| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717888
Identifier: 119717888
GI number: 119717888
Start: 3889528
End: 3889830
Strand: Reverse
Name: 119717888
Synonym: Noca_3666
Alternate gene names: NA
Gene position: 3889830-3889528 (Counterclockwise)
Preceding gene: 119717889
Following gene: 119717887
Centisome position: 78.02
GC content: 74.59
Gene sequence:
>303_bases ATGGCCCCGGTGCCGGCGCTGGGCTCGACCCGGTGGGTGACCCGGTGTGCGCTGAGCCGGATCTGCGGCGTCTGCACCGA GTCGCTGGGCCGGCCGGTCGCGTTCCTCGGCACGCCCGAGGAGGTCGCCCGCAACGCCTTCCACCTCCCGCCGATGCACG TCGGCTGCGCGGAGGACCTGCGCCGTACGCCGGACACCGACCCGACCTGGCAGGTCACGCTCACCGCCGGCTTCGAGTTC GTGCGCGCGGCCCGGGAGGACCTCGACCGCCGCCCCACCTTCCAGCCCAACTCGCTGCTCTGA
Upstream 100 bases:
>100_bases CGGAGCCGCCGAGCCCGGAGCGGGACCGCAAGCGCCGCTCCGACGCCGAGCGGCCGCCCCGACGCCGGGAGCTCGGGGGC TGGATGCGGAGCGCCTCGTG
Downstream 100 bases:
>100_bases GCACCAAGGCAAGAGCCCCGCTGCCGCCTTCTCGAACCCACCCCGGGAGGTGGGCACGAGCGCGCGGCAACGGGGCTCTG CGGTGGTCGCATGATCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MAPVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDLRRTPDTDPTWQVTLTAGFEF VRAAREDLDRRPTFQPNSLL
Sequences:
>Translated_100_residues MAPVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDLRRTPDTDPTWQVTLTAGFEF VRAAREDLDRRPTFQPNSLL >Mature_99_residues APVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDLRRTPDTDPTWQVTLTAGFEFV RAAREDLDRRPTFQPNSLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11050; Mature: 10919
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCHHHH RRTPDTDPTWQVTLTAGFEFVRAAREDLDRRPTFQPNSLL HCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure APVPALGSTRWVTRCALSRICGVCTESLGRPVAFLGTPEEVARNAFHLPPMHVGCAEDL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCHHHH RRTPDTDPTWQVTLTAGFEFVRAAREDLDRRPTFQPNSLL HCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA