| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is thiE [H]
Identifier: 119717624
GI number: 119717624
Start: 3605866
End: 3606459
Strand: Reverse
Name: thiE [H]
Synonym: Noca_3402
Alternate gene names: 119717624
Gene position: 3606459-3605866 (Counterclockwise)
Preceding gene: 119717625
Following gene: 119717623
Centisome position: 72.33
GC content: 77.44
Gene sequence:
>594_bases GTGACGGGGGTCGACCTGCCGCGGCTGCTGGTCCTCACCGACCGTCACCAGCTCCCTGCCGGGCGCGACCTCGTCGGCGC GCTCGCCGACTGCGTCGCGGCCGGTCTCGAGGCCGTTCTGCTCCGGGAGCTCGACCTGCCCGGGCAGGAGCGGCAAGCGC TCGCCCGCGCGCTCGGCGCCACCGGCGTCACCGTGATCCTCGCGCGCACCTGGCTCCCCGGCGCCGCGGCGGTGCACCTC GCCGCCGCCCAGAGCCCGCACGACGCCGGTGCCGCGCCCTTCCACGGCCGCTCGTGCCACGACGACCACGAGATACGCCG CGCGGTCGCCGGCGGCGCGTCGTACCTGACGATCTCGCCAGTCGCGGCCTCCGCCTCCAAGCCGGGCTACGGCCCCATCC TCGGGGAGGACGGCGTACGCCGCGCGGTTGCGCTCGCCGGCGAGGTGCCGGTCTTCGCCCTCGGCGGGGTCAAGGTCCAG AACGCCGCCGCGATGCGGGCAGCCGGCGCCCACGGGGTCGCCGTCATGGGTGCCGTCATGCGCGCCCCCGACCCGGCCGA CGTCGTCGAGCGCGTGCTGGGGGAGGCCCGATGA
Upstream 100 bases:
>100_bases GGGCCGCGGTCGAGGCCGGTGAGTTGGCACGCGGGGCCGGTCGCATCCCCCGGCTCACCACCGCTCGCGCGTCGAGCCCG ATGGCCGGACGGGTGGGGAC
Downstream 100 bases:
>100_bases GAAGCCCCCTGGTCGCCCTCACCGTGGCGGGCACCGACTCCGGCGGTGCCGCCGGAGTCGCCGCCGACCTGGCGACGTTC GCGGCACTGGGCGCGCACGG
Product: thiamine monophosphate synthase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTGVDLPRLLVLTDRHQLPAGRDLVGALADCVAAGLEAVLLRELDLPGQERQALARALGATGVTVILARTWLPGAAAVHL AAAQSPHDAGAAPFHGRSCHDDHEIRRAVAGGASYLTISPVAASASKPGYGPILGEDGVRRAVALAGEVPVFALGGVKVQ NAAAMRAAGAHGVAVMGAVMRAPDPADVVERVLGEAR
Sequences:
>Translated_197_residues MTGVDLPRLLVLTDRHQLPAGRDLVGALADCVAAGLEAVLLRELDLPGQERQALARALGATGVTVILARTWLPGAAAVHL AAAQSPHDAGAAPFHGRSCHDDHEIRRAVAGGASYLTISPVAASASKPGYGPILGEDGVRRAVALAGEVPVFALGGVKVQ NAAAMRAAGAHGVAVMGAVMRAPDPADVVERVLGEAR >Mature_196_residues TGVDLPRLLVLTDRHQLPAGRDLVGALADCVAAGLEAVLLRELDLPGQERQALARALGATGVTVILARTWLPGAAAVHLA AAQSPHDAGAAPFHGRSCHDDHEIRRAVAGGASYLTISPVAASASKPGYGPILGEDGVRRAVALAGEVPVFALGGVKVQN AAAMRAAGAHGVAVMGAVMRAPDPADVVERVLGEAR
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR016229 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 19969; Mature: 19838
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVDLPRLLVLTDRHQLPAGRDLVGALADCVAAGLEAVLLRELDLPGQERQALARALGA CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC TGVTVILARTWLPGAAAVHLAAAQSPHDAGAAPFHGRSCHDDHEIRRAVAGGASYLTISP CCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECC VAASASKPGYGPILGEDGVRRAVALAGEVPVFALGGVKVQNAAAMRAAGAHGVAVMGAVM HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEECCHHHHHHCCCCHHHHHHHHH RAPDPADVVERVLGEAR CCCCHHHHHHHHHHCCC >Mature Secondary Structure TGVDLPRLLVLTDRHQLPAGRDLVGALADCVAAGLEAVLLRELDLPGQERQALARALGA CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC TGVTVILARTWLPGAAAVHLAAAQSPHDAGAAPFHGRSCHDDHEIRRAVAGGASYLTISP CCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECC VAASASKPGYGPILGEDGVRRAVALAGEVPVFALGGVKVQNAAAMRAAGAHGVAVMGAVM HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEECCHHHHHHCCCCHHHHHHHHH RAPDPADVVERVLGEAR CCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA