| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717882
Identifier: 119717882
GI number: 119717882
Start: 3885357
End: 3885719
Strand: Reverse
Name: 119717882
Synonym: Noca_3660
Alternate gene names: NA
Gene position: 3885719-3885357 (Counterclockwise)
Preceding gene: 119717883
Following gene: 119717880
Centisome position: 77.93
GC content: 64.46
Gene sequence:
>363_bases TTGACGGTTCTGCTCACGGTCGAGGATCTCCTGTCCCTCGTGGCGGACCTCGGGGTCGGACCGGTGCGCGACGTGGGTCT GCTGGACTCGGCAGCTCATCGGCCGGGGGCTGTCCTGTACGGACACGAGGCCTACCAGGACGTGGACCGCAAGGCAGCAG CGCTGCTCGACTCACTCGTTGGCAACCATGCGCTCGTCGATGGAAACAAGCGACTGGGTTGGCTGGCCGTTGTCGTCTTC TACGGCCTCAACGGCGTCGACCTCGGTGCGCCCGATGATCCTGCCTTTGAGCTCGTGATGTCCGTGGCGCGCAGAGAAGC GCCTCTCGACGAAATCGCAGCAACTCTGGTGCGCTGGCATTGA
Upstream 100 bases:
>100_bases TCCGTGAGGCGGCCTCTCGCCATGCGCACCAGGCCAAGGTGGCCGACCTGTCTGCCCGGGCTCGTGAGCGCTATGCAGAC GTACTGGACCGGCTCGGCCG
Downstream 100 bases:
>100_bases GCGCGCTCGGCGGCAGATGAGTGCGGTCGAGAACATTGCGGGCCCTGGACTTGGTCAGGGTCAGTGCACGGCGCGGATGA CCTGTTCGGCGAGGAGTGCG
Product: death-on-curing family protein
Products: NA
Alternate protein names: Death-On-Curing Protein; Death On Curing Protein; Fic Family xin-Antitoxin System Toxin Component; Filamentation Induced By CAMP Protein Fic; Death-On-Curing Protein DOC; Doc Protein; Prophage Maintenance System Killer Protein
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MTVLLTVEDLLSLVADLGVGPVRDVGLLDSAAHRPGAVLYGHEAYQDVDRKAAALLDSLVGNHALVDGNKRLGWLAVVVF YGLNGVDLGAPDDPAFELVMSVARREAPLDEIAATLVRWH
Sequences:
>Translated_120_residues MTVLLTVEDLLSLVADLGVGPVRDVGLLDSAAHRPGAVLYGHEAYQDVDRKAAALLDSLVGNHALVDGNKRLGWLAVVVF YGLNGVDLGAPDDPAFELVMSVARREAPLDEIAATLVRWH >Mature_119_residues TVLLTVEDLLSLVADLGVGPVRDVGLLDSAAHRPGAVLYGHEAYQDVDRKAAALLDSLVGNHALVDGNKRLGWLAVVVFY GLNGVDLGAPDDPAFELVMSVARREAPLDEIAATLVRWH
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12796; Mature: 12665
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLLTVEDLLSLVADLGVGPVRDVGLLDSAAHRPGAVLYGHEAYQDVDRKAAALLDSLV CEEEEEHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHH GNHALVDGNKRLGWLAVVVFYGLNGVDLGAPDDPAFELVMSVARREAPLDEIAATLVRWH CCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure TVLLTVEDLLSLVADLGVGPVRDVGLLDSAAHRPGAVLYGHEAYQDVDRKAAALLDSLV EEEEEHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHH GNHALVDGNKRLGWLAVVVFYGLNGVDLGAPDDPAFELVMSVARREAPLDEIAATLVRWH CCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA