| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is kbl [C]
Identifier: 119717978
GI number: 119717978
Start: 3976841
End: 3978034
Strand: Reverse
Name: kbl [C]
Synonym: Noca_3756
Alternate gene names: 119717978
Gene position: 3978034-3976841 (Counterclockwise)
Preceding gene: 119717979
Following gene: 119717975
Centisome position: 79.79
GC content: 70.35
Gene sequence:
>1194_bases ATGTACGGCGACGTGAAGCAGCAGCTGGCCCAGACCCTTGCGGAGATCGAGAGCGCGGGGCTCTACAAGCGCGAGCGCGA GATCACCACGCCACAGGCGGCGCACATCGCGACCACCGCGGGCGAGGCGCTGAACTTCTGCGCGAACAACTACCTCGGGT TCTCCGACCACCCCGACGTGATCGCGGCCAGCAAGGCGGCGCTGGACACCTGGGGCTTCGGGATGAGCTCGGTGCGGTTC ATCTGCGGCACCCAGACCCAGCACACGGAGCTGGAGCGGCGGCTCTCGGAGTTCCTGCACACCGAGGCGACGATCCTCTA CAGCTCCTGCTTCGACGCCAACGGCGGCGTCTTCGAGGTGCTGTGCGGTGAGGAGGACGCGATCGTCTCCGACGAGCTCA ACCACGCCTCGATCATCGACGGCATCCGGCTGAGCAAGGCGGCGCGGTATCGCTACAAGAACGCCGACCTGGCCGATCTG CGCGACCAGCTGGTCGCGGCCCGCGAAGCCGGCGCACGGCGGGTGCTGATCGCGACCGACGGCGTGTTCTCGATGGACGG CAGCTTCGCGCCGCTGTCGGAGATCTGCGACCTGGCCGACGAGTTCTCCGCCCTCGTGCTGGTCGACGACTCCCACGCCG TGGGGTTCGTGGGTCCTGGCGGGCGCGGCACGCCGGAGCTGTTCGGGGTGCTGGACCGGGTCGACATCATCACCGGCACC CTGGGCAAGGCGCTCGGCGGTGCGTCGGGCGGCTACGTCGCCTCCCACCAGGAGATCGTGGACCTGCTGCGGCAGCGCTC GCGGCCCTACCTGTTCTCGAACTCGGTCGCACCCGGCGTCGTCGCCGGTTCGCTCGCGGCCCTGGACCTGGTGACCTCCT CGAGCGAGGCGCGCGACACCCTTGAGGAGAACAGCGCGCTGTTCCGGTCGCTGATGACCGAGGCCGGCTTCTCGCTGCTG CCCGGCACGCACCCGATCACGCCGGTGATGTTCCCCGGCGAGGACGGCGCCCGGCTCGCCACCGCCATCGCGGACGACAT GCTCGCCCAGGGTGTCTACGTGATCGCGTTCTCGTTCCCGGTGGTGCCGCGGGGCAAGGCCCGGATCCGGGTCCAGCTCT CGGCCGCGCACTCGGAGGATGACGTCCGCCGCTGCGTGGCGGCGTTCGTCGCGGCCCGGGACGCCCAGGCCTGA
Upstream 100 bases:
>100_bases TCCGTGATCACGTGGCGTGGCCCGGCGGAGGACTGGGAGGAAGCCTTCGAGCACACCCGGTCCGGCACCGCCGGCAAGGC CGTCCTGGATTGGAGCTGAG
Downstream 100 bases:
>100_bases AGCCGCCCAGGCCTGAAGCCGCCGAGGCTCAGCTCAGTCCGCTTCCCAGTGCTCGCCGGAGAAGGCGAGCCCGCGGTGCG GCCGGGTGGTGCGGTAGTAG
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MYGDVKQQLAQTLAEIESAGLYKREREITTPQAAHIATTAGEALNFCANNYLGFSDHPDVIAASKAALDTWGFGMSSVRF ICGTQTQHTELERRLSEFLHTEATILYSSCFDANGGVFEVLCGEEDAIVSDELNHASIIDGIRLSKAARYRYKNADLADL RDQLVAAREAGARRVLIATDGVFSMDGSFAPLSEICDLADEFSALVLVDDSHAVGFVGPGGRGTPELFGVLDRVDIITGT LGKALGGASGGYVASHQEIVDLLRQRSRPYLFSNSVAPGVVAGSLAALDLVTSSSEARDTLEENSALFRSLMTEAGFSLL PGTHPITPVMFPGEDGARLATAIADDMLAQGVYVIAFSFPVVPRGKARIRVQLSAAHSEDDVRRCVAAFVAARDAQA
Sequences:
>Translated_397_residues MYGDVKQQLAQTLAEIESAGLYKREREITTPQAAHIATTAGEALNFCANNYLGFSDHPDVIAASKAALDTWGFGMSSVRF ICGTQTQHTELERRLSEFLHTEATILYSSCFDANGGVFEVLCGEEDAIVSDELNHASIIDGIRLSKAARYRYKNADLADL RDQLVAAREAGARRVLIATDGVFSMDGSFAPLSEICDLADEFSALVLVDDSHAVGFVGPGGRGTPELFGVLDRVDIITGT LGKALGGASGGYVASHQEIVDLLRQRSRPYLFSNSVAPGVVAGSLAALDLVTSSSEARDTLEENSALFRSLMTEAGFSLL PGTHPITPVMFPGEDGARLATAIADDMLAQGVYVIAFSFPVVPRGKARIRVQLSAAHSEDDVRRCVAAFVAARDAQA >Mature_397_residues MYGDVKQQLAQTLAEIESAGLYKREREITTPQAAHIATTAGEALNFCANNYLGFSDHPDVIAASKAALDTWGFGMSSVRF ICGTQTQHTELERRLSEFLHTEATILYSSCFDANGGVFEVLCGEEDAIVSDELNHASIIDGIRLSKAARYRYKNADLADL RDQLVAAREAGARRVLIATDGVFSMDGSFAPLSEICDLADEFSALVLVDDSHAVGFVGPGGRGTPELFGVLDRVDIITGT LGKALGGASGGYVASHQEIVDLLRQRSRPYLFSNSVAPGVVAGSLAALDLVTSSSEARDTLEENSALFRSLMTEAGFSLL PGTHPITPVMFPGEDGARLATAIADDMLAQGVYVIAFSFPVVPRGKARIRVQLSAAHSEDDVRRCVAAFVAARDAQA
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7657118, Length=384, Percent_Identity=56.5104166666667, Blast_Score=426, Evalue=1e-119, Organism=Homo sapiens, GI284448556, Length=407, Percent_Identity=53.3169533169533, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI83977442, Length=357, Percent_Identity=36.1344537815126, Blast_Score=218, Evalue=5e-57, Organism=Homo sapiens, GI83977440, Length=357, Percent_Identity=36.1344537815126, Blast_Score=218, Evalue=6e-57, Organism=Homo sapiens, GI83977444, Length=357, Percent_Identity=36.1344537815126, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI4502025, Length=340, Percent_Identity=36.1764705882353, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI40316939, Length=340, Percent_Identity=36.1764705882353, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI4758668, Length=356, Percent_Identity=32.3033707865169, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI119220554, Length=358, Percent_Identity=32.122905027933, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI5454084, Length=298, Percent_Identity=28.1879194630872, Blast_Score=122, Evalue=7e-28, Organism=Escherichia coli, GI1790046, Length=390, Percent_Identity=59.2307692307692, Blast_Score=465, Evalue=1e-132, Organism=Escherichia coli, GI1786993, Length=347, Percent_Identity=32.5648414985591, Blast_Score=166, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71994529, Length=386, Percent_Identity=54.4041450777202, Blast_Score=416, Evalue=1e-116, Organism=Caenorhabditis elegans, GI32566772, Length=365, Percent_Identity=30.1369863013699, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17560912, Length=363, Percent_Identity=28.9256198347107, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI17560914, Length=363, Percent_Identity=28.6501377410468, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI71982625, Length=368, Percent_Identity=22.8260869565217, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71982617, Length=368, Percent_Identity=22.8260869565217, Blast_Score=96, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6320438, Length=371, Percent_Identity=33.6927223719677, Blast_Score=208, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320267, Length=358, Percent_Identity=28.4916201117318, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6323954, Length=292, Percent_Identity=28.4246575342466, Blast_Score=110, Evalue=4e-25, Organism=Drosophila melanogaster, GI24662918, Length=389, Percent_Identity=53.2133676092545, Blast_Score=420, Evalue=1e-118, Organism=Drosophila melanogaster, GI17137420, Length=341, Percent_Identity=34.3108504398827, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI17136286, Length=365, Percent_Identity=29.8630136986301, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24653280, Length=381, Percent_Identity=26.7716535433071, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24653276, Length=381, Percent_Identity=26.7716535433071, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24653278, Length=381, Percent_Identity=26.7716535433071, Blast_Score=116, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011282 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 42311; Mature: 42311
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGDVKQQLAQTLAEIESAGLYKREREITTPQAAHIATTAGEALNFCANNYLGFSDHPDV CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC IAASKAALDTWGFGMSSVRFICGTQTQHTELERRLSEFLHTEATILYSSCFDANGGVFEV EEHHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE LCGEEDAIVSDELNHASIIDGIRLSKAARYRYKNADLADLRDQLVAAREAGARRVLIATD EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEC GVFSMDGSFAPLSEICDLADEFSALVLVDDSHAVGFVGPGGRGTPELFGVLDRVDIITGT CEEECCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHH LGKALGGASGGYVASHQEIVDLLRQRSRPYLFSNSVAPGVVAGSLAALDLVTSSSEARDT HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHH LEENSALFRSLMTEAGFSLLPGTHPITPVMFPGEDGARLATAIADDMLAQGVYVIAFSFP HHHHHHHHHHHHHHCCCEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECC VVPRGKARIRVQLSAAHSEDDVRRCVAAFVAARDAQA CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYGDVKQQLAQTLAEIESAGLYKREREITTPQAAHIATTAGEALNFCANNYLGFSDHPDV CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC IAASKAALDTWGFGMSSVRFICGTQTQHTELERRLSEFLHTEATILYSSCFDANGGVFEV EEHHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE LCGEEDAIVSDELNHASIIDGIRLSKAARYRYKNADLADLRDQLVAAREAGARRVLIATD EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEC GVFSMDGSFAPLSEICDLADEFSALVLVDDSHAVGFVGPGGRGTPELFGVLDRVDIITGT CEEECCCCCCCHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHH LGKALGGASGGYVASHQEIVDLLRQRSRPYLFSNSVAPGVVAGSLAALDLVTSSSEARDT HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHH LEENSALFRSLMTEAGFSLLPGTHPITPVMFPGEDGARLATAIADDMLAQGVYVIAFSFP HHHHHHHHHHHHHHCCCEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECC VVPRGKARIRVQLSAAHSEDDVRRCVAAFVAARDAQA CCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]