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The map label for this gene is ftsY [H]

Identifier: 119717494

GI number: 119717494

Start: 3473350

End: 3474480

Strand: Reverse

Name: ftsY [H]

Synonym: Noca_3270

Alternate gene names: 119717494

Gene position: 3474480-3473350 (Counterclockwise)

Preceding gene: 119717495

Following gene: 119717493

Centisome position: 69.69

GC content: 73.65

Gene sequence:

>1131_bases
ATGGACACCGTGGTCATCCTGATCCTCGCCATCGCCGTCGTCGCGATCGGACTGGTGGCGACGGTCACCGGGCTGGTGGT
GAGCGGCCGGCGCAAGCCCGAGCCGCTCCGGGGCACCAGCACCGACGTACTCGCTCCTCCGGAGGAGGCCGAGGCCCCCG
CACAGGCCCCGGCCGAGGCGCCCGCGGGCGCGACCGCCCCGGTCCTCGAGAAGCCGGAGGGGACCGCGTCCCGCCTGGTG
CGGCTGCGCCAGCGGCTGGCCGGCTCGCAGGGCGGGCTCGGCCGCGGCCTCCTGGCACTGCTGTCGCGGGACCGGCTCGA
CGAGGACACCTGGGAGTCGATCGAGGACACCCTGCTCACCGCCGACGTGGGCGTCGGCCCGACCCAGGAGCTGGTCGAGC
GGCTGCGCACCCGGCTGCGCGTGGAGGGCGCCCCGGAGGACGCCCGGGGGGTGCTGCGCGAGGAGCTGCTGGCGCTGGTC
GACCCGGACATGGACCGGCGACTGCACGTCAGCGGCCTCGACGGGATGCCCGGCGTGGTGCTGGTGGTCGGCGTCAACGG
CTCCGGCAAGACCACCACCGTCGGCAAGATCTCGCGGATCCTCGTCGCCGAGGACCGCAGTGTGGTGCTCGGTGCCGCCG
ACACGTTCCGGGCCGCCGCGGTCGAGCAGCTCGCGACGTGGGGCGAGCGGGTCGGCGTCGACGTCGTGCGCGGGCCCGAG
GGCACCGACCCCGCCAGCGTGGCCTTCGAGGCCGTCAAGGAGGGCGTCGAGACCAAGGCGGACACGGTGATCGTCGACAC
CGCTGGCCGGCTGCAGAACAAGGCCGGCCTGATGGACGAGCTCGGCAAGGTCAAGCGGGTGATCGAGAAGCAGGCGCCGG
TCACCGAGGTGCTGCTCGTCCTCGACGCGACGACCGGCCAGAACGGGCTGATCCAGGCGCGGGTCTTCAGCGAGGTCGTC
AACGTGACCGGCATCGTGCTGACCAAGCTGGACGGCTCAGCGAAGGGCGGCATCGTCGTCCAGGTGCAGCGCGAGCTCGG
CGTACCCGTCAAGCTGGTCGGCCTCGGCGAGGGCGCCGACGACCTCGCACCCTTCGACGCCGGCGCCTTCGTCGACGCGC
TGCTGGGCTGA

Upstream 100 bases:

>100_bases
GGACTCGTTCGAGGAGGCGCCGGTGGCGGCCGTCGACGAGCGGCGGCACCGCACCTCCTGACCGACCCGCCCTGCTCGGC
CCTCTGATTGGATTGGCGCC

Downstream 100 bases:

>100_bases
TCCGGGCCGGTGGCAACGACGTTGAGGTTCCTGTAACACCGAAGTAACACCCGGCTGGGACTCGTTGCACCGACGCAACA
TGGCGCGGCGTACGTCGAAA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDTVVILILAIAVVAIGLVATVTGLVVSGRRKPEPLRGTSTDVLAPPEEAEAPAQAPAEAPAGATAPVLEKPEGTASRLV
RLRQRLAGSQGGLGRGLLALLSRDRLDEDTWESIEDTLLTADVGVGPTQELVERLRTRLRVEGAPEDARGVLREELLALV
DPDMDRRLHVSGLDGMPGVVLVVGVNGSGKTTTVGKISRILVAEDRSVVLGAADTFRAAAVEQLATWGERVGVDVVRGPE
GTDPASVAFEAVKEGVETKADTVIVDTAGRLQNKAGLMDELGKVKRVIEKQAPVTEVLLVLDATTGQNGLIQARVFSEVV
NVTGIVLTKLDGSAKGGIVVQVQRELGVPVKLVGLGEGADDLAPFDAGAFVDALLG

Sequences:

>Translated_376_residues
MDTVVILILAIAVVAIGLVATVTGLVVSGRRKPEPLRGTSTDVLAPPEEAEAPAQAPAEAPAGATAPVLEKPEGTASRLV
RLRQRLAGSQGGLGRGLLALLSRDRLDEDTWESIEDTLLTADVGVGPTQELVERLRTRLRVEGAPEDARGVLREELLALV
DPDMDRRLHVSGLDGMPGVVLVVGVNGSGKTTTVGKISRILVAEDRSVVLGAADTFRAAAVEQLATWGERVGVDVVRGPE
GTDPASVAFEAVKEGVETKADTVIVDTAGRLQNKAGLMDELGKVKRVIEKQAPVTEVLLVLDATTGQNGLIQARVFSEVV
NVTGIVLTKLDGSAKGGIVVQVQRELGVPVKLVGLGEGADDLAPFDAGAFVDALLG
>Mature_376_residues
MDTVVILILAIAVVAIGLVATVTGLVVSGRRKPEPLRGTSTDVLAPPEEAEAPAQAPAEAPAGATAPVLEKPEGTASRLV
RLRQRLAGSQGGLGRGLLALLSRDRLDEDTWESIEDTLLTADVGVGPTQELVERLRTRLRVEGAPEDARGVLREELLALV
DPDMDRRLHVSGLDGMPGVVLVVGVNGSGKTTTVGKISRILVAEDRSVVLGAADTFRAAAVEQLATWGERVGVDVVRGPE
GTDPASVAFEAVKEGVETKADTVIVDTAGRLQNKAGLMDELGKVKRVIEKQAPVTEVLLVLDATTGQNGLIQARVFSEVV
NVTGIVLTKLDGSAKGGIVVQVQRELGVPVKLVGLGEGADDLAPFDAGAFVDALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=265, Percent_Identity=31.6981132075472, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI226371618, Length=223, Percent_Identity=33.1838565022422, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI295424842, Length=323, Percent_Identity=31.8885448916409, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI23308697, Length=323, Percent_Identity=31.8885448916409, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI89061728, Length=134, Percent_Identity=34.3283582089552, Blast_Score=83, Evalue=4e-16,
Organism=Escherichia coli, GI1789874, Length=344, Percent_Identity=42.7325581395349, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1788963, Length=295, Percent_Identity=35.2542372881356, Blast_Score=149, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI17539958, Length=265, Percent_Identity=32.4528301886792, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=294, Percent_Identity=32.6530612244898, Blast_Score=114, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=269, Percent_Identity=30.4832713754647, Blast_Score=125, Evalue=9e-30,
Organism=Saccharomyces cerevisiae, GI6320498, Length=229, Percent_Identity=28.3842794759825, Blast_Score=83, Evalue=6e-17,
Organism=Drosophila melanogaster, GI17647949, Length=269, Percent_Identity=32.7137546468402, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24641198, Length=300, Percent_Identity=29.3333333333333, Blast_Score=107, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 39094; Mature: 39094

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVVILILAIAVVAIGLVATVTGLVVSGRRKPEPLRGTSTDVLAPPEEAEAPAQAPAEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
PAGATAPVLEKPEGTASRLVRLRQRLAGSQGGLGRGLLALLSRDRLDEDTWESIEDTLLT
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEE
ADVGVGPTQELVERLRTRLRVEGAPEDARGVLREELLALVDPDMDRRLHVSGLDGMPGVV
ECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEE
LVVGVNGSGKTTTVGKISRILVAEDRSVVLGAADTFRAAAVEQLATWGERVGVDVVRGPE
EEEEECCCCCEEEHHHHHEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCC
GTDPASVAFEAVKEGVETKADTVIVDTAGRLQNKAGLMDELGKVKRVIEKQAPVTEVLLV
CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHCCCHHHEEEE
LDATTGQNGLIQARVFSEVVNVTGIVLTKLDGSAKGGIVVQVQRELGVPVKLVGLGEGAD
EECCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEHHHHCCCEEEEECCCCCH
DLAPFDAGAFVDALLG
HCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDTVVILILAIAVVAIGLVATVTGLVVSGRRKPEPLRGTSTDVLAPPEEAEAPAQAPAEA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
PAGATAPVLEKPEGTASRLVRLRQRLAGSQGGLGRGLLALLSRDRLDEDTWESIEDTLLT
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEE
ADVGVGPTQELVERLRTRLRVEGAPEDARGVLREELLALVDPDMDRRLHVSGLDGMPGVV
ECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEE
LVVGVNGSGKTTTVGKISRILVAEDRSVVLGAADTFRAAAVEQLATWGERVGVDVVRGPE
EEEEECCCCCEEEHHHHHEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCC
GTDPASVAFEAVKEGVETKADTVIVDTAGRLQNKAGLMDELGKVKRVIEKQAPVTEVLLV
CCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCHHHHHHHHHHHHHHCCCHHHEEEE
LDATTGQNGLIQARVFSEVVNVTGIVLTKLDGSAKGGIVVQVQRELGVPVKLVGLGEGAD
EECCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEHHHHCCCEEEEECCCCCH
DLAPFDAGAFVDALLG
HCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]