| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is fabG [H]
Identifier: 119718352
GI number: 119718352
Start: 4364838
End: 4365650
Strand: Reverse
Name: fabG [H]
Synonym: Noca_4133
Alternate gene names: 119718352
Gene position: 4365650-4364838 (Counterclockwise)
Preceding gene: 119718353
Following gene: 119718351
Centisome position: 87.56
GC content: 73.06
Gene sequence:
>813_bases GTGACTTCAACCTCGAGCCCAGCTTCGAGCCCGACCACTGGCTCCCCGGCCCAGCCCCTGCTCGGCAAGGTCGCCCTCGT GACCGGCGGCAGCCGTGGCCTCGGCCGCGCCATGGTGCGCGGTTTCGCCCGCGCCGGCGCCGACGTCGTCATCTCCAGCC GCAAGCTCGACGACTGCCGTGCGCTGGCCGAGGAGGTCGAGCGCGAGCACGGCCGCCGGGCGTTCCCGCACGCTGCGCAC GTCGGCCACTGGGACGAGGTGGGCGCGCTCGTCGAGGCGGCGTACGCCGAGTTCGGCCGGGTCGACGTCCTGGTCAACAA CGCGGGCCTGGCGCCGACGTACCCCGGCCTGGACCAGGTCACCGAGGAGCTCTTCGACAAGGTGATCGGGGTCAACCTCA AGGGCCCGTTCCGGCTCACCGCCCTGGTGGCGACCCGGATGGCCGCCGGCGCCGGCGGCTCGATCATCAACATCAGCAGC AGCGCCGCGGTGCGCCCGATGACCACCGACCTCCCCTACGCCGCCGCCAAGGGCGGCCTCAACGTGCTCACCGCCGGCTT CGCGCAGGCGTTCGGCCCCTCGGTCCGGGTGAACACGATCATGGCCGGCCCGTTCCTGACCGACATGTCGCGAGGCTGGG ACATGGACGCCCTGACCGGCGACCTCGCGCACTACCCGATGCGACGTGCGGGGGACCCCGACGAGGTCGTCGGGGCCGCC GTCTACTTCGCGAGCGACGCCTCGTCGTACACGACGGGCGCGGTGCTGCCCGTCGACGGCGGCCGCGGTGTCGTCAGCTT CGGCTCAGCCTGA
Upstream 100 bases:
>100_bases GCTCCGACGAGATCCAGCGCACGATCATCGCCGAGCGCTGGCTCGGCATGCCGGCCGAGCCGCGCGCCGACAAGGACACC CCGTGGAAGGACCTGCCCCG
Downstream 100 bases:
>100_bases GCGCCGTCCCGACCTCCCGAGGAGCCCCGATGACCACGACCCGCCTCGTCGATGACTCGCTGTTCGCCGCCGACGCCGAC GACCCCGGCCACGGTGGCGT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTSTSSPASSPTTGSPAQPLLGKVALVTGGSRGLGRAMVRGFARAGADVVISSRKLDDCRALAEEVEREHGRRAFPHAAH VGHWDEVGALVEAAYAEFGRVDVLVNNAGLAPTYPGLDQVTEELFDKVIGVNLKGPFRLTALVATRMAAGAGGSIINISS SAAVRPMTTDLPYAAAKGGLNVLTAGFAQAFGPSVRVNTIMAGPFLTDMSRGWDMDALTGDLAHYPMRRAGDPDEVVGAA VYFASDASSYTTGAVLPVDGGRGVVSFGSA
Sequences:
>Translated_270_residues MTSTSSPASSPTTGSPAQPLLGKVALVTGGSRGLGRAMVRGFARAGADVVISSRKLDDCRALAEEVEREHGRRAFPHAAH VGHWDEVGALVEAAYAEFGRVDVLVNNAGLAPTYPGLDQVTEELFDKVIGVNLKGPFRLTALVATRMAAGAGGSIINISS SAAVRPMTTDLPYAAAKGGLNVLTAGFAQAFGPSVRVNTIMAGPFLTDMSRGWDMDALTGDLAHYPMRRAGDPDEVVGAA VYFASDASSYTTGAVLPVDGGRGVVSFGSA >Mature_269_residues TSTSSPASSPTTGSPAQPLLGKVALVTGGSRGLGRAMVRGFARAGADVVISSRKLDDCRALAEEVEREHGRRAFPHAAHV GHWDEVGALVEAAYAEFGRVDVLVNNAGLAPTYPGLDQVTEELFDKVIGVNLKGPFRLTALVATRMAAGAGGSIINISSS AAVRPMTTDLPYAAAKGGLNVLTAGFAQAFGPSVRVNTIMAGPFLTDMSRGWDMDALTGDLAHYPMRRAGDPDEVVGAAV YFASDASSYTTGAVLPVDGGRGVVSFGSA
Specific function: Catalyzes A Reversible Reduction Of 5-Ketoglutanate To Form D-Gluconate. Dependent On Nadp, Almost Inactive With NAD. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=34.9593495934959, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI19923817, Length=263, Percent_Identity=30.4182509505703, Blast_Score=121, Evalue=6e-28, Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=34.9593495934959, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=31.7073170731707, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=32.6530612244898, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=36.0655737704918, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=32.7935222672065, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI126723750, Length=249, Percent_Identity=30.5220883534137, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI59889578, Length=233, Percent_Identity=33.4763948497854, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI15277342, Length=255, Percent_Identity=33.7254901960784, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=35.5670103092784, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI40254986, Length=199, Percent_Identity=30.1507537688442, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI4758504, Length=252, Percent_Identity=32.5396825396825, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI209862901, Length=187, Percent_Identity=31.5508021390374, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI19923983, Length=187, Percent_Identity=31.5508021390374, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI224922801, Length=185, Percent_Identity=30.2702702702703, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI31542939, Length=260, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI4504505, Length=193, Percent_Identity=32.6424870466321, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI4503301, Length=258, Percent_Identity=27.5193798449612, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI83715985, Length=250, Percent_Identity=31.2, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI225579078, Length=211, Percent_Identity=28.436018957346, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI302344755, Length=103, Percent_Identity=36.8932038834951, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI20149619, Length=217, Percent_Identity=30.4147465437788, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=34.6938775510204, Blast_Score=127, Evalue=6e-31, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=34.2857142857143, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=35.8870967741936, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1789208, Length=246, Percent_Identity=34.9593495934959, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1789378, Length=247, Percent_Identity=34.0080971659919, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=33.6065573770492, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=31.4285714285714, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=35.0194552529183, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=32.1138211382114, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI2367365, Length=247, Percent_Identity=31.5789473684211, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=28.2352941176471, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI1789057, Length=266, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1787526, Length=192, Percent_Identity=27.0833333333333, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787820, Length=181, Percent_Identity=28.1767955801105, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=35.8024691358025, Blast_Score=130, Evalue=8e-31, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=32.0158102766798, Blast_Score=124, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17560676, Length=255, Percent_Identity=33.3333333333333, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=30.2788844621514, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI71994600, Length=257, Percent_Identity=28.7937743190661, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=31.5789473684211, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17536025, Length=258, Percent_Identity=28.6821705426357, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=32.9218106995885, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=28.125, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=28.735632183908, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=29.811320754717, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=29.9242424242424, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=29.9242424242424, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17561272, Length=270, Percent_Identity=30, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=29.3893129770992, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=28.735632183908, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=28.6792452830189, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=27.9245283018868, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=30.5660377358491, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17538182, Length=255, Percent_Identity=33.3333333333333, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17531453, Length=270, Percent_Identity=30.3703703703704, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562908, Length=268, Percent_Identity=29.4776119402985, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562990, Length=268, Percent_Identity=29.1044776119403, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71982365, Length=191, Percent_Identity=28.2722513089005, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17544670, Length=272, Percent_Identity=26.1029411764706, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17563726, Length=261, Percent_Identity=25.6704980842912, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17555612, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=28.1954887218045, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17565030, Length=275, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=26.6666666666667, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193203117, Length=158, Percent_Identity=30.379746835443, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193203115, Length=158, Percent_Identity=30.379746835443, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17568967, Length=198, Percent_Identity=31.3131313131313, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=27.8884462151394, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6322861, Length=192, Percent_Identity=29.6875, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323882, Length=204, Percent_Identity=26.9607843137255, Blast_Score=65, Evalue=8e-12, Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=34.412955465587, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=34.8, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=34.412955465587, Blast_Score=123, Evalue=1e-28, Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=32.258064516129, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24643142, Length=248, Percent_Identity=35.4838709677419, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI21355319, Length=253, Percent_Identity=30.4347826086957, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=34.8178137651822, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24644337, Length=254, Percent_Identity=29.5275590551181, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI281364892, Length=192, Percent_Identity=30.2083333333333, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24584744, Length=192, Percent_Identity=28.125, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574402, Length=192, Percent_Identity=28.125, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI21357673, Length=181, Percent_Identity=28.1767955801105, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI17737361, Length=250, Percent_Identity=30.8, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24584748, Length=211, Percent_Identity=26.5402843601896, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640492, Length=196, Percent_Identity=25.5102040816327, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI161076933, Length=211, Percent_Identity=26.5402843601896, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI18859837, Length=166, Percent_Identity=34.3373493975904, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27780; Mature: 27648
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTSSPASSPTTGSPAQPLLGKVALVTGGSRGLGRAMVRGFARAGADVVISSRKLDDCR CCCCCCCCCCCCCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCHHHH ALAEEVEREHGRRAFPHAAHVGHWDEVGALVEAAYAEFGRVDVLVNNAGLAPTYPGLDQV HHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHH TEELFDKVIGVNLKGPFRLTALVATRMAAGAGGSIINISSSAAVRPMTTDLPYAAAKGGL HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCH NVLTAGFAQAFGPSVRVNTIMAGPFLTDMSRGWDMDALTGDLAHYPMRRAGDPDEVVGAA HHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCHHHHHHHHHCCHHHCCCHHHHHHHH VYFASDASSYTTGAVLPVDGGRGVVSFGSA EEEECCCCCCCCCEEEECCCCCCEEECCCC >Mature Secondary Structure TSTSSPASSPTTGSPAQPLLGKVALVTGGSRGLGRAMVRGFARAGADVVISSRKLDDCR CCCCCCCCCCCCCCCCHHHHCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCHHHH ALAEEVEREHGRRAFPHAAHVGHWDEVGALVEAAYAEFGRVDVLVNNAGLAPTYPGLDQV HHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHH TEELFDKVIGVNLKGPFRLTALVATRMAAGAGGSIINISSSAAVRPMTTDLPYAAAKGGL HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHCCCH NVLTAGFAQAFGPSVRVNTIMAGPFLTDMSRGWDMDALTGDLAHYPMRRAGDPDEVVGAA HHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCCHHHHHHHHHCCHHHCCCHHHHHHHH VYFASDASSYTTGAVLPVDGGRGVVSFGSA EEEECCCCCCCCCEEEECCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]