| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717533
Identifier: 119717533
GI number: 119717533
Start: 3515972
End: 3516550
Strand: Reverse
Name: 119717533
Synonym: Noca_3309
Alternate gene names: NA
Gene position: 3516550-3515972 (Counterclockwise)
Preceding gene: 119717534
Following gene: 119717532
Centisome position: 70.53
GC content: 67.88
Gene sequence:
>579_bases TTGCCGACGCTCGATAGACGCCCTGGTATGCCTTCGCGCCGGACGCCTTGCCAGCGCACCCATCTGGTGACGCTCGCGAC GCCGCAAATCGGTGGATCGAGGCTGAGGCGATCTCGCCATTTGTCGGGTGTTCGCCCGACGACACCTCCCGTCGGCGCGC CTAGCGTCGTGGCACTCGATCCGCCGCGATGCAAGCCCGATGCAAGGGAGTCCGTCATGAGCAAAGCAGTCATCAGCCTC ACCACCGGCCTGGAGGATCCGGAGAAGGTCGTCGTCGCGTTCCTCGTCGCGGTCGGCGCTGCGGAGACCGGCCGCGAGAC CCTGATGTTCCTGACCAAGGAGGCGGTCCGCCTGGCGGTCCCGGGGGTCGCCGTCGGGGTCGCCTGCGACGGCTGCCCCT CGATCGAGGAGCTGGTCAAGCGGTACGACGCCGCGGGTGGCCGGTACTACGTCTGCCCGATCTGCGTGAATGCCCGCCGG ATCGATCCCGACGACCTCGTTCCTGGGGCGGAGATCAACGGCACCATCCCGATGTGGACCTGGATCGGCGACGAGCCGGC CACGACGTTCAGCTACTGA
Upstream 100 bases:
>100_bases GTTCGCCCTGCGCAACGGCCTCCTCGACCCGCTCGCGACCTGAGCCTCGATCCACCGATTTCCGCCTGCTGCGCGCCACC ATCTGGGCACGCTGGCTGCG
Downstream 100 bases:
>100_bases CATGGCCACCCCGACGACCCCGGCGACGCGCCGGCTCGACACGACCGAGCTCGAGGCGCGCGTCAAGGCGATGTACGAGG AGGTCGCGCTCACGCCGGAG
Product: peroxiredoxins-like
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MPTLDRRPGMPSRRTPCQRTHLVTLATPQIGGSRLRRSRHLSGVRPTTPPVGAPSVVALDPPRCKPDARESVMSKAVISL TTGLEDPEKVVVAFLVAVGAAETGRETLMFLTKEAVRLAVPGVAVGVACDGCPSIEELVKRYDAAGGRYYVCPICVNARR IDPDDLVPGAEINGTIPMWTWIGDEPATTFSY
Sequences:
>Translated_192_residues MPTLDRRPGMPSRRTPCQRTHLVTLATPQIGGSRLRRSRHLSGVRPTTPPVGAPSVVALDPPRCKPDARESVMSKAVISL TTGLEDPEKVVVAFLVAVGAAETGRETLMFLTKEAVRLAVPGVAVGVACDGCPSIEELVKRYDAAGGRYYVCPICVNARR IDPDDLVPGAEINGTIPMWTWIGDEPATTFSY >Mature_191_residues PTLDRRPGMPSRRTPCQRTHLVTLATPQIGGSRLRRSRHLSGVRPTTPPVGAPSVVALDPPRCKPDARESVMSKAVISLT TGLEDPEKVVVAFLVAVGAAETGRETLMFLTKEAVRLAVPGVAVGVACDGCPSIEELVKRYDAAGGRYYVCPICVNARRI DPDDLVPGAEINGTIPMWTWIGDEPATTFSY
Specific function: Unknown
COG id: COG2044
COG function: function code R; Predicted peroxiredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20607; Mature: 20476
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLDRRPGMPSRRTPCQRTHLVTLATPQIGGSRLRRSRHLSGVRPTTPPVGAPSVVALD CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEC PPRCKPDARESVMSKAVISLTTGLEDPEKVVVAFLVAVGAAETGRETLMFLTKEAVRLAV CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC PGVAVGVACDGCPSIEELVKRYDAAGGRYYVCPICVNARRIDPDDLVPGAEINGTIPMWT CCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCEECCHHHCCCCCCCCCCEEEEE WIGDEPATTFSY EECCCCCCCCCC >Mature Secondary Structure PTLDRRPGMPSRRTPCQRTHLVTLATPQIGGSRLRRSRHLSGVRPTTPPVGAPSVVALD CCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEC PPRCKPDARESVMSKAVISLTTGLEDPEKVVVAFLVAVGAAETGRETLMFLTKEAVRLAV CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC PGVAVGVACDGCPSIEELVKRYDAAGGRYYVCPICVNARRIDPDDLVPGAEINGTIPMWT CCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEECCEECCHHHCCCCCCCCCCEEEEE WIGDEPATTFSY EECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA