| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is phoB [C]
Identifier: 119717713
GI number: 119717713
Start: 3700574
End: 3701002
Strand: Reverse
Name: phoB [C]
Synonym: Noca_3491
Alternate gene names: 119717713
Gene position: 3701002-3700574 (Counterclockwise)
Preceding gene: 119717714
Following gene: 119717712
Centisome position: 74.23
GC content: 68.07
Gene sequence:
>429_bases GTGTCGCCGCTTGCTCATCGCCTGCTCCTCGGTCAGACGTCTGGGCGGAACCTGGCGAGCGGGCCTCATTTCGGCCATTA CGCTGCGGCGTGGCTGGCGACTTCCTACCGTGGGAACGTGATCGAGGTGCAGGACATCAGGCTCGATCCGGTCTCGCGGC GGACGTGGCGTGGATCTGACGAGATCGTGCTCTCGCGCAAGGAGTTCGACCTCGTCCGGGCGCTGATGGAGAGGGCGGGC GAGGTCGTCACCCGGGACGACCTGATGCGCGACGTCTGGCACACGACGTTCTGGACCTCGTCGAAGACCATCGACGTGCA CCTGGGCTGGGTCCGGCGCAAGCTCGGCGACGACAGCCGGCACCCGCGCCTGATCACCACGATCCGCGGCGAGGGGCTGC GCTTCGAGACCGAGGACCGGACCCGCTGA
Upstream 100 bases:
>100_bases TCGACTTCGTCGCCGCGCGGGCCGCGGGATCGCTCTGGGGGCCGGACTCCCGACGATGTGGTTGCGGTGGGCGCGTTGCC TGCGGGAGGTCATGCTGGAG
Downstream 100 bases:
>100_bases GCGACCCCGTCTAGAGTTCCGGTGTGCCCAGCCCCGGTGAGTCCAGCCCCGAGCGTCGGCTCGGCCAGCGGATGGCCCCC ACCCTCGCCGTGATCGGCGG
Product: transcriptional regulator domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSPLAHRLLLGQTSGRNLASGPHFGHYAAAWLATSYRGNVIEVQDIRLDPVSRRTWRGSDEIVLSRKEFDLVRALMERAG EVVTRDDLMRDVWHTTFWTSSKTIDVHLGWVRRKLGDDSRHPRLITTIRGEGLRFETEDRTR
Sequences:
>Translated_142_residues MSPLAHRLLLGQTSGRNLASGPHFGHYAAAWLATSYRGNVIEVQDIRLDPVSRRTWRGSDEIVLSRKEFDLVRALMERAG EVVTRDDLMRDVWHTTFWTSSKTIDVHLGWVRRKLGDDSRHPRLITTIRGEGLRFETEDRTR >Mature_141_residues SPLAHRLLLGQTSGRNLASGPHFGHYAAAWLATSYRGNVIEVQDIRLDPVSRRTWRGSDEIVLSRKEFDLVRALMERAGE VVTRDDLMRDVWHTTFWTSSKTIDVHLGWVRRKLGDDSRHPRLITTIRGEGLRFETEDRTR
Specific function: This Protein Is A Positive Regulator For The Phosphate Regulon. Transcription Of This Operon Is Positively Regulated By Phob And Phor When Phosphate Is Limited. [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=99, Percent_Identity=35.3535353535354, Blast_Score=69, Evalue=1e-13, Organism=Escherichia coli, GI87082012, Length=98, Percent_Identity=36.734693877551, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1786784, Length=98, Percent_Identity=35.7142857142857, Blast_Score=63, Evalue=7e-12, Organism=Escherichia coli, GI1786911, Length=103, Percent_Identity=32.0388349514563, Blast_Score=60, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 16409; Mature: 16278
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLAHRLLLGQTSGRNLASGPHFGHYAAAWLATSYRGNVIEVQDIRLDPVSRRTWRGSD CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECEECCCCCCCCCCCC EIVLSRKEFDLVRALMERAGEVVTRDDLMRDVWHTTFWTSSKTIDVHLGWVRRKLGDDSR CEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHCCCCC HPRLITTIRGEGLRFETEDRTR CCEEEEEECCCCCEECCCCCCC >Mature Secondary Structure SPLAHRLLLGQTSGRNLASGPHFGHYAAAWLATSYRGNVIEVQDIRLDPVSRRTWRGSD CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECEECCCCCCCCCCCC EIVLSRKEFDLVRALMERAGEVVTRDDLMRDVWHTTFWTSSKTIDVHLGWVRRKLGDDSR CEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHCCCCC HPRLITTIRGEGLRFETEDRTR CCEEEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1554697 [H]