYGDHPAQYAELTRPPGTPRGAAVVVHGGFW KPQYGIEYARPLVPSLVTAGWAVWAIEYRRGTGAADTLADVRAAIDALPDARPEDAGPVVGIGHSAGGHLVTWAAGGGGL THVVSQAGVLDLRSAYELGLGGGAVEAFLGHPPGPADAAVDPIRQVPLAVPVWCVHGAADDVVPIGQSEAYVAAARSAGA VAELVRVAGDHFAVVDPDSPAWDRTLEILRAIPDEPAAG
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27884; Mature: 27884
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRAFLALPALAGPAACGLDGAGGAGGAGGAGAAGGGRPVSTPGTRRIGYGDHPAQYAE CCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH LTRPPGTPRGAAVVVHGGFWKPQYGIEYARPLVPSLVTAGWAVWAIEYRRGTGAADTLAD HCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHH VRAAIDALPDARPEDAGPVVGIGHSAGGHLVTWAAGGGGLTHVVSQAGVLDLRSAYELGL HHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHCC GGGAVEAFLGHPPGPADAAVDPIRQVPLAVPVWCVHGAADDVVPIGQSEAYVAAARSAGA CCHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHH VAELVRVAGDHFAVVDPDSPAWDRTLEILRAIPDEPAAG HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRRRAFLALPALAGPAACGLDGAGGAGGAGGAGAAGGGRPVSTPGTRRIGYGDHPAQYAE CCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH LTRPPGTPRGAAVVVHGGFWKPQYGIEYARPLVPSLVTAGWAVWAIEYRRGTGAADTLAD HCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHH VRAAIDALPDARPEDAGPVVGIGHSAGGHLVTWAAGGGGLTHVVSQAGVLDLRSAYELGL HHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHCC GGGAVEAFLGHPPGPADAAVDPIRQVPLAVPVWCVHGAADDVVPIGQSEAYVAAARSAGA CCHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHH VAELVRVAGDHFAVVDPDSPAWDRTLEILRAIPDEPAAG HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA