| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717981
Identifier: 119717981
GI number: 119717981
Start: 3981907
End: 3983184
Strand: Reverse
Name: 119717981
Synonym: Noca_3759
Alternate gene names: NA
Gene position: 3983184-3981907 (Counterclockwise)
Preceding gene: 119717985
Following gene: 119717980
Centisome position: 79.89
GC content: 73.79
Gene sequence:
>1278_bases GTGACCGCCGACCTCGTGTACGTCGTCGCCGGGGGCAGCCTCCTGCTCGCCATCGTGTTGCCGGAGCTGCTCGACCGGTG GGCGGTGTCCGCGCCGATGGTGCTGGTCGCGGTCGGGATCGGCATCGGGTTCACTCCGCTGCCCGACGGGATGCCGTTGG ATCCGCAGGCCAACCGGGCCACGATCGAGCACGTCACCGAGCTCGCGGTGCTGGTCGCGCTGATGGGCGTCGGGCTGGCC CTCGACCGGCCGTTGCGGCCGCGCAGCAGCGCCTCCTGGGCCCGGTGGAGCACGACCTGGCGGCTGCTCGGCATCACGAT GCCGCTGTGCATCGGCGCCGTGGCCCTGCTCGCCTGGGGAGCCGGGGTCGCGCCGGCGGCGGCCCTGCTGCTCGGGGCGG CGCTCGCGCCGACGGACCCGGTGCTCGCGTCCGACGTCCAGGTCGCCGGCCCGCAGACCGGTGACCACGAGATCGACGAG TCCGACGAGCTGCGCTTCACCCTCACCTCCGAGGCCGGGCTCAACGACGGGCTCGCGTTCCCGTTCGTGTACGCCGCGAT CCTGCTCGCGACCGAGGGCGCGGTCTCGGGGTGGGCGCTGGAGTGGGTCGGCTTCTACCTGGTCGGGAAGGTCGTGATCG GCGTCGTCGCGGGCATCGCGGTCGGACGGGTGCTGGCCTGGGTCGCGTTCCGCTCCGCGAGCCGGTCGCTGCGGGTGGCC GAGCGCGGGGAGTCGCTGCTGGCGCTCGCGGCCCTGGTGTCGGCGTACGGTGTCGGCGAGGTCGTCGGCGGCTACGGCTT CCTCTCGGTGTTCGTCTGCGCGATGACGTTCCGGTCGGCGGAGCGCGCCCACGACTACCACGCGGCGATGCACGAGGTCG CCGAGCGGCTCGAGCGACTGCTCACGCTGTTCGTGCTGCTGGTGCTCGGCATCGCGCTCAGCCGCGGGCTGCTGGGCGGG CTCGACTGGCGCGGCGTCGTCCTCGGCCTCGGTCTGTTGCTCGTGATCCGCCCGCTCGCGGGGCTGGTCGCGCTCGCGCC GTTCGCCCGACGGGAGCGCCCACCGTTGACCCGGGGCCAGCGGTGGGCGGCGGCGTTCTTCGGCGTCCGCGGCGTCGGCT CGATCTACTACTTGGCCTACGCCGCCGGACACGCCGCGGAGCTGGGCACGGACTGGTTGTGGTCCACGGTCTCGTTCACG GTCGTCGCCTCGGTGCTCCTGCACGGCGTGCTCGCCTCACCGGTGCTGCGCCGCGTCGGTGATCCTGCGAGCAGGTGA
Upstream 100 bases:
>100_bases CGCACGCTCGCACCCTTCGTTCGCGGTCGGCCCGCGCCCGGACGGGGGGAGCCTCGAACGTCGGCGAGGATAACAAGGCG TCCCAGGGGTACTGCCCGGC
Downstream 100 bases:
>100_bases CCTTGGACCCTGCACCGGGCCGGAGGAGCGGACGCAGGGTGAGCCATGGGCCGCGCACGGCGTACGACGGTGGCGGGCCT GGCGCTCGTCGTGAACCTCG
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: Na+/H+ Antiporter; Sodium/Hydrogen Exchanger Family Protein; Cation Transport Related Protein; Na+/H+ Antiporter CPA1 Family Protein; Sodium/Proton Antiporter CPA1 Family; Transporter CPA2 Family
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRATIEHVTELAVLVALMGVGLA LDRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWGAGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDE SDELRFTLTSEAGLNDGLAFPFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVA ERGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERLLTLFVLLVLGIALSRGLLGG LDWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQRWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFT VVASVLLHGVLASPVLRRVGDPASR
Sequences:
>Translated_425_residues MTADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRATIEHVTELAVLVALMGVGLA LDRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWGAGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDE SDELRFTLTSEAGLNDGLAFPFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVA ERGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERLLTLFVLLVLGIALSRGLLGG LDWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQRWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFT VVASVLLHGVLASPVLRRVGDPASR >Mature_424_residues TADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRATIEHVTELAVLVALMGVGLAL DRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWGAGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDES DELRFTLTSEAGLNDGLAFPFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVAE RGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERLLTLFVLLVLGIALSRGLLGGL DWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQRWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFTV VASVLLHGVLASPVLRRVGDPASR
Specific function: Unknown
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44634; Mature: 44503
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRA CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHH TIEHVTELAVLVALMGVGLALDRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDESDELRFTLTSEAGLNDGLAF CCHHHHHHHHHHHHCCCCCCCHHCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH PFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ERGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERL HHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLFVLLVLGIALSRGLLGGLDWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFTVVASVLLHGVLASPVLRRVG HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPASR CCCCC >Mature Secondary Structure TADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRA CCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHH TIEHVTELAVLVALMGVGLALDRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWG HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDESDELRFTLTSEAGLNDGLAF CCHHHHHHHHHHHHCCCCCCCHHCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH PFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ERGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERL HHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLFVLLVLGIALSRGLLGGLDWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQ HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH RWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFTVVASVLLHGVLASPVLRRVG HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPASR CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA