| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717875
Identifier: 119717875
GI number: 119717875
Start: 3877396
End: 3878814
Strand: Reverse
Name: 119717875
Synonym: Noca_3653
Alternate gene names: NA
Gene position: 3878814-3877396 (Counterclockwise)
Preceding gene: 119717879
Following gene: 119717874
Centisome position: 77.8
GC content: 76.53
Gene sequence:
>1419_bases GTGCCCGGTACGACACCGTCCATCATCCAAGGTGGGATGGGGGTCGGCGTCTCGTCCTGGCAGCTCGCCCGGTCCGTGGC CCTGGCCGGCCACCTCGGCGTGGTCTCCGGTACGGCGCTCGACGCGACGCTCGCCCGCCGGCTGCAGGACGGCGACCCGG ACGGGCACGCCCGGCGCGCCCTGGCCGCGTTCCCCGACCAGGCGATGGTCGCCCGGGCGCTCGACCGCTACCACCTCCCC GAGGGCCGGACGCCGGGCCGCCCGTACCGGCCGACGCCGAAGCCGTCGCTGCGGCCCAGCCGGCACGCCCAGGAGCTGGC CGTCCTCGGCAACTTCGCCGAGGTGTGGCTGGCCAAGCAGGGCCACGAGGGGACCGTCGGCATCAACTTCCTCGAGAAGA TCCAGCTGGCCACGCCCGCGGCCGCGCTCGGCGCGATGCTCGCCGGGGTGGACGTCGTCCTGATGGGGGCCGGGGTGCCC CGGGAGATCCCGCAGCTGCTCACCGACCTCGCGCGCGGCGACGTCGGGGGGATCGGCGTCGACGTGCACGGCGCACCCGA GCGGTCGCGGATCGAGGTCGACCCGCGGGGCCTGCTCGGTCGGCACCTGCCGCCGCTGCGCCGGCCGCGGTTCCTGGCCA TCGTGTCCGCGACCGTCCTGGCCGCCTACCTTGCCCGCGACGACGCGACCCGGCCCGACGGGTTCGTGATCGAGGGTCCG GTCGCGGGCGGCCACAACGCGCCGCCACGCGGGACGCTCGTGGTCGACGACGACGGGGAGCCCGTGTACGGCGACCGCGA CGCGGTCGACCTCGCCAAGGTCGCGGCCCTCGGCCTGCCGTTCTGGCTGGCGGGCGGGCACGGGACGCCCGAGGGCCTGC AGTCGGCCCGCGCCGCCGGGGCTGCCGGCATCCAGGTCGGGACGCTGTTCGCGCTCGCCGCAGAGTCGGGACTGCGCCCC GAGCTGCGTGAGCAGGTCGGCGCCCAGCTCGGCGCCGGGACGCTGCGGGTACGGACCGACGTGCGCTCCTCGCCGACCGG CTTCCCGTTCAAGGTCGCCCGGATCGAGGGCACGCTCTCCGAGTCCGAGGTGTACGAGGACCGCGAGCGGCTGTGCGACC TGGGCTACCTGCGCACGCCGTACCTCACCGCGGCGGGCCGGATCGGGTACCGGTGCCCGGGCGAGCCGGTGGCGGTCTAC CAGCGCAAGGGCGGCGACCTCGCCGACACGGTCGGCCGCAGGTGCCTGTGCAACGCGCTGACCGCCGACGTCGGCCTGGG ACAGACCCGCCCGGACGGCTACCGGGAGCCGGGCCTGATCACGCTCGGGAGCGACCTCAGCGGCCCGCGCCGCCTGCTCG AGCGCCATCCGGGCGGCTGGACGGCCGGGCAGGCGGTGGCCTGGCTGGAGGGCCGATGA
Upstream 100 bases:
>100_bases GCGACGACTGAGGGTCCTTCGGCCCTGGGCGCGGCCCGGGCGCGCCTGCGAACCTGCGGAGCGGTCTGTGTCCCGCAGCC GTCCGACGTGAGGAGAGCCC
Downstream 100 bases:
>100_bases GTACCCGATCCAACGCCGGACGGCGGCGGCGCGGCATCCTGGGAGCCATGACGCTTCCTGGCCCGAGCACCGGCACCGCC ACCGAAGCCTGGTTCCGGAG
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Oxidoreductase
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MPGTTPSIIQGGMGVGVSSWQLARSVALAGHLGVVSGTALDATLARRLQDGDPDGHARRALAAFPDQAMVARALDRYHLP EGRTPGRPYRPTPKPSLRPSRHAQELAVLGNFAEVWLAKQGHEGTVGINFLEKIQLATPAAALGAMLAGVDVVLMGAGVP REIPQLLTDLARGDVGGIGVDVHGAPERSRIEVDPRGLLGRHLPPLRRPRFLAIVSATVLAAYLARDDATRPDGFVIEGP VAGGHNAPPRGTLVVDDDGEPVYGDRDAVDLAKVAALGLPFWLAGGHGTPEGLQSARAAGAAGIQVGTLFALAAESGLRP ELREQVGAQLGAGTLRVRTDVRSSPTGFPFKVARIEGTLSESEVYEDRERLCDLGYLRTPYLTAAGRIGYRCPGEPVAVY QRKGGDLADTVGRRCLCNALTADVGLGQTRPDGYREPGLITLGSDLSGPRRLLERHPGGWTAGQAVAWLEGR
Sequences:
>Translated_472_residues MPGTTPSIIQGGMGVGVSSWQLARSVALAGHLGVVSGTALDATLARRLQDGDPDGHARRALAAFPDQAMVARALDRYHLP EGRTPGRPYRPTPKPSLRPSRHAQELAVLGNFAEVWLAKQGHEGTVGINFLEKIQLATPAAALGAMLAGVDVVLMGAGVP REIPQLLTDLARGDVGGIGVDVHGAPERSRIEVDPRGLLGRHLPPLRRPRFLAIVSATVLAAYLARDDATRPDGFVIEGP VAGGHNAPPRGTLVVDDDGEPVYGDRDAVDLAKVAALGLPFWLAGGHGTPEGLQSARAAGAAGIQVGTLFALAAESGLRP ELREQVGAQLGAGTLRVRTDVRSSPTGFPFKVARIEGTLSESEVYEDRERLCDLGYLRTPYLTAAGRIGYRCPGEPVAVY QRKGGDLADTVGRRCLCNALTADVGLGQTRPDGYREPGLITLGSDLSGPRRLLERHPGGWTAGQAVAWLEGR >Mature_471_residues PGTTPSIIQGGMGVGVSSWQLARSVALAGHLGVVSGTALDATLARRLQDGDPDGHARRALAAFPDQAMVARALDRYHLPE GRTPGRPYRPTPKPSLRPSRHAQELAVLGNFAEVWLAKQGHEGTVGINFLEKIQLATPAAALGAMLAGVDVVLMGAGVPR EIPQLLTDLARGDVGGIGVDVHGAPERSRIEVDPRGLLGRHLPPLRRPRFLAIVSATVLAAYLARDDATRPDGFVIEGPV AGGHNAPPRGTLVVDDDGEPVYGDRDAVDLAKVAALGLPFWLAGGHGTPEGLQSARAAGAAGIQVGTLFALAAESGLRPE LREQVGAQLGAGTLRVRTDVRSSPTGFPFKVARIEGTLSESEVYEDRERLCDLGYLRTPYLTAAGRIGYRCPGEPVAVYQ RKGGDLADTVGRRCLCNALTADVGLGQTRPDGYREPGLITLGSDLSGPRRLLERHPGGWTAGQAVAWLEGR
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49639; Mature: 49508
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTTPSIIQGGMGVGVSSWQLARSVALAGHLGVVSGTALDATLARRLQDGDPDGHARRA CCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCHHHHHH LAAFPDQAMVARALDRYHLPEGRTPGRPYRPTPKPSLRPSRHAQELAVLGNFAEVWLAKQ HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCC GHEGTVGINFLEKIQLATPAAALGAMLAGVDVVLMGAGVPREIPQLLTDLARGDVGGIGV CCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEE DVHGAPERSRIEVDPRGLLGRHLPPLRRPRFLAIVSATVLAAYLARDDATRPDGFVIEGP EECCCCCCCEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC VAGGHNAPPRGTLVVDDDGEPVYGDRDAVDLAKVAALGLPFWLAGGHGTPEGLQSARAAG CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCC AAGIQVGTLFALAAESGLRPELREQVGAQLGAGTLRVRTDVRSSPTGFPFKVARIEGTLS CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCC ESEVYEDRERLCDLGYLRTPYLTAAGRIGYRCPGEPVAVYQRKGGDLADTVGRRCLCNAL HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH TADVGLGQTRPDGYREPGLITLGSDLSGPRRLLERHPGGWTAGQAVAWLEGR HHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCC >Mature Secondary Structure PGTTPSIIQGGMGVGVSSWQLARSVALAGHLGVVSGTALDATLARRLQDGDPDGHARRA CCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCHHHHHH LAAFPDQAMVARALDRYHLPEGRTPGRPYRPTPKPSLRPSRHAQELAVLGNFAEVWLAKQ HHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCC GHEGTVGINFLEKIQLATPAAALGAMLAGVDVVLMGAGVPREIPQLLTDLARGDVGGIGV CCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEE DVHGAPERSRIEVDPRGLLGRHLPPLRRPRFLAIVSATVLAAYLARDDATRPDGFVIEGP EECCCCCCCEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC VAGGHNAPPRGTLVVDDDGEPVYGDRDAVDLAKVAALGLPFWLAGGHGTPEGLQSARAAG CCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCC AAGIQVGTLFALAAESGLRPELREQVGAQLGAGTLRVRTDVRSSPTGFPFKVARIEGTLS CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCC ESEVYEDRERLCDLGYLRTPYLTAAGRIGYRCPGEPVAVYQRKGGDLADTVGRRCLCNAL HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH TADVGLGQTRPDGYREPGLITLGSDLSGPRRLLERHPGGWTAGQAVAWLEGR HHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA