| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717565
Identifier: 119717565
GI number: 119717565
Start: 3547236
End: 3547703
Strand: Reverse
Name: 119717565
Synonym: Noca_3341
Alternate gene names: NA
Gene position: 3547703-3547236 (Counterclockwise)
Preceding gene: 119717572
Following gene: 119717563
Centisome position: 71.16
GC content: 71.79
Gene sequence:
>468_bases ATGAAGGAAGCCGCAACCGAGTTCCTCGCCCACAACCGGATCGCCGTCACGGGCGTGTCCCACGCGCCGAAGGGCCACGG CGCGAACATGGTCTACCAGCGGCTGCGGGAGCGCGGGTACGACGTCGTCGCGATCAACCCGAACGCCGACCGCGTCGAGG GCGACGCCTGCTTCCCGGACCTGAGGTCCGTGCCCGGCGGGGTCGAGGCGGTCGTGATCGGCACCCGTCCGTCGACGGCC GAGGAGACGATGCACGAGTGCGTCGACCTCGGCATCACGCACGTCTGGATGCACCGCGGCCCGGGCGCCGGGAGCGTCTC GGACGCCGCGACGGCGTACGGGCGCGAGCACGGGGTCACCGTGATCCCCGGCGGCTGCCCGTGCATGTTCGGCCCGACCG CCGACGGCGGGCACAAGGCGATGCGCTGGATGTTCAGCCTCACCGGCAACGTGCCTCGGAAGGTCTGA
Upstream 100 bases:
>100_bases TCGGGGCCTCGGGAGGACCCAGGGTCGAAGGTCATCGTGGCGGGCCCTTTGGCCCTGGCCGGTCGGCCCGGCGGCGACGA GCATCGGTCTCGTGGTCACC
Downstream 100 bases:
>100_bases GCGATCACTCGGCCGCGAGCAGCCGCTCGCACTCGGCGACCAGCCGCGCGCGCAGCGGGGCGGCCCGCTCGGCGAAGCCG CGCTGCGCCTCGGCGTACTC
Product: CoA-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPDLRSVPGGVEAVVIGTRPSTA EETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVTVIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV
Sequences:
>Translated_155_residues MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPDLRSVPGGVEAVVIGTRPSTA EETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVTVIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV >Mature_155_residues MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPDLRSVPGGVEAVVIGTRPSTA EETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVTVIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV
Specific function: Unknown
COG id: COG1832
COG function: function code R; Predicted CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16465; Mature: 16465
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPD CCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCH LRSVPGGVEAVVIGTRPSTAEETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVT HHCCCCCCEEEEEECCCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHCCCCE VIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV EECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPD CCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCH LRSVPGGVEAVVIGTRPSTAEETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVT HHCCCCCCEEEEEECCCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHCCCCE VIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV EECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA