| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718300
Identifier: 119718300
GI number: 119718300
Start: 4309303
End: 4310211
Strand: Reverse
Name: 119718300
Synonym: Noca_4081
Alternate gene names: NA
Gene position: 4310211-4309303 (Counterclockwise)
Preceding gene: 119718301
Following gene: 119718298
Centisome position: 86.45
GC content: 72.06
Gene sequence:
>909_bases ATGGGATCGTCCATCCCGGCACCCGGGTCCGTCCCCGGGTCGGCGCCCACTACGGCGCGTGGCCCGGCGGACGGCCACCG AGAGCCAGGAGAGAGCGTGACGGGACTGCGCAGGGAGTACGTCGACGGGCCGGAGGGGCAGATCCATGTCCGCCGGGCGG GTGCCGCAGGGATCGGGGAGCGGCCCCTGCTGTGCCTCCACCTGAGTCCGGGCTCCGGACGCATGTACGAGGAGCTGCTC GTCGAGATGGCGACGGACCGGTTCGCGATCGCCCCCGACACGCCCGGCTTCGGAGCCAGCGACCCCTCTGCGGCGCCCCC GACCATCGCCACCTTCGCGCGGTCGATGCTGGCCGTGCTCGACCACTACAGGATCGATGAGGTGGACGTCCTCGGCTACC ACACCGGGAGCAAGATCGCGGTCGAGCTGGCGCTCGTCGCACCCACGCGGGTGCACAGCCTCGTCCTGGTCTCCGCGCCG GTCTACACCGAGGAGGAGCTCGCGCAGCAGGCGGCGGCCCTCGCCGTGCCGCGCACCCTCGAGCCGGACGGCTCGCACCT GGTCCGGCAGTTCAGGGAGCTGGTGCGGTGGAGCCCCCGGGACACACCGCTGTCGCTGATCCAACGCGAGTTCGGCGAGC AGCAGCGGGGAGGCTCCCGCGCCCACTGGGGCTACCTGGCCGCGTTCGCCTACCAGCACGCCGAGAAGCTGCCGTGCGTG GAGCAACCGGTCCTCCTGCTGTGCCCTCAGGACGACCTCGAGGGGCCGACGCTGCGGGCCGAGAGGCTCCTGAGGCGCGG TCGCTTCCTCCGGTTGCCCGGCTGGAGCCACCAGATGATGATCACCCGGACCGCTGAGGTTGCGGGACTGATCCGCGAGC ATGTCGCGGACCCGGACCGACTCAGCTGA
Upstream 100 bases:
>100_bases CAAGGACCTGGTGGGCTACGAGCCCTCCGGGCTCCTGTGGCTGAACACCGTGCTCGACGTCAAGTAGCGCGAGCACGACC AGCATGGGCCAGGTGTCGGG
Downstream 100 bases:
>100_bases GACGCCGCAGGCTGGGCCCTGTGCTGAGGGCGACCAGCACCAGCAGTACGCCCGAGACCAGCAGTGCGGTGGTCTCGCCC CGGGTCGCGATCCCGAGCGT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase/Acetyltransferase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MGSSIPAPGSVPGSAPTTARGPADGHREPGESVTGLRREYVDGPEGQIHVRRAGAAGIGERPLLCLHLSPGSGRMYEELL VEMATDRFAIAPDTPGFGASDPSAAPPTIATFARSMLAVLDHYRIDEVDVLGYHTGSKIAVELALVAPTRVHSLVLVSAP VYTEEELAQQAAALAVPRTLEPDGSHLVRQFRELVRWSPRDTPLSLIQREFGEQQRGGSRAHWGYLAAFAYQHAEKLPCV EQPVLLLCPQDDLEGPTLRAERLLRRGRFLRLPGWSHQMMITRTAEVAGLIREHVADPDRLS
Sequences:
>Translated_302_residues MGSSIPAPGSVPGSAPTTARGPADGHREPGESVTGLRREYVDGPEGQIHVRRAGAAGIGERPLLCLHLSPGSGRMYEELL VEMATDRFAIAPDTPGFGASDPSAAPPTIATFARSMLAVLDHYRIDEVDVLGYHTGSKIAVELALVAPTRVHSLVLVSAP VYTEEELAQQAAALAVPRTLEPDGSHLVRQFRELVRWSPRDTPLSLIQREFGEQQRGGSRAHWGYLAAFAYQHAEKLPCV EQPVLLLCPQDDLEGPTLRAERLLRRGRFLRLPGWSHQMMITRTAEVAGLIREHVADPDRLS >Mature_301_residues GSSIPAPGSVPGSAPTTARGPADGHREPGESVTGLRREYVDGPEGQIHVRRAGAAGIGERPLLCLHLSPGSGRMYEELLV EMATDRFAIAPDTPGFGASDPSAAPPTIATFARSMLAVLDHYRIDEVDVLGYHTGSKIAVELALVAPTRVHSLVLVSAPV YTEEELAQQAAALAVPRTLEPDGSHLVRQFRELVRWSPRDTPLSLIQREFGEQQRGGSRAHWGYLAAFAYQHAEKLPCVE QPVLLLCPQDDLEGPTLRAERLLRRGRFLRLPGWSHQMMITRTAEVAGLIREHVADPDRLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32845; Mature: 32714
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSIPAPGSVPGSAPTTARGPADGHREPGESVTGLRREYVDGPEGQIHVRRAGAAGIGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC RPLLCLHLSPGSGRMYEELLVEMATDRFAIAPDTPGFGASDPSAAPPTIATFARSMLAVL CCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DHYRIDEVDVLGYHTGSKIAVELALVAPTRVHSLVLVSAPVYTEEELAQQAAALAVPRTL HHCCCCCEEEEEECCCCEEEEEEEEECCHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCC EPDGSHLVRQFRELVRWSPRDTPLSLIQREFGEQQRGGSRAHWGYLAAFAYQHAEKLPCV CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC EQPVLLLCPQDDLEGPTLRAERLLRRGRFLRLPGWSHQMMITRTAEVAGLIREHVADPDR CCCEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCC LS CC >Mature Secondary Structure GSSIPAPGSVPGSAPTTARGPADGHREPGESVTGLRREYVDGPEGQIHVRRAGAAGIGE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC RPLLCLHLSPGSGRMYEELLVEMATDRFAIAPDTPGFGASDPSAAPPTIATFARSMLAVL CCEEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH DHYRIDEVDVLGYHTGSKIAVELALVAPTRVHSLVLVSAPVYTEEELAQQAAALAVPRTL HHCCCCCEEEEEECCCCEEEEEEEEECCHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCC EPDGSHLVRQFRELVRWSPRDTPLSLIQREFGEQQRGGSRAHWGYLAAFAYQHAEKLPCV CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC EQPVLLLCPQDDLEGPTLRAERLLRRGRFLRLPGWSHQMMITRTAEVAGLIREHVADPDR CCCEEEEECCCCCCCCHHHHHHHHHCCCEEECCCCCCEEEEEHHHHHHHHHHHHCCCCCC LS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA