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The map label for this gene is rpiB [H]

Identifier: 119717705

GI number: 119717705

Start: 3693250

End: 3693738

Strand: Reverse

Name: rpiB [H]

Synonym: Noca_3483

Alternate gene names: 119717705

Gene position: 3693738-3693250 (Counterclockwise)

Preceding gene: 119717706

Following gene: 119717704

Centisome position: 74.08

GC content: 71.17

Gene sequence:

>489_bases
ATGCGCGTGCACCTCGGCTGCGACCATGCCGGACTCGACCTCAAGGACCACCTCAGTCGCTGGCTCACCGACCACGGCTA
CGAGCCCGTGGACCACGGCCCGTTCGCCTACGACGCCCTCGACGACTACCCCGTGTTCTGCCTGCGCGCCGCGGCGGCGG
TGGCCGAGGAGCGGGCCGCCGGGCGGGACAGCCTGGGCGTGGTGATCGGCGGCTCCGGCAACGGCGAGCAGATGGCCGCG
AACAAGGTGCACGGCATCCGGTGTGCGCTGGTCTGGTCGGAGGAGACCGCGGTCCTCGCCCGTCAGCACAACGATGCCAA
CGTCGTCTCGGTCGGCGGCCGGATGCACTCCTTGGAGGACATGACCCGCTTCGTCGAGATCTTCCTCGCCGAGCCGTTCA
GCGGCGAGGAGCGACACGTGCGTCGGATCGGGCAGCTGGCGGCGTACGAGAGCACCGGCGAGCTCCCCGCCCTCCCCGGC
GATGCCTGA

Upstream 100 bases:

>100_bases
CACGGCTTCTGGCGCCACCCGAGCGTCTTCACCGCGTCCGAGCCGTTGATCCGGCAGGCGGCGGGCTTCCTGCGCCAGCA
CGGCTGACAGGATGGGCGCC

Downstream 100 bases:

>100_bases
GGGCCACACCCTCCACCGCCTGGCCGACGAGATCACCGCGACCTTCGCCGGCCGGGTGGTGCGCACCGGCAGCCCGCAGG
GCCGGTTCGCCGACTCGGCC

Product: ribose-5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRVHLGCDHAGLDLKDHLSRWLTDHGYEPVDHGPFAYDALDDYPVFCLRAAAAVAEERAAGRDSLGVVIGGSGNGEQMAA
NKVHGIRCALVWSEETAVLARQHNDANVVSVGGRMHSLEDMTRFVEIFLAEPFSGEERHVRRIGQLAAYESTGELPALPG
DA

Sequences:

>Translated_162_residues
MRVHLGCDHAGLDLKDHLSRWLTDHGYEPVDHGPFAYDALDDYPVFCLRAAAAVAEERAAGRDSLGVVIGGSGNGEQMAA
NKVHGIRCALVWSEETAVLARQHNDANVVSVGGRMHSLEDMTRFVEIFLAEPFSGEERHVRRIGQLAAYESTGELPALPG
DA
>Mature_162_residues
MRVHLGCDHAGLDLKDHLSRWLTDHGYEPVDHGPFAYDALDDYPVFCLRAAAAVAEERAAGRDSLGVVIGGSGNGEQMAA
NKVHGIRCALVWSEETAVLARQHNDANVVSVGGRMHSLEDMTRFVEIFLAEPFSGEERHVRRIGQLAAYESTGELPALPG
DA

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=150, Percent_Identity=35.3333333333333, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011860
- InterPro:   IPR003500 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 17563; Mature: 17563

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVHLGCDHAGLDLKDHLSRWLTDHGYEPVDHGPFAYDALDDYPVFCLRAAAAVAEERAA
CEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHC
GRDSLGVVIGGSGNGEQMAANKVHGIRCALVWSEETAVLARQHNDANVVSVGGRMHSLED
CCCCCEEEECCCCCCCHHHHCCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCHHHHHH
MTRFVEIFLAEPFSGEERHVRRIGQLAAYESTGELPALPGDA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVHLGCDHAGLDLKDHLSRWLTDHGYEPVDHGPFAYDALDDYPVFCLRAAAAVAEERAA
CEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHC
GRDSLGVVIGGSGNGEQMAANKVHGIRCALVWSEETAVLARQHNDANVVSVGGRMHSLED
CCCCCEEEECCCCCCCHHHHCCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCHHHHHH
MTRFVEIFLAEPFSGEERHVRRIGQLAAYESTGELPALPGDA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA