Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717502

Identifier: 119717502

GI number: 119717502

Start: 3484532

End: 3485779

Strand: Reverse

Name: 119717502

Synonym: Noca_3278

Alternate gene names: NA

Gene position: 3485779-3484532 (Counterclockwise)

Preceding gene: 119717503

Following gene: 119717501

Centisome position: 69.91

GC content: 72.28

Gene sequence:

>1248_bases
GTGACCAGCCTGGCCGAGATCGTCGCACCCCGCCGGCTCGGCACCGGGTTCCGGTGGCTGCTCGCGTCGTCCTGGGTGAG
CAACCTCGGCGACGGACTGGCCCTCGCCGCCGGGCCCCTGCTGGTGGCGTCCCAGACCCACGACCCGTTCCTCGTCGCGC
TCGCGGCGCTGCTCCAGTGGCTGCCGCCGCTGCTGTTCGGGCTGTACGCCGGGGCGCTCGCCGACCGCCTCGACCGCCGG
CTGATCGTGGTGACGGTCGACCTGTTGCGCGCCGTCGTCCTGGTGCTCCTCACGCTCGCGATCGCGACCGACCTGGTCAC
GATCACGCTGGTGCTCGTCACGATGTTCCTGCTCGGCACCGCGGAGGTGTTCGCCGACAACACCGCGTCGACGCTGCTGC
CGATGCTGGTGCACCGCGACGACCTCGGCGTCGCCAATGCCCGGCTGACCACCGGCTTCATCACCGTCAACCAGCTCGCC
GGCCCGCCGATCGGCGCGGCCCTGTTCGCCGCCGGGCACGCCGTGCCGTTCGTCGCGCAGGCGGTGGTGGTGGCGCTCGG
CGCGCTGCTCGCCGCGCAGATCGCGCTGCCGCCGCACGGGCGGTCCCGCGACGAGCGGCCGCAGCTGCGCCAGGACGTGG
TCGAGGCGTTCCGCTGGGTGCTGCACAACGCCGCCGTACGCACCCTGGTGCTGACGATCTTCGTCTTCAACATCACCTTC
GGCGCGGCCTGGTCGATCCTGGTCCTCTACGCCACCCAGCGGCTCGGGATGGGGGAAGTCGGCTTCGGGCTGCTGACCAC
GGTGTCAGCGATCGGCGGCCTGATCGGAACCCTCGCCTACGGCTGGATCACCCGCCGGGTCAGCCTCGCCAACATCATGC
GAGCGGGCCTGGTCTTCGAGACCTTCACCCACCTGGCGCTCGCCCTCACGACGCGGCCGGCGGTGGCGATGGCGATCTTC
TTCGTCTTCGGCGCCCACGCCTTCATCTGGGGCACGACGTCGACCACCGTCCGGCAGCGCGCCGTGCCCGGCGAGCTGCA
GGGCCGGGTCGGCAGCGTCAACCTGGTCGGCGTGTTCGGCGGCCTGGTCATCGGCTCCGGCATCGGTGGTGGTCTCGCCC
AGCACTGGGGCGTGACCGCGCCGTTCTGGTTCGCGTTCGCCGGCTCCGCGGTCTTCGTCGTGCTGATCTGGGGCCAGCTG
GTCCACATCGCGCACGCCGACGAGCAGGGGCAGCCGGCGGGGGCCTGA

Upstream 100 bases:

>100_bases
GGCCGGCCTGCTCGGGCTGGCGCTGGCCCTGGCGCTCGCCGTACGCCGACGCGCAAATCGGATGCCCGGGGCGACCCTCG
GAGGCTAGTGTCTGGCCCTT

Downstream 100 bases:

>100_bases
GGTGGTTGCATGAACCCATGCACGCGTTGACCGACCTGCTCGAGGCGCTCCCGGCCGGCGTCGTCGTGACCGACGGCGAC
GCCATGGAGAAGTACCGCTT

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Antibiotic Transporter; Facilitator Superfamily Transporter; Integral Membrane Efflux Protein; Inner Membrane Protein; MFS Transporter; Antibiotic Efflux Protein; Facilitator Family Transporter; MFS Superfamily Transporter

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MTSLAEIVAPRRLGTGFRWLLASSWVSNLGDGLALAAGPLLVASQTHDPFLVALAALLQWLPPLLFGLYAGALADRLDRR
LIVVTVDLLRAVVLVLLTLAIATDLVTITLVLVTMFLLGTAEVFADNTASTLLPMLVHRDDLGVANARLTTGFITVNQLA
GPPIGAALFAAGHAVPFVAQAVVVALGALLAAQIALPPHGRSRDERPQLRQDVVEAFRWVLHNAAVRTLVLTIFVFNITF
GAAWSILVLYATQRLGMGEVGFGLLTTVSAIGGLIGTLAYGWITRRVSLANIMRAGLVFETFTHLALALTTRPAVAMAIF
FVFGAHAFIWGTTSTTVRQRAVPGELQGRVGSVNLVGVFGGLVIGSGIGGGLAQHWGVTAPFWFAFAGSAVFVVLIWGQL
VHIAHADEQGQPAGA

Sequences:

>Translated_415_residues
MTSLAEIVAPRRLGTGFRWLLASSWVSNLGDGLALAAGPLLVASQTHDPFLVALAALLQWLPPLLFGLYAGALADRLDRR
LIVVTVDLLRAVVLVLLTLAIATDLVTITLVLVTMFLLGTAEVFADNTASTLLPMLVHRDDLGVANARLTTGFITVNQLA
GPPIGAALFAAGHAVPFVAQAVVVALGALLAAQIALPPHGRSRDERPQLRQDVVEAFRWVLHNAAVRTLVLTIFVFNITF
GAAWSILVLYATQRLGMGEVGFGLLTTVSAIGGLIGTLAYGWITRRVSLANIMRAGLVFETFTHLALALTTRPAVAMAIF
FVFGAHAFIWGTTSTTVRQRAVPGELQGRVGSVNLVGVFGGLVIGSGIGGGLAQHWGVTAPFWFAFAGSAVFVVLIWGQL
VHIAHADEQGQPAGA
>Mature_414_residues
TSLAEIVAPRRLGTGFRWLLASSWVSNLGDGLALAAGPLLVASQTHDPFLVALAALLQWLPPLLFGLYAGALADRLDRRL
IVVTVDLLRAVVLVLLTLAIATDLVTITLVLVTMFLLGTAEVFADNTASTLLPMLVHRDDLGVANARLTTGFITVNQLAG
PPIGAALFAAGHAVPFVAQAVVVALGALLAAQIALPPHGRSRDERPQLRQDVVEAFRWVLHNAAVRTLVLTIFVFNITFG
AAWSILVLYATQRLGMGEVGFGLLTTVSAIGGLIGTLAYGWITRRVSLANIMRAGLVFETFTHLALALTTRPAVAMAIFF
VFGAHAFIWGTTSTTVRQRAVPGELQGRVGSVNLVGVFGGLVIGSGIGGGLAQHWGVTAPFWFAFAGSAVFVVLIWGQLV
HIAHADEQGQPAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43736; Mature: 43605

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLAEIVAPRRLGTGFRWLLASSWVSNLGDGLALAAGPLLVASQTHDPFLVALAALLQW
CCCHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHH
LPPLLFGLYAGALADRLDRRLIVVTVDLLRAVVLVLLTLAIATDLVTITLVLVTMFLLGT
HHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVFADNTASTLLPMLVHRDDLGVANARLTTGFITVNQLAGPPIGAALFAAGHAVPFVAQ
HHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEHEEEEHHHCCCCHHHHHHHHCCHHHHHHH
AVVVALGALLAAQIALPPHGRSRDERPQLRQDVVEAFRWVLHNAAVRTLVLTIFVFNITF
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAAWSILVLYATQRLGMGEVGFGLLTTVSAIGGLIGTLAYGWITRRVSLANIMRAGLVFE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFTHLALALTTRPAVAMAIFFVFGAHAFIWGTTSTTVRQRAVPGELQGRVGSVNLVGVFG
HHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCHHCCCCCCEEHHHHHH
GLVIGSGIGGGLAQHWGVTAPFWFAFAGSAVFVVLIWGQLVHIAHADEQGQPAGA
HHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSLAEIVAPRRLGTGFRWLLASSWVSNLGDGLALAAGPLLVASQTHDPFLVALAALLQW
CCHHHHHCCHHCCCCHHHHHHHHHHHHCCCCHHHHCCCEEEECCCCCHHHHHHHHHHHH
LPPLLFGLYAGALADRLDRRLIVVTVDLLRAVVLVLLTLAIATDLVTITLVLVTMFLLGT
HHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVFADNTASTLLPMLVHRDDLGVANARLTTGFITVNQLAGPPIGAALFAAGHAVPFVAQ
HHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEHEEEEHHHCCCCHHHHHHHHCCHHHHHHH
AVVVALGALLAAQIALPPHGRSRDERPQLRQDVVEAFRWVLHNAAVRTLVLTIFVFNITF
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAAWSILVLYATQRLGMGEVGFGLLTTVSAIGGLIGTLAYGWITRRVSLANIMRAGLVFE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFTHLALALTTRPAVAMAIFFVFGAHAFIWGTTSTTVRQRAVPGELQGRVGSVNLVGVFG
HHHHHHHHHHCCHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCHHCCCCCCEEHHHHHH
GLVIGSGIGGGLAQHWGVTAPFWFAFAGSAVFVVLIWGQLVHIAHADEQGQPAGA
HHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA