| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is paaG [H]
Identifier: 119718360
GI number: 119718360
Start: 4372974
End: 4373723
Strand: Reverse
Name: paaG [H]
Synonym: Noca_4141
Alternate gene names: 119718360
Gene position: 4373723-4372974 (Counterclockwise)
Preceding gene: 119718361
Following gene: 119718355
Centisome position: 87.72
GC content: 76.53
Gene sequence:
>750_bases ATGAGCGGGACCGTGCGCTACGAGCTCACCGACGGCGTCGCCCACCTGGTCCTCGACCGTCCCGACGCCGCCAACGCGAT CGACATGGACACCGCGCTCGCCCTCGGCGACGCCGTCGACACCGCAGTGGCCGACGACGCCGTTCGGGTGCTGCTGCTGA CCGGCGCCGGACCGCGCTTCTGCGCCGGCGGCGACGTGGCGTGGATGCTCGGGGACGACGACCGCGGCGCCCGGGTCGAG GCGCTGGCCACGGTCCTCGACGGCGTCCTCGTCCGGCTCCACTCCTGCGCCAAGCCCGTCGTCGCCGCGGTGCAGGGAGC GGTCGCCGGCGCCGGCCTCGCCGTGATGCTGAGCTGCGACGTGGTGGTCGCCGAGCCGGCCACGAAGTTCGTCGCGGCCT ACGCGGCGGTCGGGCTCTCGCCCGACTGCGGCGTGTCCTGGCTGCTGCCGCGCGCCGTCGGGCAGCAACGCGCGCTCGAG ATGCTGCTCGCTCAGCGCGTCGTCACTGCCGACGAGGCGCTCGCGTGGGGCCTGGTCGGGCAGGTCGCCGACGACCCGGC TGCCGCCGCGGCCGAGCTGGCCGCGCGGATGGCCGCGGGCCCGGCGTACGCGCTCGGGCAGACGCGGCGCCTGGTGCGCG ACGCGTGGGTGCGTGACCGGGGCGCCAGTGGCGCCGACGAGACCCGGACCATCACCCGGGCCGTGCAGACGCCGGAGGCG GACCGGCTGCTCAGCCGTTTCCTCGCGTAG
Upstream 100 bases:
>100_bases GAGTCGCCAAGGACCTGGTCCGCCGCGATCTCGAGCTCGGCATCGTGACGATGTGCATCGGCGGCGGGCAGGCCCTCGCC GCACTCTTCCGGAGAGTGTG
Downstream 100 bases:
>100_bases CCCGGCCACCCAGGCACGGCGACGTGCCGACCGGCCACGGCAACGCGGCGTGCTCAGCCACCCAGCCGTCGAGCGCGGTC GCGACGATGGCCGGCCAGAC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSGTVRYELTDGVAHLVLDRPDAANAIDMDTALALGDAVDTAVADDAVRVLLLTGAGPRFCAGGDVAWMLGDDDRGARVE ALATVLDGVLVRLHSCAKPVVAAVQGAVAGAGLAVMLSCDVVVAEPATKFVAAYAAVGLSPDCGVSWLLPRAVGQQRALE MLLAQRVVTADEALAWGLVGQVADDPAAAAAELAARMAAGPAYALGQTRRLVRDAWVRDRGASGADETRTITRAVQTPEA DRLLSRFLA
Sequences:
>Translated_249_residues MSGTVRYELTDGVAHLVLDRPDAANAIDMDTALALGDAVDTAVADDAVRVLLLTGAGPRFCAGGDVAWMLGDDDRGARVE ALATVLDGVLVRLHSCAKPVVAAVQGAVAGAGLAVMLSCDVVVAEPATKFVAAYAAVGLSPDCGVSWLLPRAVGQQRALE MLLAQRVVTADEALAWGLVGQVADDPAAAAAELAARMAAGPAYALGQTRRLVRDAWVRDRGASGADETRTITRAVQTPEA DRLLSRFLA >Mature_248_residues SGTVRYELTDGVAHLVLDRPDAANAIDMDTALALGDAVDTAVADDAVRVLLLTGAGPRFCAGGDVAWMLGDDDRGARVEA LATVLDGVLVRLHSCAKPVVAAVQGAVAGAGLAVMLSCDVVVAEPATKFVAAYAAVGLSPDCGVSWLLPRAVGQQRALEM LLAQRVVTADEALAWGLVGQVADDPAAAAAELAARMAAGPAYALGQTRRLVRDAWVRDRGASGADETRTITRAVQTPEAD RLLSRFLA
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI4757968, Length=176, Percent_Identity=34.6590909090909, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI49355787, Length=176, Percent_Identity=34.6590909090909, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI25453481, Length=176, Percent_Identity=34.0909090909091, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI51538573, Length=176, Percent_Identity=34.0909090909091, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI221307494, Length=209, Percent_Identity=31.1004784688995, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI4757966, Length=176, Percent_Identity=34.0909090909091, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI51538581, Length=176, Percent_Identity=34.0909090909091, Blast_Score=95, Evalue=7e-20, Organism=Homo sapiens, GI221136756, Length=209, Percent_Identity=31.1004784688995, Blast_Score=94, Evalue=9e-20, Organism=Homo sapiens, GI221136753, Length=209, Percent_Identity=31.1004784688995, Blast_Score=94, Evalue=9e-20, Organism=Homo sapiens, GI116235487, Length=215, Percent_Identity=31.1627906976744, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI260274832, Length=229, Percent_Identity=25.764192139738, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI45643119, Length=229, Percent_Identity=25.764192139738, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI260275230, Length=229, Percent_Identity=25.764192139738, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI70995211, Length=183, Percent_Identity=30.6010928961749, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI31542718, Length=205, Percent_Identity=29.7560975609756, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI68989263, Length=198, Percent_Identity=29.7979797979798, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI194097323, Length=173, Percent_Identity=30.635838150289, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI20127408, Length=184, Percent_Identity=29.3478260869565, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1787660, Length=222, Percent_Identity=36.9369369369369, Blast_Score=117, Evalue=5e-28, Organism=Escherichia coli, GI1787659, Length=239, Percent_Identity=31.3807531380753, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI221142681, Length=221, Percent_Identity=29.8642533936652, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1788597, Length=186, Percent_Identity=37.0967741935484, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790281, Length=175, Percent_Identity=31.4285714285714, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788682, Length=192, Percent_Identity=30.2083333333333, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17560910, Length=197, Percent_Identity=31.9796954314721, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17536985, Length=213, Percent_Identity=29.1079812206573, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17534483, Length=183, Percent_Identity=31.1475409836066, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17535521, Length=208, Percent_Identity=25.9615384615385, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17554946, Length=194, Percent_Identity=29.3814432989691, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25145438, Length=212, Percent_Identity=29.7169811320755, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17549921, Length=229, Percent_Identity=26.6375545851528, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17540306, Length=141, Percent_Identity=31.9148936170213, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI24654903, Length=229, Percent_Identity=24.8908296943231, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI20129971, Length=193, Percent_Identity=28.4974093264249, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24653477, Length=193, Percent_Identity=28.4974093264249, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI21357171, Length=241, Percent_Identity=31.5352697095436, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI19920382, Length=200, Percent_Identity=30.5, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24653139, Length=173, Percent_Identity=30.635838150289, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24650670, Length=211, Percent_Identity=30.8056872037915, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 25641; Mature: 25509
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTVRYELTDGVAHLVLDRPDAANAIDMDTALALGDAVDTAVADDAVRVLLLTGAGPRF CCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCE CAGGDVAWMLGDDDRGARVEALATVLDGVLVRLHSCAKPVVAAVQGAVAGAGLAVMLSCD ECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC VVVAEPATKFVAAYAAVGLSPDCGVSWLLPRAVGQQRALEMLLAQRVVTADEALAWGLVG EEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVADDPAAAAAELAARMAAGPAYALGQTRRLVRDAWVRDRGASGADETRTITRAVQTPEA HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCH DRLLSRFLA HHHHHHHCC >Mature Secondary Structure SGTVRYELTDGVAHLVLDRPDAANAIDMDTALALGDAVDTAVADDAVRVLLLTGAGPRF CCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCE CAGGDVAWMLGDDDRGARVEALATVLDGVLVRLHSCAKPVVAAVQGAVAGAGLAVMLSCD ECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC VVVAEPATKFVAAYAAVGLSPDCGVSWLLPRAVGQQRALEMLLAQRVVTADEALAWGLVG EEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVADDPAAAAAELAARMAAGPAYALGQTRRLVRDAWVRDRGASGADETRTITRAVQTPEA HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCH DRLLSRFLA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]