BacMap

Definition	Nocardioides sp. JS614 chromosome, complete genome.
Accession	NC_008699
Length	4,985,871

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The map label for this gene is fabG3 [H]

Identifier: 119717037

GI number: 119717037

Start: 2983910

End: 2984665

Strand: Reverse

Name: fabG3 [H]

Synonym: Noca_2813

Alternate gene names: 119717037

Gene position: 2984665-2983910 (Counterclockwise)

Preceding gene: 119717038

Following gene: 119717036

Centisome position: 59.86

GC content: 71.56

Gene sequence:

>756_bases
ATGAACCGGCTGCAGGGGAAGGTCGCGATCGTGACCGGCGGTGCGCAGGGCCAGGGGGCCGGCATCAGCCGCGCCTTCGT
GGCCGAGGGCGCCCGCGTGGTGATCGCCGACATCGCCAAGGAGCAGGGCCAGGAGCTCGCCGCCGAGCTGGGCGACACCG
CCCACTTCATCGACCACGACGTCAGCGACCAGGCCTCCTGGACCGCGCTGGTCGAGGACACCGGCCAGCGGTTCGGCCCG
GTCAACGTGCTGGCCAACAACGCCGGCATCCTGCGGTTCGGCGAGATCGAGAAGATGCCGGTCGACGAGGTCGAGCTGCT
CTGGCGGGTCAACCAGCTCGGCTGCTTCCTCGGCATGAACGCCGTCAGCCGCACGATGCGGGAGCACGGCGGCGGCTCGA
TCATCAACGCCTCCTCGGTCGAGGGCCTGGCCGGCATGGCCGGCTGCACGGCGTACGCCGCGACCAAGTGGGCGATCCGC
GGGATGACCAAGTGCGCCGCGATGGAGCTCGGCCCCCAGGGCATCCGCGTCAACTCGGTGCACCCCGGCATGATCGACAC
CCCGATGACCCGCGTGCACGGCGGCGACGCCGCGATGGAGTACGGCGCCGCCAAGGTCCCGCTGCGCCGGGTCGGGTACC
CGGACGACATCGCGCCGCTGTACGTCTACCTCGCCAGCGACGAGTCGGCGTACGTCAACGGCGCCGAGATCGCGATCGAC
GGCGGCGTCACGGCGACCCACGCCTTCGGCGGCTGA

Upstream 100 bases:

>100_bases
GTGGCTACTTCGAGGACCGGGACCCCTCCGTCGGCTTCGCCGCCGACTCGATCATGCGCCTCTCGCTGGCCGAGCCCGTC
GAGGCCCAGGAGGTGCGGGC

Downstream 100 bases:

>100_bases
GGCGTGGCCAACCAGCGCGCCCAGGTCGTGATGAGTCACGACGAGCAGGTCGAGTTCCTCCACCAGCAGCGCTCGTGCAC
GCTCGGCACGTTCGGTCCAC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNRLQGKVAIVTGGAQGQGAGISRAFVAEGARVVIADIAKEQGQELAAELGDTAHFIDHDVSDQASWTALVEDTGQRFGP
VNVLANNAGILRFGEIEKMPVDEVELLWRVNQLGCFLGMNAVSRTMREHGGGSIINASSVEGLAGMAGCTAYAATKWAIR
GMTKCAAMELGPQGIRVNSVHPGMIDTPMTRVHGGDAAMEYGAAKVPLRRVGYPDDIAPLYVYLASDESAYVNGAEIAID
GGVTATHAFGG

Sequences:

>Translated_251_residues
MNRLQGKVAIVTGGAQGQGAGISRAFVAEGARVVIADIAKEQGQELAAELGDTAHFIDHDVSDQASWTALVEDTGQRFGP
VNVLANNAGILRFGEIEKMPVDEVELLWRVNQLGCFLGMNAVSRTMREHGGGSIINASSVEGLAGMAGCTAYAATKWAIR
GMTKCAAMELGPQGIRVNSVHPGMIDTPMTRVHGGDAAMEYGAAKVPLRRVGYPDDIAPLYVYLASDESAYVNGAEIAID
GGVTATHAFGG
>Mature_251_residues
MNRLQGKVAIVTGGAQGQGAGISRAFVAEGARVVIADIAKEQGQELAAELGDTAHFIDHDVSDQASWTALVEDTGQRFGP
VNVLANNAGILRFGEIEKMPVDEVELLWRVNQLGCFLGMNAVSRTMREHGGGSIINASSVEGLAGMAGCTAYAATKWAIR
GMTKCAAMELGPQGIRVNSVHPGMIDTPMTRVHGGDAAMEYGAAKVPLRRVGYPDDIAPLYVYLASDESAYVNGAEIAID
GGVTATHAFGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=255, Percent_Identity=34.9019607843137, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI40254992, Length=237, Percent_Identity=32.0675105485232, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI66933014, Length=248, Percent_Identity=34.2741935483871, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=32.3076923076923, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI32483357, Length=254, Percent_Identity=30.3149606299213, Blast_Score=104, Evalue=7e-23,
Organism=Homo sapiens, GI4758504, Length=256, Percent_Identity=33.203125, Blast_Score=104, Evalue=9e-23,
Organism=Homo sapiens, GI59889578, Length=225, Percent_Identity=34.6666666666667, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI10190704, Length=258, Percent_Identity=31.0077519379845, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI4503817, Length=195, Percent_Identity=32.3076923076923, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=33.6734693877551, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI5031737, Length=255, Percent_Identity=30.1960784313725, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI83715985, Length=256, Percent_Identity=31.25, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=28.2157676348548, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI4503301, Length=248, Percent_Identity=26.6129032258064, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI224922801, Length=181, Percent_Identity=33.7016574585635, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI20149619, Length=196, Percent_Identity=28.0612244897959, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI210032110, Length=192, Percent_Identity=28.125, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI109715829, Length=238, Percent_Identity=26.4705882352941, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI4504505, Length=254, Percent_Identity=27.5590551181102, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI142976729, Length=190, Percent_Identity=24.7368421052632, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=36.8627450980392, Blast_Score=145, Evalue=3e-36,
Organism=Escherichia coli, GI1787335, Length=240, Percent_Identity=35.4166666666667, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=34.6938775510204, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=34.9794238683128, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788459, Length=241, Percent_Identity=33.195020746888, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=33.0612244897959, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082160, Length=242, Percent_Identity=30.9917355371901, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=31.6, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=30.4347826086957, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786812, Length=254, Percent_Identity=29.1338582677165, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=30.4878048780488, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1789208, Length=245, Percent_Identity=30.6122448979592, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787820, Length=231, Percent_Identity=29.004329004329, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787526, Length=244, Percent_Identity=25, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=242, Percent_Identity=38.0165289256198, Blast_Score=136, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=36.734693877551, Blast_Score=127, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=36.9649805447471, Blast_Score=124, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=30.952380952381, Blast_Score=114, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=30, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=31.0606060606061, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17538182, Length=256, Percent_Identity=30.078125, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=32.1969696969697, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17562910, Length=268, Percent_Identity=30.9701492537313, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71994604, Length=251, Percent_Identity=29.8804780876494, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=30.9433962264151, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=31.3432835820896, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI115534694, Length=241, Percent_Identity=29.8755186721992, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=29.277566539924, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17560332, Length=275, Percent_Identity=29.0909090909091, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=29.6577946768061, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=31.9391634980989, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17567345, Length=193, Percent_Identity=31.0880829015544, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI72000259, Length=269, Percent_Identity=30.4832713754647, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=28.4090909090909, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17538486, Length=263, Percent_Identity=28.8973384030418, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=28.9473684210526, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=264, Percent_Identity=30.3030303030303, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=264, Percent_Identity=29.5454545454545, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=28.6259541984733, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17536651, Length=249, Percent_Identity=28.5140562248996, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=262, Percent_Identity=29.3893129770992, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=262, Percent_Identity=29.7709923664122, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17536025, Length=252, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17561272, Length=254, Percent_Identity=28.3464566929134, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=243, Percent_Identity=26.7489711934156, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17564282, Length=198, Percent_Identity=28.2828282828283, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71982365, Length=195, Percent_Identity=25.1282051282051, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=29.718875502008, Blast_Score=83, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6322861, Length=242, Percent_Identity=29.3388429752066, Blast_Score=74, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=37.2950819672131, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=32.2709163346614, Blast_Score=126, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=31.640625, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=32.9268292682927, Blast_Score=120, Evalue=9e-28,
Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=32.5396825396825, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24644339, Length=247, Percent_Identity=30.3643724696356, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI17737361, Length=253, Percent_Identity=29.2490118577075, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24643142, Length=244, Percent_Identity=31.9672131147541, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24644337, Length=260, Percent_Identity=30, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24640492, Length=198, Percent_Identity=26.7676767676768, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI281364892, Length=197, Percent_Identity=29.9492385786802, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007236, Length=257, Percent_Identity=28.0155642023346, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28571387, Length=202, Percent_Identity=29.2079207920792, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24641232, Length=201, Percent_Identity=29.3532338308458, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221331218, Length=193, Percent_Identity=32.1243523316062, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24665243, Length=193, Percent_Identity=32.1243523316062, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21358495, Length=196, Percent_Identity=27.0408163265306, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007234, Length=253, Percent_Identity=27.6679841897233, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221331216, Length=194, Percent_Identity=31.9587628865979, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356301, Length=193, Percent_Identity=28.4974093264249, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24665247, Length=194, Percent_Identity=31.9587628865979, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581726, Length=196, Percent_Identity=29.0816326530612, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI18859837, Length=244, Percent_Identity=28.6885245901639, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355631, Length=171, Percent_Identity=23.9766081871345, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007238, Length=182, Percent_Identity=29.6703296703297, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24663911, Length=201, Percent_Identity=28.3582089552239, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.53 [H]

Molecular weight: Translated: 26231; Mature: 26231

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLQGKVAIVTGGAQGQGAGISRAFVAEGARVVIADIAKEQGQELAAELGDTAHFIDHD
CCCCCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCC
VSDQASWTALVEDTGQRFGPVNVLANNAGILRFGEIEKMPVDEVELLWRVNQLGCFLGMN
CCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
AVSRTMREHGGGSIINASSVEGLAGMAGCTAYAATKWAIRGMTKCAAMELGPQGIRVNSV
HHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
HPGMIDTPMTRVHGGDAAMEYGAAKVPLRRVGYPDDIAPLYVYLASDESAYVNGAEIAID
CCCCCCCCHHEECCCCHHHHCCCCCCCHHHCCCCCCCCEEEEEEECCCCCEECCEEEEEE
GGVTATHAFGG
CCCEEECCCCC
>Mature Secondary Structure
MNRLQGKVAIVTGGAQGQGAGISRAFVAEGARVVIADIAKEQGQELAAELGDTAHFIDHD
CCCCCCEEEEEECCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCC
VSDQASWTALVEDTGQRFGPVNVLANNAGILRFGEIEKMPVDEVELLWRVNQLGCFLGMN
CCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
AVSRTMREHGGGSIINASSVEGLAGMAGCTAYAATKWAIRGMTKCAAMELGPQGIRVNSV
HHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
HPGMIDTPMTRVHGGDAAMEYGAAKVPLRRVGYPDDIAPLYVYLASDESAYVNGAEIAID
CCCCCCCCHHEECCCCHHHHCCCCCCCHHHCCCCCCCCEEEEEEECCCCCEECCEEEEEE
GGVTATHAFGG
CCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]