| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is thiL [H]
Identifier: 119717512
GI number: 119717512
Start: 3495603
End: 3496553
Strand: Reverse
Name: thiL [H]
Synonym: Noca_3288
Alternate gene names: 119717512
Gene position: 3496553-3495603 (Counterclockwise)
Preceding gene: 119717515
Following gene: 119717510
Centisome position: 70.13
GC content: 76.55
Gene sequence:
>951_bases ATGTCGTTCCCCCCTGACGCGACGCTGGCCGATGCCGGCGAGTTCGGCCTGATCCGCGCACTCGTGGACCTGTTCCCCCA GGGGGAGCAGGTCCTGGTGGGCCCCGGCGACGACGCCGCGGTGCTCCGGGTGCGGACCGGCCACGTGGTCGTCTCGACCG ACCTGATGGTCGAGGGCCGCCACTTCCGGCGCGAGTGGGCCGCGGCCGCCGACGTCGGGCACCGCGCGGCCGCGCAGAAC CTCTCCGACGTCAACGCGATGGGCGGCCGAGCCACGTCGCTGACGATCGGACTGGCCGCGCCGGCGGACCTGCCCGCGCA GTGGGCCCTGGACTTCGCGCGTGGGTTCGCCGCCGAGTGCGACCTGGTGGGCGCCAGCGTCGTGGGCGGTGACGTGACCC GGGCCGACGAGATCGTGGTCGCCGTCACCGTGCTCGGCGCCTGCACCGAGTCGCCGGTGCTGCGCTCCGGCGCGCGGCCG GGCGACGTCCTCGCGATCTGCGGTCGCCAGGGCTGGGCCGCCGGCGGTCTCGCGGTGCTCGGGCGGGGCTTCCGCTCACC CCGGGTCCTCGTGGAGGCCTACCGTCGCCCGGAGCCGCCGTACGACGCCGGCCGGACCGCCGCCGAGGCCGGTGCCACGG CGATGATCGACGTCTCCGACGGGCTGCTCGCCGACGCGGGCCACATCGCGGCCGACTCCGGGGTGGCCATCGACGTGCAC GCGGCCGCGTTCGACGTCCCCGAGCCGCTGCACGCGGTCGGCGCGGCGATCGGGGCCGACCCGATCCAGTTCATCCTCGG CGGCGGCGACGACCACGCGCTGCTCGCCACCTTCCCGGACGTCGCGTCGGTCCCCGACGGCTGGTCGGTCATCGGCGCCG CCGCCGCGGGCGAGGGGGTCACCGTCGACGGCGCCGCGTACGACGGCCCCACCGGCTGGACGCACTTCTGA
Upstream 100 bases:
>100_bases GCTCTCCCTGGGATCTGGAACGGGTGATCTGGTTCTGCTGGCGTTGTGCCACGCCAACCTACCGCGCGGTACCCCTGCCC GCATCTGGTGGGATGGGTCC
Downstream 100 bases:
>100_bases GGCAAACGAAAAGGCCGCCACCCCGAGGGGTGGCGGCCTGCTCGCCAGCGATGGCGGCTTCGCCGCGACCGCTAGCGCGT GACCTTCCCGGCCTTCAGGC
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSFPPDATLADAGEFGLIRALVDLFPQGEQVLVGPGDDAAVLRVRTGHVVVSTDLMVEGRHFRREWAAAADVGHRAAAQN LSDVNAMGGRATSLTIGLAAPADLPAQWALDFARGFAAECDLVGASVVGGDVTRADEIVVAVTVLGACTESPVLRSGARP GDVLAICGRQGWAAGGLAVLGRGFRSPRVLVEAYRRPEPPYDAGRTAAEAGATAMIDVSDGLLADAGHIAADSGVAIDVH AAAFDVPEPLHAVGAAIGADPIQFILGGGDDHALLATFPDVASVPDGWSVIGAAAAGEGVTVDGAAYDGPTGWTHF
Sequences:
>Translated_316_residues MSFPPDATLADAGEFGLIRALVDLFPQGEQVLVGPGDDAAVLRVRTGHVVVSTDLMVEGRHFRREWAAAADVGHRAAAQN LSDVNAMGGRATSLTIGLAAPADLPAQWALDFARGFAAECDLVGASVVGGDVTRADEIVVAVTVLGACTESPVLRSGARP GDVLAICGRQGWAAGGLAVLGRGFRSPRVLVEAYRRPEPPYDAGRTAAEAGATAMIDVSDGLLADAGHIAADSGVAIDVH AAAFDVPEPLHAVGAAIGADPIQFILGGGDDHALLATFPDVASVPDGWSVIGAAAAGEGVTVDGAAYDGPTGWTHF >Mature_315_residues SFPPDATLADAGEFGLIRALVDLFPQGEQVLVGPGDDAAVLRVRTGHVVVSTDLMVEGRHFRREWAAAADVGHRAAAQNL SDVNAMGGRATSLTIGLAAPADLPAQWALDFARGFAAECDLVGASVVGGDVTRADEIVVAVTVLGACTESPVLRSGARPG DVLAICGRQGWAAGGLAVLGRGFRSPRVLVEAYRRPEPPYDAGRTAAEAGATAMIDVSDGLLADAGHIAADSGVAIDVHA AAFDVPEPLHAVGAAIGADPIQFILGGGDDHALLATFPDVASVPDGWSVIGAAAAGEGVTVDGAAYDGPTGWTHF
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=328, Percent_Identity=30.7926829268293, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 31982; Mature: 31851
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPPDATLADAGEFGLIRALVDLFPQGEQVLVGPGDDAAVLRVRTGHVVVSTDLMVEGR CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCEEEEEEEEEECCH HFRREWAAAADVGHRAAAQNLSDVNAMGGRATSLTIGLAAPADLPAQWALDFARGFAAEC HHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCC DLVGASVVGGDVTRADEIVVAVTVLGACTESPVLRSGARPGDVLAICGRQGWAAGGLAVL CEECCEEECCCCCCCCCEEEEEEEHHCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHH GRGFRSPRVLVEAYRRPEPPYDAGRTAAEAGATAMIDVSDGLLADAGHIAADSGVAIDVH CCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEECCCCCEECCCCEECCCCCEEEEE AAAFDVPEPLHAVGAAIGADPIQFILGGGDDHALLATFPDVASVPDGWSVIGAAAAGEGV HHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHCCCCCHHEEEHHCCCCCE TVDGAAYDGPTGWTHF EECCCCCCCCCCCCCC >Mature Secondary Structure SFPPDATLADAGEFGLIRALVDLFPQGEQVLVGPGDDAAVLRVRTGHVVVSTDLMVEGR CCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCEEEEEEEEEECCH HFRREWAAAADVGHRAAAQNLSDVNAMGGRATSLTIGLAAPADLPAQWALDFARGFAAEC HHHHHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCCC DLVGASVVGGDVTRADEIVVAVTVLGACTESPVLRSGARPGDVLAICGRQGWAAGGLAVL CEECCEEECCCCCCCCCEEEEEEEHHCCCCCCHHHCCCCCCCEEEEECCCCCCCCCHHHH GRGFRSPRVLVEAYRRPEPPYDAGRTAAEAGATAMIDVSDGLLADAGHIAADSGVAIDVH CCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEECCCCCEECCCCEECCCCCEEEEE AAAFDVPEPLHAVGAAIGADPIQFILGGGDDHALLATFPDVASVPDGWSVIGAAAAGEGV HHCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHCCCCCHHEEEHHCCCCCE TVDGAAYDGPTGWTHF EECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377; 8419296 [H]