Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119718233

Identifier: 119718233

GI number: 119718233

Start: 4236331

End: 4238016

Strand: Reverse

Name: 119718233

Synonym: Noca_4014

Alternate gene names: NA

Gene position: 4238016-4236331 (Counterclockwise)

Preceding gene: 119718234

Following gene: 119718232

Centisome position: 85.0

GC content: 74.08

Gene sequence:

>1686_bases
ATGAAGTCGACCAGAGGCACGTGGAAACGCCTCGCCGCCCCGATCTCGGCCGCAGCACTCGCCGGCGTCGTTCTGCCGAT
GTCGGCGAGTGCTCCCGCGGCCGGCCAGGACGACACCGCCAAGCCGGCGTTCAGCGGGTTCAGCTCCTCGGCGTGGGCGG
CGCCGGTGAAGGTCGAGATCTACGAGCCGACCATCCCCATCCCGGCCAACCCGCAGATGGAGCTCGAGATGGGCTACTCC
AAGGTGGAGGCCGACTCGGGCAGCTCGCTGGGACGCGCCAGCTGGCTGTGGCCCGGCGACTCGATCGGCGAGGGCGCGAA
GACCGTCATCGAGAACCTCGGTCTGCCCGAGCAGCTCTCGGGGCCGCTGGCCGCCCAGGGCTACCCCGTCCAGGTCAACG
CCTCGCAGCCCTCCGGGGAGGCGAAGGCGTCCGACGAGCCGTTCCCCGGCACGGTCATGCGCACCAGTGCCGGCGCGAAG
ACCACCGTCGCGCAGGTCGGGTTCTCCCCCGACAACGAGGTCCGGGACGGATCCGGCGACGGAGGAGACGGCGGCGACGG
AGGCGGTGCGCCCGGACTCCCGGGTGTCCCCGGCCTGCCTCCGATCCCGGGCCTGCCCGGCAGCGCCGGCGGCGGCGACC
TCCTTCAGCAGTTCGGTCAGGCGATCACCGGCTCGGCCGGGCTGGCCGGCGCCGCCGACGACCCCCAGGACGACCCGCCG
GGTGGCTCCGGCGCGCCCGGCCTGCCGCCCCAGGTCGCCGCTCTCGTCGACTTCGAGGGCTACGCCTCCACCAGCAAGAA
CGTCGTGACCGACTCGAAGGTCGTGGCCTCGTCCCGCTCCGCGCTGGGCGACGTCTACCTGCTCGGCGGCACCGTCGTGC
TCAACGGCGTCGTGGTGACCAGCACCAGCTCCAGCGACGGCGCCAAGGGCAGCTCCGGCGGCAAGGCGACGCTGGGCGGC
CTGACGATCGCGGGCCAGGAGTTCTCCTTCGGGCCCGGTGGGGCCGAGGGGGCCGGCCAGCACGCCGACGTACCGGCCGT
TCCCGACCAGGCGACCGCGGCCCTGGACCAGCTCGGTATCAAGCTGATCCTGCCGAAGCCCGACCTGGCGAAGCAGGGCG
ACCAGGCCAGCAGCACCATGGCGGGACTCGTCGTCGAGATCGACACCGCCAAGCTGCGCGGTCAGCTCGACGCGCTCCCG
ATCGACGACATCGTCAACGCCTTCCCGAACGACCCGCCCGACCTGAAGAAGGCCCTGCAGACCCTGGTCGGGCTCTCGCC
GCGGATCGTGGTGACCCTCGGCAACGCGGGCAGCGAGGTCGACACGGTGCAGGGCATCGAGCTGCCCACCGGCGACCTCC
CCGACAACGACCCGGCCGGGTCCGGGGACACCGGCGGTCCGGCCGCGGCCGGCGGGCCGACGGCCGCCGGCGGCTCCCCG
TCGGCAATCGGACCCGGCCCGACGGGCAGTGCGCCGTCGGCGGCCGGTGACCTCGGGGACGCCCAGCTCACCGGATCGGG
GCTCCCCCCGCTCTACTCCATCCCCGGCGCCATCCTCGTCGCGAGCCTGGCCCTGGCCGCCGTCGGCGGCACCTGGCTCC
GCCGGATCGGCGCGATCGCGCTCGGTGGCGCCGGGTCCTGCACGCACGGCCTCGACAGCGGCCTGCCCGACCTCCGAAAG
GCCTGA

Upstream 100 bases:

>100_bases
CCGACTACGCGGCGGTGATGACCGGCGGCCGGATCGTGGCCACCGGCGAGCCCGCCGAGATCCTCGCCACCATGTCCGAC
GTCATCCTCGGAGGTGCCGC

Downstream 100 bases:

>100_bases
CCATGACCACCATGACACCAGGGATGACGCCCGCCGCGGAGCAGCCCGCCCCGGCCGCGCCGGCGCAGCGCCTCTCGATC
GGCCTGCCCCGGGCCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MKSTRGTWKRLAAPISAAALAGVVLPMSASAPAAGQDDTAKPAFSGFSSSAWAAPVKVEIYEPTIPIPANPQMELEMGYS
KVEADSGSSLGRASWLWPGDSIGEGAKTVIENLGLPEQLSGPLAAQGYPVQVNASQPSGEAKASDEPFPGTVMRTSAGAK
TTVAQVGFSPDNEVRDGSGDGGDGGDGGGAPGLPGVPGLPPIPGLPGSAGGGDLLQQFGQAITGSAGLAGAADDPQDDPP
GGSGAPGLPPQVAALVDFEGYASTSKNVVTDSKVVASSRSALGDVYLLGGTVVLNGVVVTSTSSSDGAKGSSGGKATLGG
LTIAGQEFSFGPGGAEGAGQHADVPAVPDQATAALDQLGIKLILPKPDLAKQGDQASSTMAGLVVEIDTAKLRGQLDALP
IDDIVNAFPNDPPDLKKALQTLVGLSPRIVVTLGNAGSEVDTVQGIELPTGDLPDNDPAGSGDTGGPAAAGGPTAAGGSP
SAIGPGPTGSAPSAAGDLGDAQLTGSGLPPLYSIPGAILVASLALAAVGGTWLRRIGAIALGGAGSCTHGLDSGLPDLRK
A

Sequences:

>Translated_561_residues
MKSTRGTWKRLAAPISAAALAGVVLPMSASAPAAGQDDTAKPAFSGFSSSAWAAPVKVEIYEPTIPIPANPQMELEMGYS
KVEADSGSSLGRASWLWPGDSIGEGAKTVIENLGLPEQLSGPLAAQGYPVQVNASQPSGEAKASDEPFPGTVMRTSAGAK
TTVAQVGFSPDNEVRDGSGDGGDGGDGGGAPGLPGVPGLPPIPGLPGSAGGGDLLQQFGQAITGSAGLAGAADDPQDDPP
GGSGAPGLPPQVAALVDFEGYASTSKNVVTDSKVVASSRSALGDVYLLGGTVVLNGVVVTSTSSSDGAKGSSGGKATLGG
LTIAGQEFSFGPGGAEGAGQHADVPAVPDQATAALDQLGIKLILPKPDLAKQGDQASSTMAGLVVEIDTAKLRGQLDALP
IDDIVNAFPNDPPDLKKALQTLVGLSPRIVVTLGNAGSEVDTVQGIELPTGDLPDNDPAGSGDTGGPAAAGGPTAAGGSP
SAIGPGPTGSAPSAAGDLGDAQLTGSGLPPLYSIPGAILVASLALAAVGGTWLRRIGAIALGGAGSCTHGLDSGLPDLRK
A
>Mature_561_residues
MKSTRGTWKRLAAPISAAALAGVVLPMSASAPAAGQDDTAKPAFSGFSSSAWAAPVKVEIYEPTIPIPANPQMELEMGYS
KVEADSGSSLGRASWLWPGDSIGEGAKTVIENLGLPEQLSGPLAAQGYPVQVNASQPSGEAKASDEPFPGTVMRTSAGAK
TTVAQVGFSPDNEVRDGSGDGGDGGDGGGAPGLPGVPGLPPIPGLPGSAGGGDLLQQFGQAITGSAGLAGAADDPQDDPP
GGSGAPGLPPQVAALVDFEGYASTSKNVVTDSKVVASSRSALGDVYLLGGTVVLNGVVVTSTSSSDGAKGSSGGKATLGG
LTIAGQEFSFGPGGAEGAGQHADVPAVPDQATAALDQLGIKLILPKPDLAKQGDQASSTMAGLVVEIDTAKLRGQLDALP
IDDIVNAFPNDPPDLKKALQTLVGLSPRIVVTLGNAGSEVDTVQGIELPTGDLPDNDPAGSGDTGGPAAAGGPTAAGGSP
SAIGPGPTGSAPSAAGDLGDAQLTGSGLPPLYSIPGAILVASLALAAVGGTWLRRIGAIALGGAGSCTHGLDSGLPDLRK
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54557; Mature: 54557

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTRGTWKRLAAPISAAALAGVVLPMSASAPAAGQDDTAKPAFSGFSSSAWAAPVKVEI
CCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEE
YEPTIPIPANPQMELEMGYSKVEADSGSSLGRASWLWPGDSIGEGAKTVIENLGLPEQLS
ECCCCCCCCCCCEEEECCCHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHC
GPLAAQGYPVQVNASQPSGEAKASDEPFPGTVMRTSAGAKTTVAQVGFSPDNEVRDGSGD
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC
GGDGGDGGGAPGLPGVPGLPPIPGLPGSAGGGDLLQQFGQAITGSAGLAGAADDPQDDPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GGSGAPGLPPQVAALVDFEGYASTSKNVVTDSKVVASSRSALGDVYLLGGTVVLNGVVVT
CCCCCCCCCHHHEEEEECCCCCCCCCCEECCHHHHHHHHHHHCEEEEECCEEEEEEEEEE
STSSSDGAKGSSGGKATLGGLTIAGQEFSFGPGGAEGAGQHADVPAVPDQATAALDQLGI
ECCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCE
KLILPKPDLAKQGDQASSTMAGLVVEIDTAKLRGQLDALPIDDIVNAFPNDPPDLKKALQ
EEEECCCCHHHCCCHHHHHHEEEEEEEECHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHH
TLVGLSPRIVVTLGNAGSEVDTVQGIELPTGDLPDNDPAGSGDTGGPAAAGGPTAAGGSP
HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAIGPGPTGSAPSAAGDLGDAQLTGSGLPPLYSIPGAILVASLALAAVGGTWLRRIGAIA
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCEE
LGGAGSCTHGLDSGLPDLRKA
ECCCCCCCCCHHCCCCHHHCC
>Mature Secondary Structure
MKSTRGTWKRLAAPISAAALAGVVLPMSASAPAAGQDDTAKPAFSGFSSSAWAAPVKVEI
CCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEE
YEPTIPIPANPQMELEMGYSKVEADSGSSLGRASWLWPGDSIGEGAKTVIENLGLPEQLS
ECCCCCCCCCCCEEEECCCHHCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCHHHC
GPLAAQGYPVQVNASQPSGEAKASDEPFPGTVMRTSAGAKTTVAQVGFSPDNEVRDGSGD
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC
GGDGGDGGGAPGLPGVPGLPPIPGLPGSAGGGDLLQQFGQAITGSAGLAGAADDPQDDPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GGSGAPGLPPQVAALVDFEGYASTSKNVVTDSKVVASSRSALGDVYLLGGTVVLNGVVVT
CCCCCCCCCHHHEEEEECCCCCCCCCCEECCHHHHHHHHHHHCEEEEECCEEEEEEEEEE
STSSSDGAKGSSGGKATLGGLTIAGQEFSFGPGGAEGAGQHADVPAVPDQATAALDQLGI
ECCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCE
KLILPKPDLAKQGDQASSTMAGLVVEIDTAKLRGQLDALPIDDIVNAFPNDPPDLKKALQ
EEEECCCCHHHCCCHHHHHHEEEEEEEECHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHH
TLVGLSPRIVVTLGNAGSEVDTVQGIELPTGDLPDNDPAGSGDTGGPAAAGGPTAAGGSP
HHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAIGPGPTGSAPSAAGDLGDAQLTGSGLPPLYSIPGAILVASLALAAVGGTWLRRIGAIA
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCEE
LGGAGSCTHGLDSGLPDLRKA
ECCCCCCCCCHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA