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The map label for this gene is csoR [H]

Identifier: 119718486

GI number: 119718486

Start: 4507906

End: 4508238

Strand: Reverse

Name: csoR [H]

Synonym: Noca_4267

Alternate gene names: 119718486

Gene position: 4508238-4507906 (Counterclockwise)

Preceding gene: 119718487

Following gene: 119718483

Centisome position: 90.42

GC content: 67.87

Gene sequence:

>333_bases
ATGACAGAGCACGGGGCAGAGGTCGGGACACACTGCGGCGTGGAGCACCAGCACGGCTACATCCACCGCAAGGACGACTA
CCTCAAGCGGCTGCGCCGCATCGAGGGGCAGGCGCGCGGGCTGCAGCGGATGGTCGAGGACGAGAAGTACTGCATCGACA
TCCTCACCCAGGTCTCCGCGATGACCAAGGCCCTCCAGGCCGTCTCCCTCGGCCTGCTCGAGGAGCACATGTCCCACTGC
GTCCTCGACGCCGCCCGCTCCGAGGACGATGCCGCCGCCCAGGAGAAGATCACCGAGGTGCTCGACGCCGTCTCTCGCCT
GGTCCGCTCCTAG

Upstream 100 bases:

>100_bases
ACCAGATCTTGGGCGTGGTGCCGGAGCCGCGGCACGAGGCCTGACGCCCGGCCGCGCGCCGACTTCCGCACCAGATACCC
CTCCCGGGTATGCTCTGGGC

Downstream 100 bases:

>100_bases
ATCGACGATAGTCCCTGACGATTACGCGGTCTCCAGCGCGAAATCACCGCACAATCGTCAGGGACTATCGTCCGCGCAGA
CGAGCTCAGGCTGCTCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTEHGAEVGTHCGVEHQHGYIHRKDDYLKRLRRIEGQARGLQRMVEDEKYCIDILTQVSAMTKALQAVSLGLLEEHMSHC
VLDAARSEDDAAAQEKITEVLDAVSRLVRS

Sequences:

>Translated_110_residues
MTEHGAEVGTHCGVEHQHGYIHRKDDYLKRLRRIEGQARGLQRMVEDEKYCIDILTQVSAMTKALQAVSLGLLEEHMSHC
VLDAARSEDDAAAQEKITEVLDAVSRLVRS
>Mature_109_residues
TEHGAEVGTHCGVEHQHGYIHRKDDYLKRLRRIEGQARGLQRMVEDEKYCIDILTQVSAMTKALQAVSLGLLEEHMSHCV
LDAARSEDDAAAQEKITEVLDAVSRLVRS

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 12370; Mature: 12239

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHGAEVGTHCGVEHQHGYIHRKDDYLKRLRRIEGQARGLQRMVEDEKYCIDILTQVSA
CCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTKALQAVSLGLLEEHMSHCVLDAARSEDDAAAQEKITEVLDAVSRLVRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEHGAEVGTHCGVEHQHGYIHRKDDYLKRLRRIEGQARGLQRMVEDEKYCIDILTQVSA
CCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTKALQAVSLGLLEEHMSHCVLDAARSEDDAAAQEKITEVLDAVSRLVRS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]