| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718212
Identifier: 119718212
GI number: 119718212
Start: 4213095
End: 4213616
Strand: Reverse
Name: 119718212
Synonym: Noca_3993
Alternate gene names: NA
Gene position: 4213616-4213095 (Counterclockwise)
Preceding gene: 119718217
Following gene: 119718210
Centisome position: 84.51
GC content: 72.03
Gene sequence:
>522_bases ATGGCGGACCTGACCATGAGCCAGACGTACCCTCTCGCGACCTCGCGCCAACCCCGCGGCGTACGACGGGTACTGCTCGA GACCGGCTACCACCTCTCTGCCTTCCCGATCGCGCTCGTGGGGTTCGTGGTGGTGGTCACCGACCTGGCCCTCGGGGTCG GGCGCTCGGTCATCATCGGCGGCGTCCTGCTGCTCTGGGTCGGCGTGATGGTGGCGCGCGGCTTCGCCCGGTTCGAGCGG CTGCTGATGCGGGAGCTGCTCGGCCGCTGCGCGCCCACCCCGAGGTACCTGTGCGGGCGCGTCGGGGACGGGTTCTGGCG CCGGGCGCTCACGCCGCTGCGCGACCCGCAGTCCTGGCTCGACGTCGTGTGGTCGCTGGTCGCACTGGTGACCGGCAACT TCGCGTTCTCGCCGGGCGTGGCTCCAGGGTCACCTCAGCTGCCCCACCAGTCACACCTGGCGGCCGGAACCCGCACGACA CGCCGTGGCCCCTCGGCGTGTCCTGCGGGTTTCGGCTGCTGA
Upstream 100 bases:
>100_bases TTGAGCCTCCACAGGCCGCCGCCGCTGTCGGGTTGGCCCGACAGCGGATGTCGGGCTGGCAGGATCGTGCGCGAGCCCGC ATGTTCCTAGCGTTTCTCCC
Downstream 100 bases:
>100_bases CAGCCGAACCCCCCAGCGCGCCGGTCAGACCGGGAACTCGACCCCCACCTGGGCACGCAGGTCGTCCATCTGCCGCAGCA GCGCGAGGGTCTGCTCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Histidine Kinase
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MADLTMSQTYPLATSRQPRGVRRVLLETGYHLSAFPIALVGFVVVVTDLALGVGRSVIIGGVLLLWVGVMVARGFARFER LLMRELLGRCAPTPRYLCGRVGDGFWRRALTPLRDPQSWLDVVWSLVALVTGNFAFSPGVAPGSPQLPHQSHLAAGTRTT RRGPSACPAGFGC
Sequences:
>Translated_173_residues MADLTMSQTYPLATSRQPRGVRRVLLETGYHLSAFPIALVGFVVVVTDLALGVGRSVIIGGVLLLWVGVMVARGFARFER LLMRELLGRCAPTPRYLCGRVGDGFWRRALTPLRDPQSWLDVVWSLVALVTGNFAFSPGVAPGSPQLPHQSHLAAGTRTT RRGPSACPAGFGC >Mature_172_residues ADLTMSQTYPLATSRQPRGVRRVLLETGYHLSAFPIALVGFVVVVTDLALGVGRSVIIGGVLLLWVGVMVARGFARFERL LMRELLGRCAPTPRYLCGRVGDGFWRRALTPLRDPQSWLDVVWSLVALVTGNFAFSPGVAPGSPQLPHQSHLAAGTRTTR RGPSACPAGFGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18657; Mature: 18526
Theoretical pI: Translated: 11.62; Mature: 11.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLTMSQTYPLATSRQPRGVRRVLLETGYHLSAFPIALVGFVVVVTDLALGVGRSVIIG CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GVLLLWVGVMVARGFARFERLLMRELLGRCAPTPRYLCGRVGDGFWRRALTPLRDPQSWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCCCHHHHH DVVWSLVALVTGNFAFSPGVAPGSPQLPHQSHLAAGTRTTRRGPSACPAGFGC HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADLTMSQTYPLATSRQPRGVRRVLLETGYHLSAFPIALVGFVVVVTDLALGVGRSVIIG CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GVLLLWVGVMVARGFARFERLLMRELLGRCAPTPRYLCGRVGDGFWRRALTPLRDPQSWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHCCCCCCHHHHH DVVWSLVALVTGNFAFSPGVAPGSPQLPHQSHLAAGTRTTRRGPSACPAGFGC HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA