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The map label for this gene is sgcQ [H]

Identifier: 119717538

GI number: 119717538

Start: 3522073

End: 3522879

Strand: Reverse

Name: sgcQ [H]

Synonym: Noca_3314

Alternate gene names: 119717538

Gene position: 3522879-3522073 (Counterclockwise)

Preceding gene: 119717539

Following gene: 119717537

Centisome position: 70.66

GC content: 67.29

Gene sequence:

>807_bases
ATGAGCAACTGGTTGCACGAGGTCTTCGACGTACCCAAGCCGATCGTGGGAATGTGCCATCTGCCGGCACTTCCCGGAGA
CCCTGGATACGACGCGGCGGGCGGGATGGACAAGATCCTCGCCCACGCCCGCCAGGAGATCGACGCCCTGCAAACCGGTG
GTGTCGACGGCATCCTGATCTCGAACGAGTTCAGCCTCCCGTACCTCACCCGCACCGAGCCGATCACGGCGATCACGATG
GCGCGGACCATCGGCGAGCTCATCTCGGAGATCCAGGTTCCGTTCGGTGTGAACGTGCTCTGGGACGGCGTCGCATCGAT
CGACCTCGCGATGGCCACCGGCGCGGCATTCGTGCGTGAGGTGTTCACCGGGGTCTACGCCTCCGACTTCGGCATGTGGA
ACACGGACGTCGGCCGTGCCGCCCGTCACCGCGCCCAGGTCGGAGCAGGTGGCGTCCGGCTGCTGTACAACATCGTCCCG
GAGGGCGCCACGTACGTCGCGGGTCGAGAACTCGACCGGATGACCCGCTCGACGGTCTTCAACGGCGCCCCCGACGGCCT
GTGCGTCTCCGGCCTCACGGCAGGAGCGGCGACCGACACTCCGACCCTCAAGATCGTCAAGGAGAACGCCGGCGACGTCC
CCGTGTTCGTCAACACGGGCGTTCGCCCGGACACGGTCGCCGAGAGCCTGCAGTACGCCGACGGCGCCATCGTGGGTACC
TGGTTCAAGCGCGAGGGGAAGTTCACGAACGACGTCGACGCCGCGCGCGTCGCGGAGCTCATGGGGGTCGTCAGGGAGCT
GCGCTGA

Upstream 100 bases:

>100_bases
TGGTCGCGCGTCGATGGGCCGTCCTCCTGATGCTCGCCCCCTTGGCCGTGCCGGACAGACCACGGCCACCCGCATCCACA
GGAGAGGAACCGCACCACCC

Downstream 100 bases:

>100_bases
TGACGTTCATCGGTATCGATATCGGCACCTTCGAGACCAAGGGTGTCCTCGTCGATGCGGACGGTGAGGTCCTTGCGCTG
GCCCGGCGGCGACACGGCAT

Product: photosystem I assembly BtpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSNWLHEVFDVPKPIVGMCHLPALPGDPGYDAAGGMDKILAHARQEIDALQTGGVDGILISNEFSLPYLTRTEPITAITM
ARTIGELISEIQVPFGVNVLWDGVASIDLAMATGAAFVREVFTGVYASDFGMWNTDVGRAARHRAQVGAGGVRLLYNIVP
EGATYVAGRELDRMTRSTVFNGAPDGLCVSGLTAGAATDTPTLKIVKENAGDVPVFVNTGVRPDTVAESLQYADGAIVGT
WFKREGKFTNDVDAARVAELMGVVRELR

Sequences:

>Translated_268_residues
MSNWLHEVFDVPKPIVGMCHLPALPGDPGYDAAGGMDKILAHARQEIDALQTGGVDGILISNEFSLPYLTRTEPITAITM
ARTIGELISEIQVPFGVNVLWDGVASIDLAMATGAAFVREVFTGVYASDFGMWNTDVGRAARHRAQVGAGGVRLLYNIVP
EGATYVAGRELDRMTRSTVFNGAPDGLCVSGLTAGAATDTPTLKIVKENAGDVPVFVNTGVRPDTVAESLQYADGAIVGT
WFKREGKFTNDVDAARVAELMGVVRELR
>Mature_267_residues
SNWLHEVFDVPKPIVGMCHLPALPGDPGYDAAGGMDKILAHARQEIDALQTGGVDGILISNEFSLPYLTRTEPITAITMA
RTIGELISEIQVPFGVNVLWDGVASIDLAMATGAAFVREVFTGVYASDFGMWNTDVGRAARHRAQVGAGGVRLLYNIVPE
GATYVAGRELDRMTRSTVFNGAPDGLCVSGLTAGAATDTPTLKIVKENAGDVPVFVNTGVRPDTVAESLQYADGAIVGTW
FKREGKFTNDVDAARVAELMGVVRELR

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=266, Percent_Identity=55.2631578947368, Blast_Score=310, Evalue=9e-86,
Organism=Caenorhabditis elegans, GI115532828, Length=274, Percent_Identity=27.3722627737226, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24659916, Length=262, Percent_Identity=26.3358778625954, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 28539; Mature: 28408

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNWLHEVFDVPKPIVGMCHLPALPGDPGYDAAGGMDKILAHARQEIDALQTGGVDGILI
CCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
SNEFSLPYLTRTEPITAITMARTIGELISEIQVPFGVNVLWDGVASIDLAMATGAAFVRE
ECCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
VFTGVYASDFGMWNTDVGRAARHRAQVGAGGVRLLYNIVPEGATYVAGRELDRMTRSTVF
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHC
NGAPDGLCVSGLTAGAATDTPTLKIVKENAGDVPVFVNTGVRPDTVAESLQYADGAIVGT
CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEE
WFKREGKFTNDVDAARVAELMGVVRELR
EECCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNWLHEVFDVPKPIVGMCHLPALPGDPGYDAAGGMDKILAHARQEIDALQTGGVDGILI
CHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
SNEFSLPYLTRTEPITAITMARTIGELISEIQVPFGVNVLWDGVASIDLAMATGAAFVRE
ECCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
VFTGVYASDFGMWNTDVGRAARHRAQVGAGGVRLLYNIVPEGATYVAGRELDRMTRSTVF
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHC
NGAPDGLCVSGLTAGAATDTPTLKIVKENAGDVPVFVNTGVRPDTVAESLQYADGAIVGT
CCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEE
WFKREGKFTNDVDAARVAELMGVVRELR
EECCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]