Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119717565

Identifier: 119717565

GI number: 119717565

Start: 3547236

End: 3547703

Strand: Reverse

Name: 119717565

Synonym: Noca_3341

Alternate gene names: NA

Gene position: 3547703-3547236 (Counterclockwise)

Preceding gene: 119717572

Following gene: 119717563

Centisome position: 71.16

GC content: 71.79

Gene sequence:

>468_bases
ATGAAGGAAGCCGCAACCGAGTTCCTCGCCCACAACCGGATCGCCGTCACGGGCGTGTCCCACGCGCCGAAGGGCCACGG
CGCGAACATGGTCTACCAGCGGCTGCGGGAGCGCGGGTACGACGTCGTCGCGATCAACCCGAACGCCGACCGCGTCGAGG
GCGACGCCTGCTTCCCGGACCTGAGGTCCGTGCCCGGCGGGGTCGAGGCGGTCGTGATCGGCACCCGTCCGTCGACGGCC
GAGGAGACGATGCACGAGTGCGTCGACCTCGGCATCACGCACGTCTGGATGCACCGCGGCCCGGGCGCCGGGAGCGTCTC
GGACGCCGCGACGGCGTACGGGCGCGAGCACGGGGTCACCGTGATCCCCGGCGGCTGCCCGTGCATGTTCGGCCCGACCG
CCGACGGCGGGCACAAGGCGATGCGCTGGATGTTCAGCCTCACCGGCAACGTGCCTCGGAAGGTCTGA

Upstream 100 bases:

>100_bases
TCGGGGCCTCGGGAGGACCCAGGGTCGAAGGTCATCGTGGCGGGCCCTTTGGCCCTGGCCGGTCGGCCCGGCGGCGACGA
GCATCGGTCTCGTGGTCACC

Downstream 100 bases:

>100_bases
GCGATCACTCGGCCGCGAGCAGCCGCTCGCACTCGGCGACCAGCCGCGCGCGCAGCGGGGCGGCCCGCTCGGCGAAGCCG
CGCTGCGCCTCGGCGTACTC

Product: CoA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPDLRSVPGGVEAVVIGTRPSTA
EETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVTVIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV

Sequences:

>Translated_155_residues
MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPDLRSVPGGVEAVVIGTRPSTA
EETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVTVIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV
>Mature_155_residues
MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPDLRSVPGGVEAVVIGTRPSTA
EETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVTVIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16465; Mature: 16465

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPD
CCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCH
LRSVPGGVEAVVIGTRPSTAEETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVT
HHCCCCCCEEEEEECCCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHCCCCE
VIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV
EECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKEAATEFLAHNRIAVTGVSHAPKGHGANMVYQRLRERGYDVVAINPNADRVEGDACFPD
CCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCH
LRSVPGGVEAVVIGTRPSTAEETMHECVDLGITHVWMHRGPGAGSVSDAATAYGREHGVT
HHCCCCCCEEEEEECCCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCHHHHHHHHCCCCE
VIPGGCPCMFGPTADGGHKAMRWMFSLTGNVPRKV
EECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA