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The map label for this gene is 119717534

Identifier: 119717534

GI number: 119717534

Start: 3516608

End: 3518146

Strand: Reverse

Name: 119717534

Synonym: Noca_3310

Alternate gene names: NA

Gene position: 3518146-3516608 (Counterclockwise)

Preceding gene: 119717536

Following gene: 119717533

Centisome position: 70.56

GC content: 74.01

Gene sequence:

>1539_bases
GTGACGCTGGCGGAGCTGTTGGCCGCGTACTCGCTGGCGACCGACCTCGGCCTCGGCCAGCCGATGGAGCACCTGCTCCG
ATCGTGGCGGATCGCCGCCCGACTCGGCACCCACGTCGGACTCCCCGATGGCGAGCAGGCGGCCCTGTTCTACGTCGCGA
TGCTCTCGTGGGTGGGCTGCGTCGCGGACGCACCGGAGGTCGCGGCCACCTTCGGGGACGACATCTCCTTCCGCTCCGAC
AGCTACGACGTCGACCTCGGGGGAATGGCGGCGTACCGCTTCTTCCTGGGCCACGCGGGGGCCGGCGCCTCGGCGACGGC
GCGCGCGAGGGTGGTCGCCACGCTCCTGGCCACCGGCGGTCGCCGCGTCATGCGCGGCATCCAGGCCCACTGCCTGATCA
CGTCCACACTGGCCGAGCGGCTCGGTCTCGACGACGCCGTGTCGGCGGCGGTGCGGCAGTTCTTCGCGCGCTGGGACGGC
CAGGGCGTCCCGCCGCACGTCGGCGGGGAGGACCTGTCGCCCTGGGTCCGGCTCTTCCACGTCGGCGACATCACCGAGGT
GTACCACCGCAACGGCGGCGTGGAGGCCGCGGTCCGGGTCGCGCGGGAGCGCCGAGGACGGCAGTTCGACCCGGCTCTCG
CCGACGCCTTCTGCGAGATCGCACCAGAAGTCCTGCCTGCTCTCGGCGAGGACGACGACCTCCGTGGCATGCTCGCCGAC
GAGCCCGCCCTGCGGCGCTGCCTGTCCGGGCCCGAGCTCGACGAGGCGCTGGCAGCGCTCGCCGACTTCACCGACCTGCG
CTCACCGAACCGCGCCGGCCACTCCAGTGGCGTCGCCGAGCTCGCCGGGTCGGCCGCGTCGTGCCTCGGCCTTCCGGCCG
TGGACGTGGCCGCGTCGCGACGAGCCGGGTACCTGCACGACATCGGGCTCCACGGTGTCCCGTCGACGATCCTGGACAAG
CCGGGTGCCCTGTCCGCGACGGAGTGGGAACGGGTCCGGGTCAGCTCGTACTACACCGAGCGGGTGCTGGCGCAGCCGGC
GCCACTCGCCAGGATCGGCGCGATCGCGTCGTACACGAACGAGCGGATGGACGGCAGCGGCTACCACCGGGGCGCGAGCG
GGGCGTCGATCCCGATGGCGGGCCGGGTCCTGGCGGCGGCCTGCGCCTTGCGCACGCTGACCGAACCCCGGGTCGGGCGG
CCGCCGAAGTCGGTGAAGGACGCTGCAACGGAGCTCCGCAGCGAGGTGCGCGCCGGCCGTCTGGACGTCGACGCCACCGA
TGCGGTCCTCTCCGCCGCAGGAGCAGGCGGCCGACGCAGGGTCGCCGGACCCGCCGGGCTGACCCAGCGCGAGGTCGAGG
TCCTGGTCCTGATCGCGCGCGGCGTGGCGACCAACGAGGTCGCGGCGCGCCTCGGGGTGTCCCGCAAGACCGCGGCCACG
CACATCGAGCGGATCTACGCCAAGACCGGCGCGTGCTCGCGCTCGACGGCGACCTTGTTCGCCCTGCGCAACGGCCTCCT
CGACCCGCTCGCGACCTGA

Upstream 100 bases:

>100_bases
ACCCCGGCGTCACCCGCACCCGTCCTCTCGTCGTGGATGGCCGCGCCCGCCTGGGCGCCGTACGCTGAGCGTCGTGGAGC
GGGAGGCCGACGACTCGGGC

Downstream 100 bases:

>100_bases
GCCTCGATCCACCGATTTCCGCCTGCTGCGCGCCACCATCTGGGCACGCTGGCTGCGTTGCCGACGCTCGATAGACGCCC
TGGTATGCCTTCGCGCCGGA

Product: regulatory protein LuxR

Products: NA

Alternate protein names: PAS/PAC Sensor Protein; Response Regulator; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Metal-Dependent Phosphohydrolase; LuxR Family Transcriptional Regulator; HD Domain-Containing Protein; HDIG Domain-Containing Protein; HD-GYP Domain-Containing Protein; Transcriptional Regulator LuxR Family; Metal-Dependent Phosphohydrolase HD Subdomain; Sensory Box Protein; Response Regulator Receiver Protein; Metal Dependent Phophohydrolase; Diguanylate Cyclase Domain Protein; Two-Component System Response Regulator; HDIG Domain Protein; Sensory Protein With HD-GYP Output Domain; Two-Component Response Regulator Variant; Pas/Pac Sensor Protein; PAS Sensor Protein; Two-Component Response Regulator; Ggdef Domain; GAF Domain/HD Domain-Containing Protein; Phosphohydrolase; Diguanylate Cyclase With PAS/PAC Sensor; Ggdef Domain/Hd Domain Protein; Transport/Signal Transduction System Protein; Sensor Histidine Kinase/GAF Domain-Containing Protein; Sensory Box-Containing Diguanylate Cyclase; Transcription Regulator Protein; HD-Hydrolase Domain-Containing Protein; Fused HD-GYP/HD-Hydrolase Domain-Containing Protein; Fusion HD-GYP Domain And HD-Hydrolase Domain; Domain HDIG Containing Protein; Regulatory Protein LuxR; HD Domain Protein; Signaling Protein; HD-GYP Domain Protein; Diguanylate Cyclase With GAF Sensor

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MTLAELLAAYSLATDLGLGQPMEHLLRSWRIAARLGTHVGLPDGEQAALFYVAMLSWVGCVADAPEVAATFGDDISFRSD
SYDVDLGGMAAYRFFLGHAGAGASATARARVVATLLATGGRRVMRGIQAHCLITSTLAERLGLDDAVSAAVRQFFARWDG
QGVPPHVGGEDLSPWVRLFHVGDITEVYHRNGGVEAAVRVARERRGRQFDPALADAFCEIAPEVLPALGEDDDLRGMLAD
EPALRRCLSGPELDEALAALADFTDLRSPNRAGHSSGVAELAGSAASCLGLPAVDVAASRRAGYLHDIGLHGVPSTILDK
PGALSATEWERVRVSSYYTERVLAQPAPLARIGAIASYTNERMDGSGYHRGASGASIPMAGRVLAAACALRTLTEPRVGR
PPKSVKDAATELRSEVRAGRLDVDATDAVLSAAGAGGRRRVAGPAGLTQREVEVLVLIARGVATNEVAARLGVSRKTAAT
HIERIYAKTGACSRSTATLFALRNGLLDPLAT

Sequences:

>Translated_512_residues
MTLAELLAAYSLATDLGLGQPMEHLLRSWRIAARLGTHVGLPDGEQAALFYVAMLSWVGCVADAPEVAATFGDDISFRSD
SYDVDLGGMAAYRFFLGHAGAGASATARARVVATLLATGGRRVMRGIQAHCLITSTLAERLGLDDAVSAAVRQFFARWDG
QGVPPHVGGEDLSPWVRLFHVGDITEVYHRNGGVEAAVRVARERRGRQFDPALADAFCEIAPEVLPALGEDDDLRGMLAD
EPALRRCLSGPELDEALAALADFTDLRSPNRAGHSSGVAELAGSAASCLGLPAVDVAASRRAGYLHDIGLHGVPSTILDK
PGALSATEWERVRVSSYYTERVLAQPAPLARIGAIASYTNERMDGSGYHRGASGASIPMAGRVLAAACALRTLTEPRVGR
PPKSVKDAATELRSEVRAGRLDVDATDAVLSAAGAGGRRRVAGPAGLTQREVEVLVLIARGVATNEVAARLGVSRKTAAT
HIERIYAKTGACSRSTATLFALRNGLLDPLAT
>Mature_511_residues
TLAELLAAYSLATDLGLGQPMEHLLRSWRIAARLGTHVGLPDGEQAALFYVAMLSWVGCVADAPEVAATFGDDISFRSDS
YDVDLGGMAAYRFFLGHAGAGASATARARVVATLLATGGRRVMRGIQAHCLITSTLAERLGLDDAVSAAVRQFFARWDGQ
GVPPHVGGEDLSPWVRLFHVGDITEVYHRNGGVEAAVRVARERRGRQFDPALADAFCEIAPEVLPALGEDDDLRGMLADE
PALRRCLSGPELDEALAALADFTDLRSPNRAGHSSGVAELAGSAASCLGLPAVDVAASRRAGYLHDIGLHGVPSTILDKP
GALSATEWERVRVSSYYTERVLAQPAPLARIGAIASYTNERMDGSGYHRGASGASIPMAGRVLAAACALRTLTEPRVGRP
PKSVKDAATELRSEVRAGRLDVDATDAVLSAAGAGGRRRVAGPAGLTQREVEVLVLIARGVATNEVAARLGVSRKTAATH
IERIYAKTGACSRSTATLFALRNGLLDPLAT

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53841; Mature: 53709

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAELLAAYSLATDLGLGQPMEHLLRSWRIAARLGTHVGLPDGEQAALFYVAMLSWVGC
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VADAPEVAATFGDDISFRSDSYDVDLGGMAAYRFFLGHAGAGASATARARVVATLLATGG
HCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
RRVMRGIQAHCLITSTLAERLGLDDAVSAAVRQFFARWDGQGVPPHVGGEDLSPWVRLFH
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
VGDITEVYHRNGGVEAAVRVARERRGRQFDPALADAFCEIAPEVLPALGEDDDLRGMLAD
HCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EPALRRCLSGPELDEALAALADFTDLRSPNRAGHSSGVAELAGSAASCLGLPAVDVAASR
CHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHCCCHHHHHHHH
RAGYLHDIGLHGVPSTILDKPGALSATEWERVRVSSYYTERVLAQPAPLARIGAIASYTN
CCCCHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ERMDGSGYHRGASGASIPMAGRVLAAACALRTLTEPRVGRPPKSVKDAATELRSEVRAGR
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
LDVDATDAVLSAAGAGGRRRVAGPAGLTQREVEVLVLIARGVATNEVAARLGVSRKTAAT
CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHCCCHHHHHH
HIERIYAKTGACSRSTATLFALRNGLLDPLAT
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TLAELLAAYSLATDLGLGQPMEHLLRSWRIAARLGTHVGLPDGEQAALFYVAMLSWVGC
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VADAPEVAATFGDDISFRSDSYDVDLGGMAAYRFFLGHAGAGASATARARVVATLLATGG
HCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
RRVMRGIQAHCLITSTLAERLGLDDAVSAAVRQFFARWDGQGVPPHVGGEDLSPWVRLFH
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
VGDITEVYHRNGGVEAAVRVARERRGRQFDPALADAFCEIAPEVLPALGEDDDLRGMLAD
HCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
EPALRRCLSGPELDEALAALADFTDLRSPNRAGHSSGVAELAGSAASCLGLPAVDVAASR
CHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHHHHCCCHHHHHHHH
RAGYLHDIGLHGVPSTILDKPGALSATEWERVRVSSYYTERVLAQPAPLARIGAIASYTN
CCCCHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ERMDGSGYHRGASGASIPMAGRVLAAACALRTLTEPRVGRPPKSVKDAATELRSEVRAGR
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
LDVDATDAVLSAAGAGGRRRVAGPAGLTQREVEVLVLIARGVATNEVAARLGVSRKTAAT
CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHCCCHHHHHH
HIERIYAKTGACSRSTATLFALRNGLLDPLAT
HHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA