| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119717067
Identifier: 119717067
GI number: 119717067
Start: 3012759
End: 3013775
Strand: Reverse
Name: 119717067
Synonym: Noca_2843
Alternate gene names: NA
Gene position: 3013775-3012759 (Counterclockwise)
Preceding gene: 119717068
Following gene: 119717066
Centisome position: 60.45
GC content: 74.43
Gene sequence:
>1017_bases GTGAGCCGGTTGCAGCGCCTCGTGGTCGACCTCGAGCGCGCCTGGGACGCGGCCCGGCTGCGGCGCAAGGGTTCGGGGCC GCCGGCGGACTTCCGGATCGAGACCTACCTGGGGCACGGCGGTCCCGAGGGGGTGGTCGTCCGCGGCCGGGTGCTCGACG ACCCACCACCGACCGAGGCGGTGGAGGGGGAGGGCGTCGGTGCCGCCGTACGACGGAGCCTGCGGCAGTTCGTCACCGCC GAGCTGCCGGGGGTCCCGCTGCGGGTGCGCGTCGGGGACTCCGTCGTGGAGGCCGTCACGGACGCCGAGGGCTACTTCGT GGCCCGTCTCGATCCCACGACGCTGGCCGGACCCTGGGCGGACGGCCGGGTCGAGCTGGCGCGGGAGCACCGCGGCCTCA CCGACCCGCACCCGACCCGCGTGCGGGTCCGGGTGCCCGGCGCGGACGCGGCGTTCGGGGTGATCTCGGACGTCGACGAC ACGATCATCGAGACCGGCGTCCAGCGGGTCGGGCTGATGCTGCGCCAGACGTTCACCGGATCGGCCCTGACGCGCACGCC GTTCCCGGGCGCCGCCGAGCTCTACCGCGACCTCGAGGCGGGGTCGAACCCGTTCTTCTACGTCTCCTCCAGCCCGTGGA ATCTGCACGCGTTCTTGCTGGCCTTCCTCGAGCACCGCGACTTCCCGCTCGGGCCGCTGCTGCTGCGCGACCTGATCGGG AGTCGCGCGGGCCGGGCCCGCAAGCACGAGCGGATCGAGGAGGTGCTCGCGCTGCACCCCGGCTTGCGGTTCGTGCTGAT CGGCGACTCCGGCGAGCGGGACCCACAGATCTACGCCGACGTCGTCGCCGCCCACCCCGGTCGGATCCTGGCCGTCTACA TCCGCGAGGTCCGGCTCGACCCGGGCGACGGCCGGGTCGAGCGGGTCAGCGACTCCTGGGCGCACGACGTGCCGTTCGTG CTCGCCGCCGACAGCGGGGCGGTACGCCGCCACGCCGCCTCGATCGGGCTGCTGTGA
Upstream 100 bases:
>100_bases CGTCGAGCACAGCGGCCGCGCCGTGGTCCTCGGCCTGCCCTCGAACGTCCGGGACTACCTCGCCGGCTGATCCACCCGCG GCGCCGCCTACGGTGGCCCC
Downstream 100 bases:
>100_bases GCGGGTCGCGCCTGCTGCTGGCCGTCGACGCCCCGTCGCTGCTGCACCGCAAACCGCAACCACCACGCGCGGGTCCAGTC GGGGCTGCTGGACCACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSRLQRLVVDLERAWDAARLRRKGSGPPADFRIETYLGHGGPEGVVVRGRVLDDPPPTEAVEGEGVGAAVRRSLRQFVTA ELPGVPLRVRVGDSVVEAVTDAEGYFVARLDPTTLAGPWADGRVELAREHRGLTDPHPTRVRVRVPGADAAFGVISDVDD TIIETGVQRVGLMLRQTFTGSALTRTPFPGAAELYRDLEAGSNPFFYVSSSPWNLHAFLLAFLEHRDFPLGPLLLRDLIG SRAGRARKHERIEEVLALHPGLRFVLIGDSGERDPQIYADVVAAHPGRILAVYIREVRLDPGDGRVERVSDSWAHDVPFV LAADSGAVRRHAASIGLL
Sequences:
>Translated_338_residues MSRLQRLVVDLERAWDAARLRRKGSGPPADFRIETYLGHGGPEGVVVRGRVLDDPPPTEAVEGEGVGAAVRRSLRQFVTA ELPGVPLRVRVGDSVVEAVTDAEGYFVARLDPTTLAGPWADGRVELAREHRGLTDPHPTRVRVRVPGADAAFGVISDVDD TIIETGVQRVGLMLRQTFTGSALTRTPFPGAAELYRDLEAGSNPFFYVSSSPWNLHAFLLAFLEHRDFPLGPLLLRDLIG SRAGRARKHERIEEVLALHPGLRFVLIGDSGERDPQIYADVVAAHPGRILAVYIREVRLDPGDGRVERVSDSWAHDVPFV LAADSGAVRRHAASIGLL >Mature_337_residues SRLQRLVVDLERAWDAARLRRKGSGPPADFRIETYLGHGGPEGVVVRGRVLDDPPPTEAVEGEGVGAAVRRSLRQFVTAE LPGVPLRVRVGDSVVEAVTDAEGYFVARLDPTTLAGPWADGRVELAREHRGLTDPHPTRVRVRVPGADAAFGVISDVDDT IIETGVQRVGLMLRQTFTGSALTRTPFPGAAELYRDLEAGSNPFFYVSSSPWNLHAFLLAFLEHRDFPLGPLLLRDLIGS RAGRARKHERIEEVLALHPGLRFVLIGDSGERDPQIYADVVAAHPGRILAVYIREVRLDPGDGRVERVSDSWAHDVPFVL AADSGAVRRHAASIGLL
Specific function: Unknown
COG id: COG4850
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324235, Length=151, Percent_Identity=34.4370860927152, Blast_Score=77, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36875; Mature: 36744
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLQRLVVDLERAWDAARLRRKGSGPPADFRIETYLGHGGPEGVVVRGRVLDDPPPTEA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC VEGEGVGAAVRRSLRQFVTAELPGVPLRVRVGDSVVEAVTDAEGYFVARLDPTTLAGPWA CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCEEEEEECCCCCCCCCC DGRVELAREHRGLTDPHPTRVRVRVPGADAAFGVISDVDDTIIETGVQRVGLMLRQTFTG CCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC SALTRTPFPGAAELYRDLEAGSNPFFYVSSSPWNLHAFLLAFLEHRDFPLGPLLLRDLIG CCEECCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH SRAGRARKHERIEEVLALHPGLRFVLIGDSGERDPQIYADVVAAHPGRILAVYIREVRLD HHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEHHCCC PGDGRVERVSDSWAHDVPFVLAADSGAVRRHAASIGLL CCCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHCCC >Mature Secondary Structure SRLQRLVVDLERAWDAARLRRKGSGPPADFRIETYLGHGGPEGVVVRGRVLDDPPPTEA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCC VEGEGVGAAVRRSLRQFVTAELPGVPLRVRVGDSVVEAVTDAEGYFVARLDPTTLAGPWA CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCEEEEEECCCCCCCCCC DGRVELAREHRGLTDPHPTRVRVRVPGADAAFGVISDVDDTIIETGVQRVGLMLRQTFTG CCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC SALTRTPFPGAAELYRDLEAGSNPFFYVSSSPWNLHAFLLAFLEHRDFPLGPLLLRDLIG CCEECCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH SRAGRARKHERIEEVLALHPGLRFVLIGDSGERDPQIYADVVAAHPGRILAVYIREVRLD HHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEHHCCC PGDGRVERVSDSWAHDVPFVLAADSGAVRRHAASIGLL CCCCCCEECCCCCCCCCCEEEECCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA