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The map label for this gene is ccmL [H]

Identifier: 119718255

GI number: 119718255

Start: 4260568

End: 4260858

Strand: Reverse

Name: ccmL [H]

Synonym: Noca_4036

Alternate gene names: 119718255

Gene position: 4260858-4260568 (Counterclockwise)

Preceding gene: 119718256

Following gene: 119718254

Centisome position: 85.46

GC content: 68.04

Gene sequence:

>291_bases
ATGCGCATCGCACGAGTGGTTGGCTCGGCGGTCTCGACCGTCAAGGACCCGAGCCTGGTCGGGCACAAGCTCCTCCTGGT
CCAGGAGACGGACGCAAGCAGCGCCGTCACCGGCTCGGTCTTCGTTGCGATCGATGTCGTCGGCGCTGGCTCGGGGGAGC
TCGTGCTCGTCTCCGAAGGCAGTGCCGCGCGGCACAGCGCGACGACGACGGGGCAGCCCGTGGACGCGGTGATCATGGGG
ATCTTGGACTCGCTGGAGGTGGACGGCGCCGTCACCTTCAGGAAGAGCTGA

Upstream 100 bases:

>100_bases
ATCGCCTACTTCGGCCTCTACAGCCGACACCACATCGTGGCGTCGGCTCCCGAGGAGGAGTTCGCCCTGATCGAGTCCTC
CGAGTCCGAGCTGCACTGAC

Downstream 100 bases:

>100_bases
CGCCCGATGGCAGGCGTCCAGCGAGAGGTATTGAGTGTCGGGATCGATGTCGGGACCACCACCACCCAGGTGGTGTTCTC
CCGGCTGATCCTGCACGACG

Product: ethanolamine utilization protein EutN/carboxysome structural protein Ccml

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRIARVVGSAVSTVKDPSLVGHKLLLVQETDASSAVTGSVFVAIDVVGAGSGELVLVSEGSAARHSATTTGQPVDAVIMG
ILDSLEVDGAVTFRKS

Sequences:

>Translated_96_residues
MRIARVVGSAVSTVKDPSLVGHKLLLVQETDASSAVTGSVFVAIDVVGAGSGELVLVSEGSAARHSATTTGQPVDAVIMG
ILDSLEVDGAVTFRKS
>Mature_96_residues
MRIARVVGSAVSTVKDPSLVGHKLLLVQETDASSAVTGSVFVAIDVVGAGSGELVLVSEGSAARHSATTTGQPVDAVIMG
ILDSLEVDGAVTFRKS

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4576

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli and S.typhimurium CchB [H]

Homologues:

Organism=Escherichia coli, GI1788798, Length=95, Percent_Identity=41.0526315789474, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004992
- ProDom:   PD012510 [H]

Pfam domain/function: PF03319 EutN_CcmL [H]

EC number: NA

Molecular weight: Translated: 9664; Mature: 9664

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIARVVGSAVSTVKDPSLVGHKLLLVQETDASSAVTGSVFVAIDVVGAGSGELVLVSEG
CCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEECC
SAARHSATTTGQPVDAVIMGILDSLEVDGAVTFRKS
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure
MRIARVVGSAVSTVKDPSLVGHKLLLVQETDASSAVTGSVFVAIDVVGAGSGELVLVSEG
CCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCEEEEECC
SAARHSATTTGQPVDAVIMGILDSLEVDGAVTFRKS
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491708 [H]