Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119717888

Identifier: 119717888

GI number: 119717888

Start: 3889528

End: 3889830

Strand: Reverse

Name: 119717888

Synonym: Noca_3666

Alternate gene names: NA

Gene position: 3889830-3889528 (Counterclockwise)

Preceding gene: 119717889

Following gene: 119717887

Centisome position: 78.02

GC content: 74.59

Gene sequence:

>303_bases
ATGGCCCCGGTGCCGGCGCTGGGCTCGACCCGGTGGGTGACCCGGTGTGCGCTGAGCCGGATCTGCGGCGTCTGCACCGA
GTCGCTGGGCCGGCCGGTCGCGTTCCTCGGCACGCCCGAGGAGGTCGCCCGCAACGCCTTCCACCTCCCGCCGATGCACG
TCGGCTGCGCGGAGGACCTGCGCCGTACGCCGGACACCGACCCGACCTGGCAGGTCACGCTCACCGCCGGCTTCGAGTTC
GTGCGCGCGGCCCGGGAGGACCTCGACCGCCGCCCCACCTTCCAGCCCAACTCGCTGCTCTGA

Upstream 100 bases:

>100_bases
CGGAGCCGCCGAGCCCGGAGCGGGACCGCAAGCGCCGCTCCGACGCCGAGCGGCCGCCCCGACGCCGGGAGCTCGGGGGC
TGGATGCGGAGCGCCTCGTG

Downstream 100 bases:

>100_bases
GCACCAAGGCAAGAGCCCCGCTGCCGCCTTCTCGAACCCACCCCGGGAGGTGGGCACGAGCGCGCGGCAACGGGGCTCTG
CGGTGGTCGCATGATCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MAPVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDLRRTPDTDPTWQVTLTAGFEF
VRAAREDLDRRPTFQPNSLL

Sequences:

>Translated_100_residues
MAPVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDLRRTPDTDPTWQVTLTAGFEF
VRAAREDLDRRPTFQPNSLL
>Mature_99_residues
APVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDLRRTPDTDPTWQVTLTAGFEFV
RAAREDLDRRPTFQPNSLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11050; Mature: 10919

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCHHHH
RRTPDTDPTWQVTLTAGFEFVRAAREDLDRRPTFQPNSLL
HCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
APVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCHHHH
RRTPDTDPTWQVTLTAGFEFVRAAREDLDRRPTFQPNSLL
HCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA