Click here to switch to the map view.

The map label for this gene is 119718451

Identifier: 119718451

GI number: 119718451

Start: 4473253

End: 4473765

Strand: Reverse

Name: 119718451

Synonym: Noca_4232

Alternate gene names: NA

Gene position: 4473765-4473253 (Counterclockwise)

Preceding gene: 119718453

Following gene: 119718450

Centisome position: 89.73

GC content: 75.83

Gene sequence:

>513_bases
GTGAGCCCCGGCGCCTGGATCGCGATCGCCGCGGTGGCCCTCGCGGTCGCCTTCGGCTCCTACCGCGCGCTCACCGACGG
CCGGTTCCGCGGCACCCACCGCGTCCGCCAGTCCCCGGCGACCCCGACGAGCCCGGCCGCCCCGACCTCGGAGGACGCCG
CCGCGGTGGTCGAGGGCGGAGTGTCGGCGACGAGCCTCGGAACCACCTGGACCCAGGTCACGAAGGCCCTCCCGGACGCG
ACCCTGGGGGAGCAGGCCACCCTGCTGCAGTTCTCCTCGGCGTTCTGCGCGCCCTGCCGGGTCACCCGGCGCACCCTGTC
CGAGGTGGCCGACGTCGTGCCCGGCGTGGAGCACCTCGAGGTCGACGCCGAGCACCACCTCGACCTGGTCCGCGCGCTCG
GGATCATGCGCACGCCCACCACGCTGGTGCTCGACGCCACCGGCCAGGAGGTCACCCGGGCCGTCGGCGCGCCGCGCAAG
GAGCAGGTGATCGCGGCCCTGGGCATCACCTGA

Upstream 100 bases:

>100_bases
AGCGCGACCGCGATCGTCTGTCTCGAGAAGGGCGCGGCCACGGGGCCAACGTTCTCAGGTGCGGTGGAATGTCGCCGTGC
TTTCGCTGGTTGGGTACGAC

Downstream 100 bases:

>100_bases
TGTCCGCATCCTGGACTGGTGTCTCAATCCGCGAGACGGGCGCTGTCCGCCCCGGCGGGTCGGTCCCTACTGTGGTGCCC
ATGTTCTCGACCATGCTGAC

Product: putative thioredoxin

Products: NA

Alternate protein names: Thioredoxin Domain-Containing Protein; Thiol-Disulfide Isomerase-Like Thioredoxin; ThiX Family Protein; Thioredoxin Domain Protein; Thioredoxin-Related

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSPGAWIAIAAVALAVAFGSYRALTDGRFRGTHRVRQSPATPTSPAAPTSEDAAAVVEGGVSATSLGTTWTQVTKALPDA
TLGEQATLLQFSSAFCAPCRVTRRTLSEVADVVPGVEHLEVDAEHHLDLVRALGIMRTPTTLVLDATGQEVTRAVGAPRK
EQVIAALGIT

Sequences:

>Translated_170_residues
MSPGAWIAIAAVALAVAFGSYRALTDGRFRGTHRVRQSPATPTSPAAPTSEDAAAVVEGGVSATSLGTTWTQVTKALPDA
TLGEQATLLQFSSAFCAPCRVTRRTLSEVADVVPGVEHLEVDAEHHLDLVRALGIMRTPTTLVLDATGQEVTRAVGAPRK
EQVIAALGIT
>Mature_169_residues
SPGAWIAIAAVALAVAFGSYRALTDGRFRGTHRVRQSPATPTSPAAPTSEDAAAVVEGGVSATSLGTTWTQVTKALPDAT
LGEQATLLQFSSAFCAPCRVTRRTLSEVADVVPGVEHLEVDAEHHLDLVRALGIMRTPTTLVLDATGQEVTRAVGAPRKE
QVIAALGIT

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17670; Mature: 17539

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGAWIAIAAVALAVAFGSYRALTDGRFRGTHRVRQSPATPTSPAAPTSEDAAAVVEGG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
VSATSLGTTWTQVTKALPDATLGEQATLLQFSSAFCAPCRVTRRTLSEVADVVPGVEHLE
CCHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEE
VDAEHHLDLVRALGIMRTPTTLVLDATGQEVTRAVGAPRKEQVIAALGIT
CCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SPGAWIAIAAVALAVAFGSYRALTDGRFRGTHRVRQSPATPTSPAAPTSEDAAAVVEGG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHCC
VSATSLGTTWTQVTKALPDATLGEQATLLQFSSAFCAPCRVTRRTLSEVADVVPGVEHLE
CCHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEE
VDAEHHLDLVRALGIMRTPTTLVLDATGQEVTRAVGAPRKEQVIAALGIT
CCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA