| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718232
Identifier: 119718232
GI number: 119718232
Start: 4235741
End: 4236328
Strand: Reverse
Name: 119718232
Synonym: Noca_4013
Alternate gene names: NA
Gene position: 4236328-4235741 (Counterclockwise)
Preceding gene: 119718233
Following gene: 119718229
Centisome position: 84.97
GC content: 73.98
Gene sequence:
>588_bases ATGACCACCATGACACCAGGGATGACGCCCGCCGCGGAGCAGCCCGCCCCGGCCGCGCCGGCGCAGCGCCTCTCGATCGG CCTGCCCCGGGCCGGCAGCCGCTCCGGCTCCGGCGCCGCGCCGCTGAAGGACAACCACTACCAGCTGCTCCAGCTGATCC TGTTCTGGGCGGGCGCGGTCCTGCTGCCGCTCGGCCTGGTCGTGATCGTGCTCGGCTGGTACGGCGCCGCGCACACGCCG TACCAGTACGACCAGCTGTCCTACGTCGTCTCCGGCGGCCTGCTCGGCCTGGGCCTCACCTTCACCGGCGGGTTCTTGTA CTTCGGCGCCTGGCTGGCGCGGATCGCGGCCGACGGCAAGGAGTCCTCGCGCCGCCTCGCCGACACCCTGCTCGTGCTCG CCGACGTGACCTCGCGCTCGGCGAACCAGCGCGACGACGGGGTGGACGTCTCCGCGCTGCCGGTGACCGCCGGCGACGGC ACCACCGTGCACCGGCGGGACTGCGCGCTGATCGCCCACCGCACCGACCTGCACCCCGTCGGGGAGAACAACGGGCACCT GACCACCTGCCGGGTCTGCCGCCCCTGA
Upstream 100 bases:
>100_bases GCACCTGGCTCCGCCGGATCGGCGCGATCGCGCTCGGTGGCGCCGGGTCCTGCACGCACGGCCTCGACAGCGGCCTGCCC GACCTCCGAAAGGCCTGACC
Downstream 100 bases:
>100_bases CCCGCCGGGGCTGGTCGACTCGGCGCATCTTGCCCGCTGGGGCTGGTCGACTCGGCGCATCCTGCCCGCCCCTTCACAGA GCGGGCGACGAGCCGGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTTMTPGMTPAAEQPAPAAPAQRLSIGLPRAGSRSGSGAAPLKDNHYQLLQLILFWAGAVLLPLGLVVIVLGWYGAAHTP YQYDQLSYVVSGGLLGLGLTFTGGFLYFGAWLARIAADGKESSRRLADTLLVLADVTSRSANQRDDGVDVSALPVTAGDG TTVHRRDCALIAHRTDLHPVGENNGHLTTCRVCRP
Sequences:
>Translated_195_residues MTTMTPGMTPAAEQPAPAAPAQRLSIGLPRAGSRSGSGAAPLKDNHYQLLQLILFWAGAVLLPLGLVVIVLGWYGAAHTP YQYDQLSYVVSGGLLGLGLTFTGGFLYFGAWLARIAADGKESSRRLADTLLVLADVTSRSANQRDDGVDVSALPVTAGDG TTVHRRDCALIAHRTDLHPVGENNGHLTTCRVCRP >Mature_194_residues TTMTPGMTPAAEQPAPAAPAQRLSIGLPRAGSRSGSGAAPLKDNHYQLLQLILFWAGAVLLPLGLVVIVLGWYGAAHTPY QYDQLSYVVSGGLLGLGLTFTGGFLYFGAWLARIAADGKESSRRLADTLLVLADVTSRSANQRDDGVDVSALPVTAGDGT TVHRRDCALIAHRTDLHPVGENNGHLTTCRVCRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20574; Mature: 20443
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMTPGMTPAAEQPAPAAPAQRLSIGLPRAGSRSGSGAAPLKDNHYQLLQLILFWAGAV CCCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLPLGLVVIVLGWYGAAHTPYQYDQLSYVVSGGLLGLGLTFTGGFLYFGAWLARIAADGK HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHCCCC ESSRRLADTLLVLADVTSRSANQRDDGVDVSALPVTAGDGTTVHRRDCALIAHRTDLHPV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCC GENNGHLTTCRVCRP CCCCCCEEEEEECCC >Mature Secondary Structure TTMTPGMTPAAEQPAPAAPAQRLSIGLPRAGSRSGSGAAPLKDNHYQLLQLILFWAGAV CCCCCCCCCCCCCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH LLPLGLVVIVLGWYGAAHTPYQYDQLSYVVSGGLLGLGLTFTGGFLYFGAWLARIAADGK HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHCCCC ESSRRLADTLLVLADVTSRSANQRDDGVDVSALPVTAGDGTTVHRRDCALIAHRTDLHPV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEEECCCCCCC GENNGHLTTCRVCRP CCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA