| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718306
Identifier: 119718306
GI number: 119718306
Start: 4317128
End: 4318798
Strand: Reverse
Name: 119718306
Synonym: Noca_4087
Alternate gene names: NA
Gene position: 4318798-4317128 (Counterclockwise)
Preceding gene: 119718309
Following gene: 119718301
Centisome position: 86.62
GC content: 72.29
Gene sequence:
>1671_bases GTGATCGAACGGCACTACGTGAGCCTGGAGTCGGGCTCGATGCACTACCTGCGAGCCGGACGGGGCACGCCCGTCGTGGT GCTGCACGCCTCGCCCATGTCCTCCCGATCGATGCTCGACTGGGTCCGCGGGCTGGCCGGCGACTTCACGGTCTACGCGC CGGACACCGCCGGGTTCGGGCAGTCCGACCCACTTCCGTACGGCGGTGACGCGCCGGCGGTCTCTGACTATGGCCGCCGC GTGCTGGAGTTCGCCGACGCCGTCGGCCTGGACCGCTTCCTCCTGGGCGGCACCCACACCGGCGCCAAGGTGGCGCTGGA GGCCGCGGTCCAGGCGCCCGCGCGCGTCGCCCAGCTCGTGATGGACGGGCTCGGTCTGTACACCCCGGAGGAGATGAGCG ACCAGCTCGAGCACTACACACCTCCCATCGTGCCGGTGTGGCACGGTGGGCACCTGACCGAGGTCTGGCACCGGCTGCGC AACATGTGGACGTTCTGGCCTTGGTATCGGCAGGAGGCGGAGTGCCGGCTGGCCGACGCCATCCCCGACCTCGACATCCT GCAGCAGATGGCCTTCGACTCCCTCCGTGCGCGTCCCGACTGGGGACTGGCCTACCGCGCCGCGTTCCAGTACGACGGGC GACGAGCGCTCGCGCGCCTGTCCTCCCCGGCCGTGTTGATCGCCAAGGAGGCCGACCCACTGCACGAGCACCTCGAGCGG CTGGGCCTGGACACGCCGATGCTGCAGGTGCGGAGCGTCGCCAACGAGGACCACCTGAGCTCGGTCCTGGCCGCCTTCGA CCGTGCCTGCGGCCTCCCGGACGCGCCAGCGCCGCGGCCGGCCCGGCACGGGGGCGGGACCACCCGGCGCTACGTCCGGA CGTCGTCGGGCGAGGTCCATGTCCGCGTCGACGGCGACCCCGGTGCGCCTCCGCTGCTGTTCGTGCATGGGTCACCGGGA TCGGCGGACAGCTCCGACCCGCTCATCCGCGACCTGTCGCGCGACCATCTCGTGGTGGCACCCGACACGCTAGGCAACGG CTATTCCGAGCCGGCGCCCGGGACGGACCCCGGCATCGACGTGTTCGCGGACGCCGTCGCCGAGGTGCTCGCCCAGCTCG GACTCGGGCCGGTGACCGCCTACGGGAGCCACACGGGTGCCTGCATCGTCCTGGAGCTGGCCGTCCGCCGGCCGGACCTG GTCGCGACCGTGGTGGCAGACGGCCTCCCCGTCTTCGAAGAGGCGGAGCAGGCCGACCTGCTCGAGAACTACTTCGTCTC GCTCTCCCCGGAGCGCCACGGCGAGCACCTGCTGCGCGCCTGGCACACCATCCGTGACGTCCAGCTGTGGTGGCCCTGGT ACCGGCAGGACGCCGAGCACCGGCGCCCCACCGGGCCCTCCGACCCCGAGACGCTGCACCGGCTGGTCGTCGAGTTCATC AAGAGCGGGAACACCTACCGTGCGTCGTACGCGGCGGCGATCCGGTATCCCTCGCTCGACCGGCTCGGACAGGTGAGTGT TCCCACCGTCGCGTGCGCCGAGCCCACCGACATGCTGTTCGCCGGCAGCCGGGAGGCGAGTGCGCTCCCGGGCGTCCGGT TCGTGACGCTGGACGCTCGCGCGGGACGCGATGCGGCGTGGGTCGTGCGCGAGGCGGCCGACTCCGCCTGA
Upstream 100 bases:
>100_bases TCAAGAGTGACCCGCGGCGGGGCTTGCCGGGCGTCCGGCGCGGCAACATACTGTTCCGATACTAGAAACAACGTTTCGAC ATCGCATTGAGGAGCGCCTC
Downstream 100 bases:
>100_bases GGCGAGCCACCGCCGACACGACGGCGCCCGCCCCTCCGGGGAGGGACGGGCGCCGTCGGCTGCGGGCCGGGTGGCCAGGG CGTGGTCAGGCCGTGGGCCG
Product: alpha/beta fold family hydrolase/acetyltransferase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase/Acetyltransferase; Alpha/Beta Fold Family Hydrolase; Hydrolase; Hydrolase Alpha/Beta Fold Family
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MIERHYVSLESGSMHYLRAGRGTPVVVLHASPMSSRSMLDWVRGLAGDFTVYAPDTAGFGQSDPLPYGGDAPAVSDYGRR VLEFADAVGLDRFLLGGTHTGAKVALEAAVQAPARVAQLVMDGLGLYTPEEMSDQLEHYTPPIVPVWHGGHLTEVWHRLR NMWTFWPWYRQEAECRLADAIPDLDILQQMAFDSLRARPDWGLAYRAAFQYDGRRALARLSSPAVLIAKEADPLHEHLER LGLDTPMLQVRSVANEDHLSSVLAAFDRACGLPDAPAPRPARHGGGTTRRYVRTSSGEVHVRVDGDPGAPPLLFVHGSPG SADSSDPLIRDLSRDHLVVAPDTLGNGYSEPAPGTDPGIDVFADAVAEVLAQLGLGPVTAYGSHTGACIVLELAVRRPDL VATVVADGLPVFEEAEQADLLENYFVSLSPERHGEHLLRAWHTIRDVQLWWPWYRQDAEHRRPTGPSDPETLHRLVVEFI KSGNTYRASYAAAIRYPSLDRLGQVSVPTVACAEPTDMLFAGSREASALPGVRFVTLDARAGRDAAWVVREAADSA
Sequences:
>Translated_556_residues MIERHYVSLESGSMHYLRAGRGTPVVVLHASPMSSRSMLDWVRGLAGDFTVYAPDTAGFGQSDPLPYGGDAPAVSDYGRR VLEFADAVGLDRFLLGGTHTGAKVALEAAVQAPARVAQLVMDGLGLYTPEEMSDQLEHYTPPIVPVWHGGHLTEVWHRLR NMWTFWPWYRQEAECRLADAIPDLDILQQMAFDSLRARPDWGLAYRAAFQYDGRRALARLSSPAVLIAKEADPLHEHLER LGLDTPMLQVRSVANEDHLSSVLAAFDRACGLPDAPAPRPARHGGGTTRRYVRTSSGEVHVRVDGDPGAPPLLFVHGSPG SADSSDPLIRDLSRDHLVVAPDTLGNGYSEPAPGTDPGIDVFADAVAEVLAQLGLGPVTAYGSHTGACIVLELAVRRPDL VATVVADGLPVFEEAEQADLLENYFVSLSPERHGEHLLRAWHTIRDVQLWWPWYRQDAEHRRPTGPSDPETLHRLVVEFI KSGNTYRASYAAAIRYPSLDRLGQVSVPTVACAEPTDMLFAGSREASALPGVRFVTLDARAGRDAAWVVREAADSA >Mature_556_residues MIERHYVSLESGSMHYLRAGRGTPVVVLHASPMSSRSMLDWVRGLAGDFTVYAPDTAGFGQSDPLPYGGDAPAVSDYGRR VLEFADAVGLDRFLLGGTHTGAKVALEAAVQAPARVAQLVMDGLGLYTPEEMSDQLEHYTPPIVPVWHGGHLTEVWHRLR NMWTFWPWYRQEAECRLADAIPDLDILQQMAFDSLRARPDWGLAYRAAFQYDGRRALARLSSPAVLIAKEADPLHEHLER LGLDTPMLQVRSVANEDHLSSVLAAFDRACGLPDAPAPRPARHGGGTTRRYVRTSSGEVHVRVDGDPGAPPLLFVHGSPG SADSSDPLIRDLSRDHLVVAPDTLGNGYSEPAPGTDPGIDVFADAVAEVLAQLGLGPVTAYGSHTGACIVLELAVRRPDL VATVVADGLPVFEEAEQADLLENYFVSLSPERHGEHLLRAWHTIRDVQLWWPWYRQDAEHRRPTGPSDPETLHRLVVEFI KSGNTYRASYAAAIRYPSLDRLGQVSVPTVACAEPTDMLFAGSREASALPGVRFVTLDARAGRDAAWVVREAADSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60662; Mature: 60662
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIERHYVSLESGSMHYLRAGRGTPVVVLHASPMSSRSMLDWVRGLAGDFTVYAPDTAGFG CCCCEEEEECCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCC QSDPLPYGGDAPAVSDYGRRVLEFADAVGLDRFLLGGTHTGAKVALEAAVQAPARVAQLV CCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH MDGLGLYTPEEMSDQLEHYTPPIVPVWHGGHLTEVWHRLRNMWTFWPWYRQEAECRLADA HHHCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHC IPDLDILQQMAFDSLRARPDWGLAYRAAFQYDGRRALARLSSPAVLIAKEADPLHEHLER CCCHHHHHHHHHHHHCCCCCCCCEEEEEHHCCHHHHHHHCCCCEEEEEECCCHHHHHHHH LGLDTPMLQVRSVANEDHLSSVLAAFDRACGLPDAPAPRPARHGGGTTRRYVRTSSGEVH HCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE VRVDGDPGAPPLLFVHGSPGSADSSDPLIRDLSRDHLVVAPDTLGNGYSEPAPGTDPGID EEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHH VFADAVAEVLAQLGLGPVTAYGSHTGACIVLELAVRRPDLVATVVADGLPVFEEAEQADL HHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHH LENYFVSLSPERHGEHLLRAWHTIRDVQLWWPWYRQDAEHRRPTGPSDPETLHRLVVEFI HHHHHEECCCHHHHHHHHHHHHHHHHHHEECHHHHCCHHHCCCCCCCCHHHHHHHHHHHH KSGNTYRASYAAAIRYPSLDRLGQVSVPTVACAEPTDMLFAGSREASALPGVRFVTLDAR HCCCCEEEEHEEEEECCCHHHCCCCCCCEEECCCCCHHEEECCCCCCCCCCEEEEEEECC AGRDAAWVVREAADSA CCCCHHHHHHHHCCCC >Mature Secondary Structure MIERHYVSLESGSMHYLRAGRGTPVVVLHASPMSSRSMLDWVRGLAGDFTVYAPDTAGFG CCCCEEEEECCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCC QSDPLPYGGDAPAVSDYGRRVLEFADAVGLDRFLLGGTHTGAKVALEAAVQAPARVAQLV CCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH MDGLGLYTPEEMSDQLEHYTPPIVPVWHGGHLTEVWHRLRNMWTFWPWYRQEAECRLADA HHHCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHCCCCHHHHHC IPDLDILQQMAFDSLRARPDWGLAYRAAFQYDGRRALARLSSPAVLIAKEADPLHEHLER CCCHHHHHHHHHHHHCCCCCCCCEEEEEHHCCHHHHHHHCCCCEEEEEECCCHHHHHHHH LGLDTPMLQVRSVANEDHLSSVLAAFDRACGLPDAPAPRPARHGGGTTRRYVRTSSGEVH HCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEE VRVDGDPGAPPLLFVHGSPGSADSSDPLIRDLSRDHLVVAPDTLGNGYSEPAPGTDPGID EEECCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHH VFADAVAEVLAQLGLGPVTAYGSHTGACIVLELAVRRPDLVATVVADGLPVFEEAEQADL HHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHH LENYFVSLSPERHGEHLLRAWHTIRDVQLWWPWYRQDAEHRRPTGPSDPETLHRLVVEFI HHHHHEECCCHHHHHHHHHHHHHHHHHHEECHHHHCCHHHCCCCCCCCHHHHHHHHHHHH KSGNTYRASYAAAIRYPSLDRLGQVSVPTVACAEPTDMLFAGSREASALPGVRFVTLDAR HCCCCEEEEHEEEEECCCHHHCCCCCCCEEECCCCCHHEEECCCCCCCCCCEEEEEEECC AGRDAAWVVREAADSA CCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA