| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718502
Identifier: 119718502
GI number: 119718502
Start: 4525730
End: 4526056
Strand: Reverse
Name: 119718502
Synonym: Noca_4283
Alternate gene names: NA
Gene position: 4526056-4525730 (Counterclockwise)
Preceding gene: 119718503
Following gene: 119718501
Centisome position: 90.78
GC content: 69.11
Gene sequence:
>327_bases GTGACCAGCTGGCACCCGGTGGCGAGCGTCAAGGACCTGGAAGCACGCAAGAAGACGGCCGTCGAGGTCGACGGCACGAC GATCGCGCTGTTCTACATCCGCGGCCACGTCTACGCGCTGCACGACACCTGCATCCACGAGCAGCGGCAGCTGAGCAAGG GCGCCGTCCTGTTCGGCAAGGTCGTCTGCCCGGGCCACCAGTGGAAGTTCGACCCTGCGTCGGGGGAGCCCGACGGCCAG GACGGCTGCCAGCCGACGTACCCGGTGCGGGTGGCGGAGGACGGGACGATCTCGGTCGCCCTCGAGACCTCGGTGGTGAC CCGATGA
Upstream 100 bases:
>100_bases CGTCGCAGCGCGGCGGCGACCACCCGGCACCGGCTGCCCGGACCACGAGGCCCACAACACGGGGCCCAGCACGAGGCCCG ATGATCGAAGGGAGCTGTCG
Downstream 100 bases:
>100_bases GCGACCCCACGGTGGTCATCATCGGCGGCGGCCAGGCCGGCGCGGTCGCCACGCGCGCCCTGCGCCGCAAGGGTCACGCC GGGCGGATCGTCCTGGTGGG
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: Rieske Region; Dioxygenase Ferredoxin Component
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTSWHPVASVKDLEARKKTAVEVDGTTIALFYIRGHVYALHDTCIHEQRQLSKGAVLFGKVVCPGHQWKFDPASGEPDGQ DGCQPTYPVRVAEDGTISVALETSVVTR
Sequences:
>Translated_108_residues MTSWHPVASVKDLEARKKTAVEVDGTTIALFYIRGHVYALHDTCIHEQRQLSKGAVLFGKVVCPGHQWKFDPASGEPDGQ DGCQPTYPVRVAEDGTISVALETSVVTR >Mature_107_residues TSWHPVASVKDLEARKKTAVEVDGTTIALFYIRGHVYALHDTCIHEQRQLSKGAVLFGKVVCPGHQWKFDPASGEPDGQD GCQPTYPVRVAEDGTISVALETSVVTR
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11807; Mature: 11676
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSWHPVASVKDLEARKKTAVEVDGTTIALFYIRGHVYALHDTCIHEQRQLSKGAVLFGK CCCCCCCCCCHHCCCCCCEEEEECCCEEEEEEEECEEEEEHHHHHHHHHHCCCCCEEEEE VVCPGHQWKFDPASGEPDGQDGCQPTYPVRVAEDGTISVALETSVVTR EECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEEECC >Mature Secondary Structure TSWHPVASVKDLEARKKTAVEVDGTTIALFYIRGHVYALHDTCIHEQRQLSKGAVLFGK CCCCCCCCCHHCCCCCCEEEEECCCEEEEEEEECEEEEEHHHHHHHHHHCCCCCEEEEE VVCPGHQWKFDPASGEPDGQDGCQPTYPVRVAEDGTISVALETSVVTR EECCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA