Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119718457

Identifier: 119718457

GI number: 119718457

Start: 4476678

End: 4477190

Strand: Reverse

Name: 119718457

Synonym: Noca_4238

Alternate gene names: NA

Gene position: 4477190-4476678 (Counterclockwise)

Preceding gene: 119718458

Following gene: 119718456

Centisome position: 89.8

GC content: 67.64

Gene sequence:

>513_bases
ATGAGGAAGTCGACGAAGGGCGCCCTGGCTGCTGGAGCCGCCGCGCTGCTGCTCTTCGGGGGCATGGGCACGCGGGCGGG
CTGGAGCGATGACGGGACGTTCACCGGCACGGACATCGGCACCGGCCACCTGAACCTGATCAACGCGACCTGCAACGGAT
GGAAGATCGGCGCCTCCGCGTTCGATCCGGCCACGATCAAGATCGTCCCGGGGTCGGTGCTCACCCAGGTCTGCACCTTC
GAGGTCGACGCCGTCGGCACCAACCTGAAGGCCACGCTCAGCGTCACGGCACCGAGCTTCGCGACGGCCAACGGCCTCAC
CGGCGTGCTGACGACGGCCGCAACCTATGTGAACAACGCAGACAGCTCACCGATCGACGCGACGACCCAGCTCGCTGACG
GAACCGTCATCAAGGCGACGATGACCGTGACGCTGCCGGCCTCCGCCGACAACACGATCCAGGGCCTCACCGCGACGCTC
GACAACGTCACGGTGACGGCGACCCAGGCCTGA

Upstream 100 bases:

>100_bases
GCTAGACCGGGTGCGGCGGTCCCTCAGCCTCGGTATGACTCGCGCCACACTCGGGTCACCCCGGTCGGAGGGGACCGGGT
GTTCCGATGGGAGGGGACGC

Downstream 100 bases:

>100_bases
CACCGGGTACGGCGCCCCGGGCTCGACCGGAGCGCCGGCTCCACGCCATGGCCGCGGACTCCCGGGACTCCTTCCTCGAC
GGCTTCCGCCGGGCGGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASAFDPATIKIVPGSVLTQVCTF
EVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNADSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATL
DNVTVTATQA

Sequences:

>Translated_170_residues
MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASAFDPATIKIVPGSVLTQVCTF
EVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNADSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATL
DNVTVTATQA
>Mature_170_residues
MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASAFDPATIKIVPGSVLTQVCTF
EVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNADSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATL
DNVTVTATQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16968; Mature: 16968

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASA
CCCCCCCCHHHHHHEEEEECCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCEEECCCC
FDPATIKIVPGSVLTQVCTFEVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNA
CCCEEEEEECCHHHHHHHEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
DSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATLDNVTVTATQA
CCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCEEEECCCEEEEEECC
>Mature Secondary Structure
MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTGTDIGTGHLNLINATCNGWKIGASA
CCCCCCCCHHHHHHEEEEECCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCEEECCCC
FDPATIKIVPGSVLTQVCTFEVDAVGTNLKATLSVTAPSFATANGLTGVLTTAATYVNNA
CCCEEEEEECCHHHHHHHEEEEECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
DSSPIDATTQLADGTVIKATMTVTLPASADNTIQGLTATLDNVTVTATQA
CCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA