| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717632
Identifier: 119717632
GI number: 119717632
Start: 3612507
End: 3612719
Strand: Reverse
Name: 119717632
Synonym: Noca_3410
Alternate gene names: NA
Gene position: 3612719-3612507 (Counterclockwise)
Preceding gene: 119717633
Following gene: 119717631
Centisome position: 72.46
GC content: 70.42
Gene sequence:
>213_bases ATGACCGACCTGCGCAGGCCGAAGCGCCGCTCCGAGTACGTGGACTCCGGACCCGCCATCTATGTCGATTCCTTCGCCAC CATCCGGCGAGAGGCCGGCCTGCGGGCCGTGCCGGCCGATGCCGAGAAGCTCGCCGCCACCGTCCGTGGCCGCCGCGGGG GATCGGCGATGACCTCGTCAGCCCTCAATGCACTCGCCCAGGAGGCAGAGTGA
Upstream 100 bases:
>100_bases AGGCCGGCCTCGGCCGCCAAGCCATCGATGACCTGACCGCAGCAGTCGGTGACGTGGTCGTCACGCCGTGGCGTGGCGTG CTCATTCCCGAGGAGAGCAG
Downstream 100 bases:
>100_bases GCACCACCCCACGTCGTCCTCGCTCCGCTCCGGGCGCCGCGGGGGCCCCGAAAGGCACCGGCCGTTTGACGGTCGTCGGC ATCGGCCCCGGCGACCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MTDLRRPKRRSEYVDSGPAIYVDSFATIRREAGLRAVPADAEKLAATVRGRRGGSAMTSSALNALAQEAE
Sequences:
>Translated_70_residues MTDLRRPKRRSEYVDSGPAIYVDSFATIRREAGLRAVPADAEKLAATVRGRRGGSAMTSSALNALAQEAE >Mature_69_residues TDLRRPKRRSEYVDSGPAIYVDSFATIRREAGLRAVPADAEKLAATVRGRRGGSAMTSSALNALAQEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7537; Mature: 7405
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLRRPKRRSEYVDSGPAIYVDSFATIRREAGLRAVPADAEKLAATVRGRRGGSAMTSS CCCCCCCCHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHH ALNALAQEAE HHHHHHHCCC >Mature Secondary Structure TDLRRPKRRSEYVDSGPAIYVDSFATIRREAGLRAVPADAEKLAATVRGRRGGSAMTSS CCCCCCCHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHH ALNALAQEAE HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA