| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is fur [H]
Identifier: 119718470
GI number: 119718470
Start: 4489862
End: 4490281
Strand: Reverse
Name: fur [H]
Synonym: Noca_4251
Alternate gene names: 119718470
Gene position: 4490281-4489862 (Counterclockwise)
Preceding gene: 119718471
Following gene: 119718469
Centisome position: 90.06
GC content: 70.24
Gene sequence:
>420_bases GTGACCGAGGAGCTCGCGGCGCGGCTGCGGGAGCAGGGCTACCGACTCACCCCGCAGCGCCAGCTGGTGCTGCAGGCGGT CGAGAAGCTCGGCCACGCGACGCCGGACGAGGTGCTCGCCGAGGTGCACGCCCAGTCCAGCGCGGTCAACGTCTCCACGA TCTACCGCACCCTGGAGGTGCTCGAGGAGCTCGGCCTGGTGCGGCACGCGCACCTGTCCGACCGGGCGCCGACGTACCAC TCGGTGACCGACCGCGAGCACTTCCACCTGGTCTGCCGGAATTGCCACAAGGTCGTCTCCGTTGACCCAGAAGTGATCGG GCCGCTCGCCGAGCGGCTCGTGCGCGACCATGGCTTCGTCATCGACGTGGGCCACCTGGCGGTCTTCGGCCGCTGCACCG ACTGCGAGGAGGACCGATGA
Upstream 100 bases:
>100_bases CCATGGGCCAGCCGCTCCAGCCGCACCTGTGGGCGCGGCTGGTCCGGCAGTGACCCCCGGCGCGTGAGCCCAGGACCACC ACGACCATGAGGCAGGAGCA
Downstream 100 bases:
>100_bases GGAGCCCGCTGCTGGACCTGCCCGGAGCCGTGGCCGGGGACGGCGTCGACCGTGACGTGGCCGCGCACTACGGCTCGTTC AACGGCGAGCAGCGCACCCT
Product: FUR family nickel uptake regulator
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTEELAARLREQGYRLTPQRQLVLQAVEKLGHATPDEVLAEVHAQSSAVNVSTIYRTLEVLEELGLVRHAHLSDRAPTYH SVTDREHFHLVCRNCHKVVSVDPEVIGPLAERLVRDHGFVIDVGHLAVFGRCTDCEEDR
Sequences:
>Translated_139_residues MTEELAARLREQGYRLTPQRQLVLQAVEKLGHATPDEVLAEVHAQSSAVNVSTIYRTLEVLEELGLVRHAHLSDRAPTYH SVTDREHFHLVCRNCHKVVSVDPEVIGPLAERLVRDHGFVIDVGHLAVFGRCTDCEEDR >Mature_138_residues TEELAARLREQGYRLTPQRQLVLQAVEKLGHATPDEVLAEVHAQSSAVNVSTIYRTLEVLEELGLVRHAHLSDRAPTYHS VTDREHFHLVCRNCHKVVSVDPEVIGPLAERLVRDHGFVIDVGHLAVFGRCTDCEEDR
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15681; Mature: 15550
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEELAARLREQGYRLTPQRQLVLQAVEKLGHATPDEVLAEVHAQSSAVNVSTIYRTLEV CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LEELGLVRHAHLSDRAPTYHSVTDREHFHLVCRNCHKVVSVDPEVIGPLAERLVRDHGFV HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE IDVGHLAVFGRCTDCEEDR EEHHHHHHHCCCCCCCCCC >Mature Secondary Structure TEELAARLREQGYRLTPQRQLVLQAVEKLGHATPDEVLAEVHAQSSAVNVSTIYRTLEV CHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH LEELGLVRHAHLSDRAPTYHSVTDREHFHLVCRNCHKVVSVDPEVIGPLAERLVRDHGFV HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCE IDVGHLAVFGRCTDCEEDR EEHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083178 [H]