| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119718196
Identifier: 119718196
GI number: 119718196
Start: 4196471
End: 4197091
Strand: Reverse
Name: 119718196
Synonym: Noca_3977
Alternate gene names: NA
Gene position: 4197091-4196471 (Counterclockwise)
Preceding gene: 119718197
Following gene: 119718195
Centisome position: 84.18
GC content: 74.24
Gene sequence:
>621_bases ATGAGCGACGAGCTGCGCGACCGGCTGCGGGCGGCCGACCCGGCCTCCTCCCTGCCGCCGGCCGACCCCGACGGGACGGC CCGACTCCTGGAGGACGTCATGAGCACCGAGCTCACCAGCGAGAACCGGGAGACCGGCACCCGCGACCGCGGCCCGCTCA CCTGGCTGGTGGCCGCCGCGGCGGTGCTGATCATCGCGGGCATCGGCCTGTTCGGGGTGCTCAACCACGACGACGACCCG ATGGCCCCGCCGACCGCGGTCGACGACCAGACGGTCACCGAGCTGACCGCGCCGAGCGGGGCGGCGTACGCCGCGAAGTG CATGGTGCCCAGCGCCGACCTCATCGGCCAGCAGACCGTGGCCTTCGCGGGCACGGTCACGGCGATCGCCGACGGCATGG TCACGCTCGCCGTCGGCCACTGGTACACCGGCGACCCGACCGACCTGGTGCGGGTGCAGGCGCCGCCCGCCGACCTGCAG CAGCTGATTGGCGCGGTGAGCTTCGAGTCCGGCGGGCGGTACCTCGTCTCCGCGACTGACGGCCGGGTGACCGTGTGCGG CATGAGTGCCCCCTGGTCCGCGGACCTCGCGGCGCGGTACGACGAGGCGTTCGGCAGCTGA
Upstream 100 bases:
>100_bases CGAGCGTCCGGCTGCACCGCGCCCGCACGAAGCTGGCCGACCAGCTCGGTAAGACCGGCGCGGGTGCCGGACATGAGGAG TCGAGAGAGGGGAGAAGGTC
Downstream 100 bases:
>100_bases CCGGGTCGGCCCCGGAGGGCCGCCGGCCTGCCATCCTGGGCACGTGCACGGACTGCTGCTCGCCGCCGGCGCGGGCACCC GGATGGGTCGGCCCAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSDELRDRLRAADPASSLPPADPDGTARLLEDVMSTELTSENRETGTRDRGPLTWLVAAAAVLIIAGIGLFGVLNHDDDP MAPPTAVDDQTVTELTAPSGAAYAAKCMVPSADLIGQQTVAFAGTVTAIADGMVTLAVGHWYTGDPTDLVRVQAPPADLQ QLIGAVSFESGGRYLVSATDGRVTVCGMSAPWSADLAARYDEAFGS
Sequences:
>Translated_206_residues MSDELRDRLRAADPASSLPPADPDGTARLLEDVMSTELTSENRETGTRDRGPLTWLVAAAAVLIIAGIGLFGVLNHDDDP MAPPTAVDDQTVTELTAPSGAAYAAKCMVPSADLIGQQTVAFAGTVTAIADGMVTLAVGHWYTGDPTDLVRVQAPPADLQ QLIGAVSFESGGRYLVSATDGRVTVCGMSAPWSADLAARYDEAFGS >Mature_205_residues SDELRDRLRAADPASSLPPADPDGTARLLEDVMSTELTSENRETGTRDRGPLTWLVAAAAVLIIAGIGLFGVLNHDDDPM APPTAVDDQTVTELTAPSGAAYAAKCMVPSADLIGQQTVAFAGTVTAIADGMVTLAVGHWYTGDPTDLVRVQAPPADLQQ LIGAVSFESGGRYLVSATDGRVTVCGMSAPWSADLAARYDEAFGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21391; Mature: 21260
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDELRDRLRAADPASSLPPADPDGTARLLEDVMSTELTSENRETGTRDRGPLTWLVAAA CCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH AVLIIAGIGLFGVLNHDDDPMAPPTAVDDQTVTELTAPSGAAYAAKCMVPSADLIGQQTV HHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCHHHHCCHHH AFAGTVTAIADGMVTLAVGHWYTGDPTDLVRVQAPPADLQQLIGAVSFESGGRYLVSATD HHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECC GRVTVCGMSAPWSADLAARYDEAFGS CEEEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SDELRDRLRAADPASSLPPADPDGTARLLEDVMSTELTSENRETGTRDRGPLTWLVAAA CHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH AVLIIAGIGLFGVLNHDDDPMAPPTAVDDQTVTELTAPSGAAYAAKCMVPSADLIGQQTV HHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEEECCCCHHHHCCHHH AFAGTVTAIADGMVTLAVGHWYTGDPTDLVRVQAPPADLQQLIGAVSFESGGRYLVSATD HHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEEECC GRVTVCGMSAPWSADLAARYDEAFGS CEEEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA