| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718529
Identifier: 119718529
GI number: 119718529
Start: 4553045
End: 4555807
Strand: Reverse
Name: 119718529
Synonym: Noca_4310
Alternate gene names: NA
Gene position: 4555807-4553045 (Counterclockwise)
Preceding gene: 119718533
Following gene: 119718527
Centisome position: 91.37
GC content: 73.07
Gene sequence:
>2763_bases GTGTGGATCCCGACAGAGCATGACGCGGAGACCCGCCGGGACCACCGGGAGCGGGCGGGGCGTGGGTCAGGCCTGGTCGG TGTCGGCGTACTGCTCGGAGTGGGAGTAGTAGCCGAGAGCGGTGCTCAGGCTCTCCAGCGAGCGCCGGGCGGCGAGGGCG AACTCAGGTGCAGGGTCTCGGTCCAGGTCGTCGTGGCGGATGGCCCCGAGCCCGATGCTCGGTGCGGCGTTCGGCTCGTC GGCGCGCAGCATCGCGACCGCGGTGACCTCATCCCCGTCGTCGGACAGCTCGATGTCGACGTGCCAGGTGGTGGTCTGCA TGTCCTGCTTCTCTCCTTGTTCGCAGGGACGCTCCTCGTCCCGATGCGAGTCAACCCGGCTGTGACGGGTGGGACCACGG ACCACCTTCACCCCTGGGCGGGGACCTTGGTCCCGTTGCGACCGGGCCACGTGACGGCCGCCACCGTCCGTCGTTGTCGA GGCATGCGCTCGCGTCTCCTGCTGGTCCTCCTCGCCCTCGTGGCCCCGGTCCTGGTCGCCCTCCCGAGCGGGGGCAGCGC GGCTGCGACCCGCGGCGCGCTGCAGGTGCAGGTGCTCTCGAACCGGGCCGACCTGATCTCGGGTGGGGACGCGCTCGTCG CCGTGCGCATCCCGGCGGGCGTGGACCCCGGCCGGGTCCGGGTGGTCGTGGACGACCGCGACGTGACGGACCGGTTCGCG GTCCGCGCCGACGGCCGGTACGTCGGTCTGGTCGACGGCCTCGCGCTCGGCCGCAACGTGCTGCGGGCGACGGTGCCGGG AGTGAGCGGTGTGGCCGGCGACCACGCGGTGATCGTCGACCACCCGAACGGCGGGCCGGTCTTCTCCGGCCCGCAGACCG AGCACTACCGCTGCCAGGAGTCCGCGCGCGACGCCCAGTGCAACGAGCCGGCGACCTACGACTACCTCTACAGGTCGACC GACCCGCTGACCCCCGACCTGCAGCCCTACGACCCCGACAACCCGCCCTCGGACGTCGCCACCACGACCACCGACCAGGG CGTGGAGGTGCCGTTCGTGGTCCGTCGCGAGCGGGGCTACCAGGACCGTGACCGCTACACGATCCTCACCCTGTTCCAGC CCGGCCGGCCGTGGCGCGCCTGGTCCCCGCAGGAGCAGTGGAACCACAAGCTGCTGGTCACCCACGGGGGCGGCTGCGGC GCGTCGTACACCCCCGGGTCCCCGCCGCTCGCCGACTACTCCGGCACCTTCGACGGCGTCCCGCTGGTGACGCCGAGCTA TGTCACCGCCCTCGGCCGGGGCTTCGCCGTGCTCTCGACCGCCCTGGACAACACCGGCCACAACTGCAGCGTCGCGATGA ACGCGGAGTCGGTGCTGATGGCCAAGGAGCGGCTGGTCGAGCAGTACGGCGAGCTGCGCTACACGATCGGCACCGGCTGC TCGGGCGGCTCGATCGCCCAGCACACCGTGGCGAACGCCTACCCCGGGATCTACCAGGGGCTCGTGACGACCTGCTCCTA CCCGGACACGTTCACCGCCGGCGCCCAGTTCGCCGACTACCACCTGCTGCGGCTCTACTTCGAGGACCCGTCGCGCTGGG GCCCCGGCGTCGTGTGGACGCCGGTGCAGATGGCGATGGTCGAGGGGCACCTCTCGCACGTCAACGCCGTGGTCGCCGAC GAGGGCCTGTTCAAGGCGGCGCTGGACCCGGAGCACGCCTGCTCCGGCACCGTCGACCCCCGGCCGGGCGACCCGGCCAC CCGCTACGACTCCGAGACCAACCCGGGCGGGGTGCGCTGCTCGGTGCTCGACCTGCTGGTCAACCAGCTGGGCCGCCGGC CCGCCTCGGTCTGGACGCCGCAGGAGCAGGCCGCCGGGCACGGCTTCGGCGGCATCCCGTTCTCGAACACGGGCGTCCTC TACGGGCTCGCCGAGCTGAAGGCGGGCACCATCACGACCGCCCAGTTCGTGGACCTGAACGCCAAGCTCGGCGGCCTCGA CGTCGACTCCCAGGCGATCCCGGAGCGGATCGCCGGCGACCCGGCCTCGATCGCGCGCGCCTACCGCACCGGCCTGATCA ACGAGGCGAACCACCTCGACGAGGTCGCGATGATCAACCACGGCGGGCCGGACCCGGGCATCGCGCACGACTACGCCCAC GCGTTCTGGACCCAGGAGCGGCTGCAGGCCGACCAGGGGAACACCGACAACCGGGTGATGTGGTTCGGGCCGACGCCGCT GATCGGCGACGTGCGCTGGGCCGGCGAGGCCCTGCTCGCCATGGACCGGTGGCTCGCCGCCGTCGAGCAGGACCACGGCC CCGAACCGCTGGCGCAGAAGATCGCCGCCGACCGTCCCGCCGACGTCACCGACCGCTGCGTGGTCGCGGAGGCCGCCGAC GCGTGCGACGTGCAGGAGCTCCAGGTCCTCCAGACCCGCCTCTCCACCCCACGCCAGGAGGCCGGCGGCCCGCTCGCCAA CGACGTCGTCGCCTGCCGGCTCACTCCGCTCGACCGCGCCGCCTTCGACTTCCTGCTGGTCCCGTTCACCGACGCCGAGT GGGCCACCCTCCAGGCGACCTTCCCCGACGGCGTCTGTGACTGGTCCCAGCCCGGCCTCGGCCAGGGCCCCGCCGAGACC TGGCTGCGCTACGACGCCGCCGACGGCGGCCCGGCGTACGGCGGCCGCAACCTGCCGCCCCCGCCCGCCGACTCCGGCCT CGGCACCCTCGGCCCGGTGTGGACGGAGATGCTGACCAAGTAG
Upstream 100 bases:
>100_bases CAGCAGCTCGAACGAGCGCAGGTCGGGACCGGGGTCGCCGACGGCGTCGTCGTACCCGTCCGAGCTCATGGACCGATCAT CGCCCAGGTGCCGTGGAATT
Downstream 100 bases:
>100_bases CTGCCCGGGTGGCCCGGGCCGGCCCGATGTGGTCTCGGATGGCCCCCGGGGTCGGCGGTGTGCTGGCAACCGGATCAGAC CCAGATGGGTTGCCGAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 920; Mature: 920
Protein sequence:
>920_residues MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVSVQVVVADGPEPDARCGVRLV GAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLVPMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCR GMRSRLLLVLLALVAPVLVALPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQESARDAQCNEPATYDYLYRST DPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGYQDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCG ASYTPGSPPLADYSGTFDGVPLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWTPVQMAMVEGHLSHVNAVVAD EGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRCSVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVL YGLAELKAGTITTAQFVDLNAKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQKIAADRPADVTDRCVVAEAAD ACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRAAFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAET WLRYDAADGGPAYGGRNLPPPPADSGLGTLGPVWTEMLTK
Sequences:
>Translated_920_residues MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVSVQVVVADGPEPDARCGVRLV GAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLVPMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCR GMRSRLLLVLLALVAPVLVALPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQESARDAQCNEPATYDYLYRST DPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGYQDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCG ASYTPGSPPLADYSGTFDGVPLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWTPVQMAMVEGHLSHVNAVVAD EGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRCSVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVL YGLAELKAGTITTAQFVDLNAKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQKIAADRPADVTDRCVVAEAAD ACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRAAFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAET WLRYDAADGGPAYGGRNLPPPPADSGLGTLGPVWTEMLTK >Mature_920_residues MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVSVQVVVADGPEPDARCGVRLV GAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLVPMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCR GMRSRLLLVLLALVAPVLVALPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQESARDAQCNEPATYDYLYRST DPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGYQDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCG ASYTPGSPPLADYSGTFDGVPLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWTPVQMAMVEGHLSHVNAVVAD EGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRCSVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVL YGLAELKAGTITTAQFVDLNAKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQKIAADRPADVTDRCVVAEAAD ACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRAAFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAET WLRYDAADGGPAYGGRNLPPPPADSGLGTLGPVWTEMLTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97826; Mature: 97826
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVS CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE VQVVVADGPEPDARCGVRLVGAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLV EEEEEECCCCCCHHCCEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEE PMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCRGMRSRLLLVLLALVAPVLVA EEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE LPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA CCCCCCCHHHCCEEEEEEECCCCCEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEE VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQE EEECCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH SARDAQCNEPATYDYLYRSTDPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGY HHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCC QDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCGASYTPGSPPLADYSGTFDGV CCCCCEEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC CCCCHHHHHHHHCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCEEEEEECCC SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWT CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEEECCCCCCCCCEEEC PVQMAMVEGHLSHVNAVVADEGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRC HHHHHHHHHHHHHHHEEEECCCCCEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEH SVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVLYGLAELKAGTITTAQFVDLN HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEHHHHCCCCEEEEEEEEEC AKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCHHHHHH AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQK HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IAADRPADVTDRCVVAEAADACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRA HHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCC AFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAETWLRYDAADGGPAYGGRNLPP CEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCC PPADSGLGTLGPVWTEMLTK CCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MWIPTEHDAETRRDHRERAGRGSGLVGVGVLLGVGVVAESGAQALQRAPGGEGELRCRVS CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE VQVVVADGPEPDARCGVRLVGAQHRDRGDLIPVVGQLDVDVPGGGLHVLLLSLFAGTLLV EEEEEECCCCCCHHCCEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHEEE PMRVNPAVTGGTTDHLHPWAGTLVPLRPGHVTAATVRRCRGMRSRLLLVLLALVAPVLVA EEECCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE LPSGGSAAATRGALQVQVLSNRADLISGGDALVAVRIPAGVDPGRVRVVVDDRDVTDRFA CCCCCCCHHHCCEEEEEEECCCCCEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEE VRADGRYVGLVDGLALGRNVLRATVPGVSGVAGDHAVIVDHPNGGPVFSGPQTEHYRCQE EEECCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHH SARDAQCNEPATYDYLYRSTDPLTPDLQPYDPDNPPSDVATTTTDQGVEVPFVVRRERGY HHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCC QDRDRYTILTLFQPGRPWRAWSPQEQWNHKLLVTHGGGCGASYTPGSPPLADYSGTFDGV CCCCCEEEEEEECCCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PLVTPSYVTALGRGFAVLSTALDNTGHNCSVAMNAESVLMAKERLVEQYGELRYTIGTGC CCCCHHHHHHHHCCHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHCCEEEEEECCC SGGSIAQHTVANAYPGIYQGLVTTCSYPDTFTAGAQFADYHLLRLYFEDPSRWGPGVVWT CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEEECCCCCCCCCEEEC PVQMAMVEGHLSHVNAVVADEGLFKAALDPEHACSGTVDPRPGDPATRYDSETNPGGVRC HHHHHHHHHHHHHHHEEEECCCCCEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEH SVLDLLVNQLGRRPASVWTPQEQAAGHGFGGIPFSNTGVLYGLAELKAGTITTAQFVDLN HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEHHHHCCCCEEEEEEEEEC AKLGGLDVDSQAIPERIAGDPASIARAYRTGLINEANHLDEVAMINHGGPDPGIAHDYAH CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHEEEEECCCCCCCCHHHHHH AFWTQERLQADQGNTDNRVMWFGPTPLIGDVRWAGEALLAMDRWLAAVEQDHGPEPLAQK HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IAADRPADVTDRCVVAEAADACDVQELQVLQTRLSTPRQEAGGPLANDVVACRLTPLDRA HHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECCCCCC AFDFLLVPFTDAEWATLQATFPDGVCDWSQPGLGQGPAETWLRYDAADGGPAYGGRNLPP CEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCC PPADSGLGTLGPVWTEMLTK CCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA