Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717981

Identifier: 119717981

GI number: 119717981

Start: 3981907

End: 3983184

Strand: Reverse

Name: 119717981

Synonym: Noca_3759

Alternate gene names: NA

Gene position: 3983184-3981907 (Counterclockwise)

Preceding gene: 119717985

Following gene: 119717980

Centisome position: 79.89

GC content: 73.79

Gene sequence:

>1278_bases
GTGACCGCCGACCTCGTGTACGTCGTCGCCGGGGGCAGCCTCCTGCTCGCCATCGTGTTGCCGGAGCTGCTCGACCGGTG
GGCGGTGTCCGCGCCGATGGTGCTGGTCGCGGTCGGGATCGGCATCGGGTTCACTCCGCTGCCCGACGGGATGCCGTTGG
ATCCGCAGGCCAACCGGGCCACGATCGAGCACGTCACCGAGCTCGCGGTGCTGGTCGCGCTGATGGGCGTCGGGCTGGCC
CTCGACCGGCCGTTGCGGCCGCGCAGCAGCGCCTCCTGGGCCCGGTGGAGCACGACCTGGCGGCTGCTCGGCATCACGAT
GCCGCTGTGCATCGGCGCCGTGGCCCTGCTCGCCTGGGGAGCCGGGGTCGCGCCGGCGGCGGCCCTGCTGCTCGGGGCGG
CGCTCGCGCCGACGGACCCGGTGCTCGCGTCCGACGTCCAGGTCGCCGGCCCGCAGACCGGTGACCACGAGATCGACGAG
TCCGACGAGCTGCGCTTCACCCTCACCTCCGAGGCCGGGCTCAACGACGGGCTCGCGTTCCCGTTCGTGTACGCCGCGAT
CCTGCTCGCGACCGAGGGCGCGGTCTCGGGGTGGGCGCTGGAGTGGGTCGGCTTCTACCTGGTCGGGAAGGTCGTGATCG
GCGTCGTCGCGGGCATCGCGGTCGGACGGGTGCTGGCCTGGGTCGCGTTCCGCTCCGCGAGCCGGTCGCTGCGGGTGGCC
GAGCGCGGGGAGTCGCTGCTGGCGCTCGCGGCCCTGGTGTCGGCGTACGGTGTCGGCGAGGTCGTCGGCGGCTACGGCTT
CCTCTCGGTGTTCGTCTGCGCGATGACGTTCCGGTCGGCGGAGCGCGCCCACGACTACCACGCGGCGATGCACGAGGTCG
CCGAGCGGCTCGAGCGACTGCTCACGCTGTTCGTGCTGCTGGTGCTCGGCATCGCGCTCAGCCGCGGGCTGCTGGGCGGG
CTCGACTGGCGCGGCGTCGTCCTCGGCCTCGGTCTGTTGCTCGTGATCCGCCCGCTCGCGGGGCTGGTCGCGCTCGCGCC
GTTCGCCCGACGGGAGCGCCCACCGTTGACCCGGGGCCAGCGGTGGGCGGCGGCGTTCTTCGGCGTCCGCGGCGTCGGCT
CGATCTACTACTTGGCCTACGCCGCCGGACACGCCGCGGAGCTGGGCACGGACTGGTTGTGGTCCACGGTCTCGTTCACG
GTCGTCGCCTCGGTGCTCCTGCACGGCGTGCTCGCCTCACCGGTGCTGCGCCGCGTCGGTGATCCTGCGAGCAGGTGA

Upstream 100 bases:

>100_bases
CGCACGCTCGCACCCTTCGTTCGCGGTCGGCCCGCGCCCGGACGGGGGGAGCCTCGAACGTCGGCGAGGATAACAAGGCG
TCCCAGGGGTACTGCCCGGC

Downstream 100 bases:

>100_bases
CCTTGGACCCTGCACCGGGCCGGAGGAGCGGACGCAGGGTGAGCCATGGGCCGCGCACGGCGTACGACGGTGGCGGGCCT
GGCGCTCGTCGTGAACCTCG

Product: sodium/hydrogen exchanger

Products: NA

Alternate protein names: Na+/H+ Antiporter; Sodium/Hydrogen Exchanger Family Protein; Cation Transport Related Protein; Na+/H+ Antiporter CPA1 Family Protein; Sodium/Proton Antiporter CPA1 Family; Transporter CPA2 Family

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MTADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRATIEHVTELAVLVALMGVGLA
LDRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWGAGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDE
SDELRFTLTSEAGLNDGLAFPFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVA
ERGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERLLTLFVLLVLGIALSRGLLGG
LDWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQRWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFT
VVASVLLHGVLASPVLRRVGDPASR

Sequences:

>Translated_425_residues
MTADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRATIEHVTELAVLVALMGVGLA
LDRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWGAGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDE
SDELRFTLTSEAGLNDGLAFPFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVA
ERGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERLLTLFVLLVLGIALSRGLLGG
LDWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQRWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFT
VVASVLLHGVLASPVLRRVGDPASR
>Mature_424_residues
TADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRATIEHVTELAVLVALMGVGLAL
DRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWGAGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDES
DELRFTLTSEAGLNDGLAFPFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVAE
RGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERLLTLFVLLVLGIALSRGLLGGL
DWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQRWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFTV
VASVLLHGVLASPVLRRVGDPASR

Specific function: Unknown

COG id: COG0025

COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44634; Mature: 44503

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRA
CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHH
TIEHVTELAVLVALMGVGLALDRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDESDELRFTLTSEAGLNDGLAF
CCHHHHHHHHHHHHCCCCCCCHHCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH
PFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ERGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERL
HHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLFVLLVLGIALSRGLLGGLDWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQ
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
RWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFTVVASVLLHGVLASPVLRRVG
HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPASR
CCCCC
>Mature Secondary Structure 
TADLVYVVAGGSLLLAIVLPELLDRWAVSAPMVLVAVGIGIGFTPLPDGMPLDPQANRA
CCCEEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHH
TIEHVTELAVLVALMGVGLALDRPLRPRSSASWARWSTTWRLLGITMPLCIGAVALLAWG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGVAPAAALLLGAALAPTDPVLASDVQVAGPQTGDHEIDESDELRFTLTSEAGLNDGLAF
CCHHHHHHHHHHHHCCCCCCCHHCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHH
PFVYAAILLATEGAVSGWALEWVGFYLVGKVVIGVVAGIAVGRVLAWVAFRSASRSLRVA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ERGESLLALAALVSAYGVGEVVGGYGFLSVFVCAMTFRSAERAHDYHAAMHEVAERLERL
HHCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLFVLLVLGIALSRGLLGGLDWRGVVLGLGLLLVIRPLAGLVALAPFARRERPPLTRGQ
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
RWAAAFFGVRGVGSIYYLAYAAGHAAELGTDWLWSTVSFTVVASVLLHGVLASPVLRRVG
HHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPASR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA