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The map label for this gene is desA3 [H]

Identifier: 119717889

GI number: 119717889

Start: 3889830

End: 3891032

Strand: Reverse

Name: desA3 [H]

Synonym: Noca_3667

Alternate gene names: 119717889

Gene position: 3891032-3889830 (Counterclockwise)

Preceding gene: 119717890

Following gene: 119717888

Centisome position: 78.04

GC content: 67.66

Gene sequence:

>1203_bases
ATGGCCATCTCGGACGTCAAGGAGTACACCCACCTCACCGAGGCGGAGGTGGAGCAGATCGGCCGCGAGCTCGACGCGAT
CCGGGCCGAGATCGAGGACTCGCGCGGCGCCGCGGACGCGGCGTACATCAACCGGATCATCACGATCCAGCGGGGGCTGG
CCGCGGCCGGCCGGGTGGCGCTGTTCGCCAGCAACCGCAAGCCCGCTTGGGCCGCGGGCGTCGGGCTGCTCGCGGTGGCG
AAGATCCTCGAGAACATGGAGATCGGCCACAACGTCATGCACGGACAGTGGGACTGGATGAACGACCCCGAGATCCACTC
CTCCAACTGGGAGTGGGACACCGCGCAGCCGGCCGAGCAGTGGAAGCACAGCCACAACTACGTCCACCACCAGTTCACCA
ACGTGCTCGGCTACGACAACGACATCGGCTACGGCATCCTCCGGATGGCGCGCGAGCAGAAGTGGCACCCGGCGAACCTC
GGACAACCCGTCTACAACGCCCTGCTCGCGACCCTGTTCGAGTGGGGGGTGGCCCTGCACGACCTGGACATCGAGCGGAT
CCGCAAGGGCGAGAAGGACCCGAAGGAGATGAAGCGGCAGCTCAAGCAGATCTTCCGCAAGGGCCGCAACCAGATCCTCA
AGGACTACGTCGTCTACCCGGCGCTGTCCGGTCGCAACTGGAAGACCACGCTGACCGCCAACCTCACCGCCAACGTGATC
CGCAACCTGTGGTCCTACGGGATCATCTTCTGCGGACACTTCCCCGACGGGGCGCTGCACTTCACCGAGGAGGAGATCGA
GGACGAGACCCGCTCGGAGTGGTACCTGCGCCAGATCCTGGGCGCGGCCAACTTCAACGGCAGCCCGCTGCTGCACGTCA
TGAGCGGCAACCTCGGCTTCCAGATCGAGCATCACCTGTTCCCGGACCTGCCGAGCAACCGGTACGCCGAGATCGCGGTG
CGGGTGCGCGAGCTGTGCGACAAGTACGACCTGCCCTACACCACCGGGCCGCTGCACCGGCAGTACGGCCAGGCGCTGCG
CACGATCATCAAGCTCTCGCTGCCGAACTCGATGACCTCGGGCAACCAGCCTCCCCCGGTGGCGGAGCCGCCGAGCCCGG
AGCGGGACCGCAAGCGCCGCTCCGACGCCGAGCGGCCGCCCCGACGCCGGGAGCTCGGGGGCTGGATGCGGAGCGCCTCG
TGA

Upstream 100 bases:

>100_bases
GGAGTTCTCCCAACCGAACGAGCGCGTGCAGACCTGCGTCACCGCCGCCGTCGGCGACTGCACCCTCGACATCTGACCGA
CTGCATCCCTGGAGGATCAC

Downstream 100 bases:

>100_bases
TGGCCCCGGTGCCGGCGCTGGGCTCGACCCGGTGGGTGACCCGGTGTGCGCTGAGCCGGATCTGCGGCGTCTGCACCGAG
TCGCTGGGCCGGCCGGTCGC

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(9)-desaturase; Stearoyl-CoA desaturase [H]

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MAISDVKEYTHLTEAEVEQIGRELDAIRAEIEDSRGAADAAYINRIITIQRGLAAAGRVALFASNRKPAWAAGVGLLAVA
KILENMEIGHNVMHGQWDWMNDPEIHSSNWEWDTAQPAEQWKHSHNYVHHQFTNVLGYDNDIGYGILRMAREQKWHPANL
GQPVYNALLATLFEWGVALHDLDIERIRKGEKDPKEMKRQLKQIFRKGRNQILKDYVVYPALSGRNWKTTLTANLTANVI
RNLWSYGIIFCGHFPDGALHFTEEEIEDETRSEWYLRQILGAANFNGSPLLHVMSGNLGFQIEHHLFPDLPSNRYAEIAV
RVRELCDKYDLPYTTGPLHRQYGQALRTIIKLSLPNSMTSGNQPPPVAEPPSPERDRKRRSDAERPPRRRELGGWMRSAS

Sequences:

>Translated_400_residues
MAISDVKEYTHLTEAEVEQIGRELDAIRAEIEDSRGAADAAYINRIITIQRGLAAAGRVALFASNRKPAWAAGVGLLAVA
KILENMEIGHNVMHGQWDWMNDPEIHSSNWEWDTAQPAEQWKHSHNYVHHQFTNVLGYDNDIGYGILRMAREQKWHPANL
GQPVYNALLATLFEWGVALHDLDIERIRKGEKDPKEMKRQLKQIFRKGRNQILKDYVVYPALSGRNWKTTLTANLTANVI
RNLWSYGIIFCGHFPDGALHFTEEEIEDETRSEWYLRQILGAANFNGSPLLHVMSGNLGFQIEHHLFPDLPSNRYAEIAV
RVRELCDKYDLPYTTGPLHRQYGQALRTIIKLSLPNSMTSGNQPPPVAEPPSPERDRKRRSDAERPPRRRELGGWMRSAS
>Mature_399_residues
AISDVKEYTHLTEAEVEQIGRELDAIRAEIEDSRGAADAAYINRIITIQRGLAAAGRVALFASNRKPAWAAGVGLLAVAK
ILENMEIGHNVMHGQWDWMNDPEIHSSNWEWDTAQPAEQWKHSHNYVHHQFTNVLGYDNDIGYGILRMAREQKWHPANLG
QPVYNALLATLFEWGVALHDLDIERIRKGEKDPKEMKRQLKQIFRKGRNQILKDYVVYPALSGRNWKTTLTANLTANVIR
NLWSYGIIFCGHFPDGALHFTEEEIEDETRSEWYLRQILGAANFNGSPLLHVMSGNLGFQIEHHLFPDLPSNRYAEIAVR
VRELCDKYDLPYTTGPLHRQYGQALRTIIKLSLPNSMTSGNQPPPVAEPPSPERDRKRRSDAERPPRRRELGGWMRSAS

Specific function: Desaturates stearoyl-CoA to form oleoyl-CoA [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable). Note=Has been shown to be membrane-associated but no reliable trans-membrane regions are predicted by bioinformatics tools [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 45712; Mature: 45581

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISDVKEYTHLTEAEVEQIGRELDAIRAEIEDSRGAADAAYINRIITIQRGLAAAGRVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEE
LFASNRKPAWAAGVGLLAVAKILENMEIGHNVMHGQWDWMNDPEIHSSNWEWDTAQPAEQ
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
WKHSHNYVHHQFTNVLGYDNDIGYGILRMAREQKWHPANLGQPVYNALLATLFEWGVALH
HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DLDIERIRKGEKDPKEMKRQLKQIFRKGRNQILKDYVVYPALSGRNWKTTLTANLTANVI
HCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH
RNLWSYGIIFCGHFPDGALHFTEEEIEDETRSEWYLRQILGAANFNGSPLLHVMSGNLGF
HHHHHCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCE
QIEHHLFPDLPSNRYAEIAVRVRELCDKYDLPYTTGPLHRQYGQALRTIIKLSLPNSMTS
EEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GNQPPPVAEPPSPERDRKRRSDAERPPRRRELGGWMRSAS
CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AISDVKEYTHLTEAEVEQIGRELDAIRAEIEDSRGAADAAYINRIITIQRGLAAAGRVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEE
LFASNRKPAWAAGVGLLAVAKILENMEIGHNVMHGQWDWMNDPEIHSSNWEWDTAQPAEQ
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
WKHSHNYVHHQFTNVLGYDNDIGYGILRMAREQKWHPANLGQPVYNALLATLFEWGVALH
HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DLDIERIRKGEKDPKEMKRQLKQIFRKGRNQILKDYVVYPALSGRNWKTTLTANLTANVI
HCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHH
RNLWSYGIIFCGHFPDGALHFTEEEIEDETRSEWYLRQILGAANFNGSPLLHVMSGNLGF
HHHHHCCEEEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCE
QIEHHLFPDLPSNRYAEIAVRVRELCDKYDLPYTTGPLHRQYGQALRTIIKLSLPNSMTS
EEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
GNQPPPVAEPPSPERDRKRRSDAERPPRRRELGGWMRSAS
CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]