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The map label for this gene is gpsA [H]

Identifier: 119717517

GI number: 119717517

Start: 3499740

End: 3500747

Strand: Reverse

Name: gpsA [H]

Synonym: Noca_3293

Alternate gene names: 119717517

Gene position: 3500747-3499740 (Counterclockwise)

Preceding gene: 119717518

Following gene: 119717515

Centisome position: 70.21

GC content: 72.52

Gene sequence:

>1008_bases
ATGAGCGCCGGCAAGGTCGCGGTGTTCAGCGCCGGGTCGTGGGGCACCGCGTTCTCGATCGTGCTCGCCGACGCCGGCAA
CGACGTCACGCTCTGGGCCCGCCGCGAGGAGGTTGCCGCGGCGATCACCGAGCAGCGGGAGAACCCCGAGTACCTCCCCG
GGGTGGAGCTGCCGCCGCAGGTGTCCGCGACCCACGACGTCGAGAAGGCGCTGCACGGCGCCGACCTGGTCGTGCTCGCC
ACCCCGTCGCAGTCGCTGCGGGCCAACCTGAGCGAGTGGGCGCCCTACGTCGAGCCGAACGCGGTGCTCGTGTCGCTGAT
GAAGGGCGTCGAGCTCGGCACCCTCGAGCGGATGAGCCAGGTGATCGCGGAGGTGACCGGCGCCGGACCGGAGCGGATCG
CGGTGATCAGCGGGCCCAACCTCGCCAAGGAGATCGCCCGCCGCGAGCCAGCCGCGTCCGTGGTCGCCTGCGAGCACGAG
GAGGTCGCCCGGCAGCTGCAGGCACGGATCCACTCGCCGGCGTTCCGGCCGTACACGAGCGTCGACGTCCTCGGCTGCGA
GGTCGGGGGCGCCTACAAGAACGTCGTCGCGCTGTCGGTCGGCATGGCCGTCGGCCTGGGCTTCGGCGACAACACGACCG
CGTCGGTGATCACCCGCGGCCTGGCCGAGACCGCCCGGCTCGCCACCGCGCTCGGCGCGAACCCGATGACCCTGATGGGG
CTGGCCGGCCTCGGCGACCTGGTCGCCACCTGCTCCTCACCGCTGTCCCGCAACCGCACGTTCGGGGAGAAGCTTGGCCA
GGGGATGACGGCGGCCGAGATCTACGCCACCACCCGGCAGGTCGCCGAGGGCGCCAAGTCCTGCGCCTCGCTGCTCGCCC
TCGCCGAGCGCACCGGCGTGGACGCGCCCATCGCCCACCACGTCACCGCCGTGGTCGACGGCCGGATGACCGCGCAGGAG
ATGATGGACTCCTTCATCGCCCGCGACACCAAGGCCGAGACTGACTGA

Upstream 100 bases:

>100_bases
ACATGCGCAAGGCCGGCGTGCGCCAGATCGGCAACCCCAACAAGGAGCCGAAGGGGACCACGAGCCGCAGCCCCCGGAAG
CGGGCCCCCGAGGAGAGCGC

Downstream 100 bases:

>100_bases
GCAGCGGCGCGCGAGGAACGAGCGCGACGCGTGAGATGCCTGGGGCCTCAGCCTCGGCCCAGCATGTCGAGTGCCTGCCG
CAGGTCCTCCCACAGGTCGT

Product: glycerol-3-phosphate dehydrogenase (NAD(P)(+))

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSAGKVAVFSAGSWGTAFSIVLADAGNDVTLWARREEVAAAITEQRENPEYLPGVELPPQVSATHDVEKALHGADLVVLA
TPSQSLRANLSEWAPYVEPNAVLVSLMKGVELGTLERMSQVIAEVTGAGPERIAVISGPNLAKEIARREPAASVVACEHE
EVARQLQARIHSPAFRPYTSVDVLGCEVGGAYKNVVALSVGMAVGLGFGDNTTASVITRGLAETARLATALGANPMTLMG
LAGLGDLVATCSSPLSRNRTFGEKLGQGMTAAEIYATTRQVAEGAKSCASLLALAERTGVDAPIAHHVTAVVDGRMTAQE
MMDSFIARDTKAETD

Sequences:

>Translated_335_residues
MSAGKVAVFSAGSWGTAFSIVLADAGNDVTLWARREEVAAAITEQRENPEYLPGVELPPQVSATHDVEKALHGADLVVLA
TPSQSLRANLSEWAPYVEPNAVLVSLMKGVELGTLERMSQVIAEVTGAGPERIAVISGPNLAKEIARREPAASVVACEHE
EVARQLQARIHSPAFRPYTSVDVLGCEVGGAYKNVVALSVGMAVGLGFGDNTTASVITRGLAETARLATALGANPMTLMG
LAGLGDLVATCSSPLSRNRTFGEKLGQGMTAAEIYATTRQVAEGAKSCASLLALAERTGVDAPIAHHVTAVVDGRMTAQE
MMDSFIARDTKAETD
>Mature_334_residues
SAGKVAVFSAGSWGTAFSIVLADAGNDVTLWARREEVAAAITEQRENPEYLPGVELPPQVSATHDVEKALHGADLVVLAT
PSQSLRANLSEWAPYVEPNAVLVSLMKGVELGTLERMSQVIAEVTGAGPERIAVISGPNLAKEIARREPAASVVACEHEE
VARQLQARIHSPAFRPYTSVDVLGCEVGGAYKNVVALSVGMAVGLGFGDNTTASVITRGLAETARLATALGANPMTLMGL
AGLGDLVATCSSPLSRNRTFGEKLGQGMTAAEIYATTRQVAEGAKSCASLLALAERTGVDAPIAHHVTAVVDGRMTAQEM
MDSFIARDTKAETD

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=320, Percent_Identity=31.25, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI24307999, Length=340, Percent_Identity=27.9411764705882, Blast_Score=120, Evalue=3e-27,
Organism=Escherichia coli, GI1790037, Length=329, Percent_Identity=39.5136778115502, Blast_Score=217, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI32564399, Length=349, Percent_Identity=29.512893982808, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI193210136, Length=358, Percent_Identity=28.4916201117318, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI32564403, Length=358, Percent_Identity=28.4916201117318, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17507425, Length=348, Percent_Identity=27.2988505747126, Blast_Score=120, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI193210134, Length=346, Percent_Identity=26.5895953757225, Blast_Score=108, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6324513, Length=314, Percent_Identity=28.9808917197452, Blast_Score=119, Evalue=6e-28,
Organism=Saccharomyces cerevisiae, GI6320181, Length=351, Percent_Identity=27.6353276353276, Blast_Score=116, Evalue=6e-27,
Organism=Drosophila melanogaster, GI17136202, Length=341, Percent_Identity=27.8592375366569, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI17136204, Length=341, Percent_Identity=27.8592375366569, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI17136200, Length=341, Percent_Identity=27.5659824046921, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI22026922, Length=296, Percent_Identity=26.6891891891892, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI45551945, Length=287, Percent_Identity=26.8292682926829, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281362270, Length=287, Percent_Identity=26.8292682926829, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24648969, Length=247, Percent_Identity=27.5303643724696, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 34965; Mature: 34834

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGKVAVFSAGSWGTAFSIVLADAGNDVTLWARREEVAAAITEQRENPEYLPGVELPPQ
CCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCC
VSATHDVEKALHGADLVVLATPSQSLRANLSEWAPYVEPNAVLVSLMKGVELGTLERMSQ
CCCHHHHHHHHCCCCEEEEECCCHHHHCCHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHH
VIAEVTGAGPERIAVISGPNLAKEIARREPAASVVACEHEEVARQLQARIHSPAFRPYTS
HHHHHHCCCCCEEEEEECCHHHHHHHHCCCCHHHEEECHHHHHHHHHHHHCCCCCCCCCC
VDVLGCEVGGAYKNVVALSVGMAVGLGFGDNTTASVITRGLAETARLATALGANPMTLMG
EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LAGLGDLVATCSSPLSRNRTFGEKLGQGMTAAEIYATTRQVAEGAKSCASLLALAERTGV
HHHHHHHHHHHCCHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DAPIAHHVTAVVDGRMTAQEMMDSFIARDTKAETD
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SAGKVAVFSAGSWGTAFSIVLADAGNDVTLWARREEVAAAITEQRENPEYLPGVELPPQ
CCCCEEEEECCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCC
VSATHDVEKALHGADLVVLATPSQSLRANLSEWAPYVEPNAVLVSLMKGVELGTLERMSQ
CCCHHHHHHHHCCCCEEEEECCCHHHHCCHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHH
VIAEVTGAGPERIAVISGPNLAKEIARREPAASVVACEHEEVARQLQARIHSPAFRPYTS
HHHHHHCCCCCEEEEEECCHHHHHHHHCCCCHHHEEECHHHHHHHHHHHHCCCCCCCCCC
VDVLGCEVGGAYKNVVALSVGMAVGLGFGDNTTASVITRGLAETARLATALGANPMTLMG
EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LAGLGDLVATCSSPLSRNRTFGEKLGQGMTAAEIYATTRQVAEGAKSCASLLALAERTGV
HHHHHHHHHHHCCHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DAPIAHHVTAVVDGRMTAQEMMDSFIARDTKAETD
CCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA